Miyakogusa Predicted Gene

Lj3g3v0950950.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0950950.2 Non Characterized Hit- tr|B4FL76|B4FL76_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,46.81,0.0000000000009,seg,NULL; NUFIP1,Nuclear fragile X mental
retardation-interacting protein 1, conserved domain,CUFF.41829.2
         (554 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g067220.2 | nuclear fragile X mental retardation-interacti...   432   e-121
Medtr2g067220.1 | nuclear fragile X mental retardation-interacti...   432   e-121

>Medtr2g067220.2 | nuclear fragile X mental retardation-interacting
           protein | HC | chr2:28119853-28113000 | 20130731
          Length = 552

 Score =  432 bits (1111), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/447 (59%), Positives = 305/447 (68%), Gaps = 36/447 (8%)

Query: 97  GQFCAP-PYPVQNM-NQQLP---MQVSNPSQVAPYGMHPGLRPRPMFGFPNQVPVSQPMF 151
            QFCAP PYP+QNM NQQLP   MQ  NP+Q  PYGM P    +PMFGFPNQVP +  M 
Sbjct: 101 AQFCAPGPYPMQNMMNQQLPPMQMQRQNPTQ-QPYGMQP--VQQPMFGFPNQVPHA--MV 155

Query: 152 PQNSIFSANPQMGHVPGNQVRPQIDPNEKKLVPP-NVNTNAFV-SSPFPSQQLQGNGSAP 209
           PQN +F+ NPQ G VPGNQ+RPQID NEK  VP  N N N FV   PFP QQLQGN + P
Sbjct: 156 PQNPMFNGNPQFGMVPGNQIRPQIDLNEKNRVPAGNGNANGFVPGGPFPPQQLQGN-NGP 214

Query: 210 VNPHLAQPHHTNNSQPSAFMNSNSQEKPNSNIKANVPNSNWKGPPSKNFKNKPSRXXXXX 269
           V      PH+ NN+Q SAF NS+ Q  PNSN+  N  NSNWKG P+KNFKNK +R     
Sbjct: 215 V------PHNANNAQGSAFRNSHPQVNPNSNMNTNFANSNWKGSPNKNFKNKQNRGGSQG 268

Query: 270 XXXKSKFVNINNGKRGNGFPEXXXXX--XXXXXXXXXLNSEELKQEAKRS--VTYSEQEI 325
              KSKF + N GKR   F +                LNS   KQE KRS  +TYSEQEI
Sbjct: 269 GFQKSKFNDTNKGKR---FSKEHKGKGPNNERAGHFGLNS---KQEPKRSFSLTYSEQEI 322

Query: 326 QQWREARRKNHPFKDNIQK-SEDQKDTKVIDRGVLQKELKEVLAKQAELGIEVAEIPSHY 384
           QQWREARRKNHP ++ I+K SE  KD+KVIDR +LQ+ELKEVLAKQAELGIEVAEIPS+Y
Sbjct: 323 QQWREARRKNHPSREKIEKQSEQSKDSKVIDRELLQRELKEVLAKQAELGIEVAEIPSYY 382

Query: 385 LKNSENQGFQTEGK-NSFTDKRKFQNKFNKKSDRRGRFGKRQKFSHNDISEKPALNKKKP 443
           L N  NQG Q+E K NSFTDKRKF+NK  +  DRR R  K+QKF+  D+ E    NKKKP
Sbjct: 383 LMNGTNQGLQSEDKKNSFTDKRKFKNKLMRNPDRRSRNNKKQKFADRDLLE----NKKKP 438

Query: 444 TLLEKLLSADIKRDKSHLLQVFRFMVMNSFFKDSPDKPLIYPSVKVKEIGSEGGCEEKHL 503
           TLL+KLLSADIKRDKSHL QVFRF+  NSFFKD PDKPL+YP V VKE+GSE    +KHL
Sbjct: 439 TLLQKLLSADIKRDKSHLFQVFRFITANSFFKDYPDKPLVYPPVSVKEMGSEVYGGKKHL 498

Query: 504 HTGKDALERGNEKTVQNIANHSIDNDH 530
             G+  LE G ++ VQ     S DN H
Sbjct: 499 QGGEAVLEHGTKEIVQKFVKGS-DNGH 524


>Medtr2g067220.1 | nuclear fragile X mental retardation-interacting
           protein | HC | chr2:28119862-28112939 | 20130731
          Length = 553

 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/448 (59%), Positives = 305/448 (68%), Gaps = 37/448 (8%)

Query: 97  GQFCAP-PYPVQNM-NQQLP---MQVSNPSQVAPYGMHPGLRPRPMFGFPNQVPVSQPMF 151
            QFCAP PYP+QNM NQQLP   MQ  NP+Q  PYGM P    +PMFGFPNQVP +  M 
Sbjct: 101 AQFCAPGPYPMQNMMNQQLPPMQMQRQNPTQ-QPYGMQP--VQQPMFGFPNQVPHA--MV 155

Query: 152 PQNSIFSANPQMGHVPGNQVRPQIDPNEKKLVPP-NVNTNAFV-SSPFPSQQLQGNGSAP 209
           PQN +F+ NPQ G VPGNQ+RPQID NEK  VP  N N N FV   PFP QQLQGN + P
Sbjct: 156 PQNPMFNGNPQFGMVPGNQIRPQIDLNEKNRVPAGNGNANGFVPGGPFPPQQLQGN-NGP 214

Query: 210 VNPHLAQPHHTNNSQPSAFMNSNSQEKPNSNIKANVPNSNWKGPPSKNFKNKPSRXXXXX 269
           V      PH+ NN+Q SAF NS+ Q  PNSN+  N  NSNWKG P+KNFKNK +R     
Sbjct: 215 V------PHNANNAQGSAFRNSHPQVNPNSNMNTNFANSNWKGSPNKNFKNKQNRGGSQG 268

Query: 270 XXXKSKFVNINNGKRGNGFPEXXXXX--XXXXXXXXXLNSEELKQEAKRS--VTYSEQEI 325
              KSKF + N GKR   F +                LNS   KQE KRS  +TYSEQEI
Sbjct: 269 GFQKSKFNDTNKGKR---FSKEHKGKGPNNERAGHFGLNS---KQEPKRSFSLTYSEQEI 322

Query: 326 QQWREARRKNHPFKDNIQK--SEDQKDTKVIDRGVLQKELKEVLAKQAELGIEVAEIPSH 383
           QQWREARRKNHP ++ I+K  SE  KD+KVIDR +LQ+ELKEVLAKQAELGIEVAEIPS+
Sbjct: 323 QQWREARRKNHPSREKIEKQQSEQSKDSKVIDRELLQRELKEVLAKQAELGIEVAEIPSY 382

Query: 384 YLKNSENQGFQTEGK-NSFTDKRKFQNKFNKKSDRRGRFGKRQKFSHNDISEKPALNKKK 442
           YL N  NQG Q+E K NSFTDKRKF+NK  +  DRR R  K+QKF+  D+ E    NKKK
Sbjct: 383 YLMNGTNQGLQSEDKKNSFTDKRKFKNKLMRNPDRRSRNNKKQKFADRDLLE----NKKK 438

Query: 443 PTLLEKLLSADIKRDKSHLLQVFRFMVMNSFFKDSPDKPLIYPSVKVKEIGSEGGCEEKH 502
           PTLL+KLLSADIKRDKSHL QVFRF+  NSFFKD PDKPL+YP V VKE+GSE    +KH
Sbjct: 439 PTLLQKLLSADIKRDKSHLFQVFRFITANSFFKDYPDKPLVYPPVSVKEMGSEVYGGKKH 498

Query: 503 LHTGKDALERGNEKTVQNIANHSIDNDH 530
           L  G+  LE G ++ VQ     S DN H
Sbjct: 499 LQGGEAVLEHGTKEIVQKFVKGS-DNGH 525