Miyakogusa Predicted Gene
- Lj3g3v0937880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0937880.1 Non Characterized Hit- tr|I1KTU7|I1KTU7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.32,0,MITOCHONDRIAL
DEAD BOX PROTEIN, PUTATIVE,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
DEAD,DNA/RNA helicas,CUFF.41681.1
(540 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 678 0.0
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 129 1e-29
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 120 3e-27
Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 117 3e-26
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 101 2e-21
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 97 4e-20
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 97 4e-20
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 96 7e-20
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 96 7e-20
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 94 3e-19
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 93 5e-19
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 92 1e-18
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 92 2e-18
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 85 1e-16
Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like prote... 85 2e-16
Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 85 2e-16
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 85 2e-16
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 84 3e-16
Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like prote... 84 3e-16
Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 84 3e-16
Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like prote... 84 4e-16
Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like prote... 84 4e-16
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 83 6e-16
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 83 7e-16
Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 83 8e-16
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 82 1e-15
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 82 1e-15
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 82 1e-15
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 80 4e-15
Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 80 4e-15
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 80 4e-15
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 80 6e-15
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 80 6e-15
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 79 1e-14
Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like prote... 79 1e-14
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 78 2e-14
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 78 3e-14
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 77 4e-14
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 77 4e-14
Medtr8g032230.1 | DEAD-box helicase family protein | HC | chr8:1... 77 4e-14
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 76 9e-14
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 76 9e-14
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 76 9e-14
Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like prote... 76 1e-13
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 74 3e-13
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 74 3e-13
Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 73 5e-13
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 73 5e-13
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 73 5e-13
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 73 7e-13
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 72 1e-12
Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 71 3e-12
Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 70 4e-12
Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 70 4e-12
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 70 4e-12
Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 70 5e-12
Medtr4g077370.1 | DEAD-box helicase family protein | LC | chr4:2... 69 1e-11
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 69 2e-11
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 69 2e-11
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 69 2e-11
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 69 2e-11
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 69 2e-11
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 69 2e-11
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 69 2e-11
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 69 2e-11
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 69 2e-11
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 69 2e-11
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 69 2e-11
Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 69 2e-11
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 68 2e-11
Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family pro... 68 2e-11
Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 67 3e-11
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 67 4e-11
Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like prote... 67 5e-11
Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like prote... 67 5e-11
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 67 6e-11
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 67 6e-11
Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like prote... 67 6e-11
Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like prote... 65 1e-10
Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like prote... 65 1e-10
Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like prote... 65 1e-10
Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like prote... 65 1e-10
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 65 2e-10
Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like prote... 64 3e-10
Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family pro... 64 4e-10
Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 64 5e-10
Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like prote... 63 6e-10
Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 62 1e-09
Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 62 1e-09
Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like prote... 62 2e-09
Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC | s... 60 6e-09
Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like prote... 59 1e-08
Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like prote... 57 7e-08
Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like prote... 56 8e-08
Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC | sc... 56 1e-07
Medtr6g040070.1 | DEAD/DEAH-box helicase | HC | chr6:14397151-14... 55 1e-07
Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 55 1e-07
Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like prote... 55 2e-07
Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 55 2e-07
Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 54 4e-07
Medtr1g103260.1 | fanconi anemia, complementation group M protei... 52 2e-06
Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 |... 51 4e-06
Medtr2g031570.1 | DEAD-box helicase family protein | LC | chr2:1... 50 4e-06
Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like prote... 49 9e-06
>Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:26668487-26670676 | 20130731
Length = 552
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/544 (66%), Positives = 417/544 (76%), Gaps = 17/544 (3%)
Query: 1 MRRALATSRFAWFHSSVHCRSQVEPHHGSLTLSSIGLHSET----AAASNKPNKPLG-ST 55
MRRAL SRFAWFHSSV C ++ H SLTLSS+G SE + NK KPLG S+
Sbjct: 19 MRRALLNSRFAWFHSSVKCLNK----HDSLTLSSVGFESEIEPKITSEENKV-KPLGLSS 73
Query: 56 SESLKNKGKPFGSNEREPVRVIEKQQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVPT 115
SE K K KPFG +E++ VR+ E+++ IE APFAAKSFSELG+P VL+ERL EGF VPT
Sbjct: 74 SEGFKVKRKPFGISEKKSVRIKERKE-IENAPFAAKSFSELGIPEVLIERLGKEGFNVPT 132
Query: 116 EVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLG 175
+VQ AAVPTILKN DVII+S+ GSGKTLAYLLPILS IGPL+ + +G GDGGE KKLG
Sbjct: 133 DVQSAAVPTILKNRDVIIQSYTGSGKTLAYLLPILSVIGPLKGENNEGGGDGGESGKKLG 192
Query: 176 IEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTP 235
+EA+IVAPSRE+GMQIV E EKILG +N++VVQQLVGG NR+RQEEAL+KNKPAIVVGTP
Sbjct: 193 VEAVIVAPSRELGMQIVREFEKILGMENRKVVQQLVGGANRTRQEEALKKNKPAIVVGTP 252
Query: 236 SRIAELSAARKLRTLGCRFXXXXXXXXXXXXXXRKDMHRMLEHVGRRSDAGADPNSNAER 295
RIAELSA+ KLR GC++ R+DMHR+LEHVGRRS GAD NS A++
Sbjct: 253 GRIAELSASGKLRAHGCQYLVLDEVDELLSFNFREDMHRLLEHVGRRS--GADHNSKAKK 310
Query: 296 AEHQLIMXXXXXXXXXXXXXXXWGCDPLLVRDNKVVPLETVTPAEPVKLXXXXXXXXXXX 355
E QLIM WG DPLLV+ K+VPLET++P EPVKL
Sbjct: 311 TERQLIMVSATVPFSVVRAAKSWGSDPLLVQAKKIVPLETLSP-EPVKLSPSSSSTPSVP 369
Query: 356 XXXXXXXVESLPPALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKL 415
VESLPPALKHYYCVVRLQHKVDTLRRCI+AL AK+VI FMNHTKQLKDVV KL
Sbjct: 370 SKAV---VESLPPALKHYYCVVRLQHKVDTLRRCIHALDAKFVIVFMNHTKQLKDVVFKL 426
Query: 416 EARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTD 475
EARG+KAAELHGDLG+L RST LKKFKNG+VRVLVT ELSARGLDVA+CDLVVNL+LPTD
Sbjct: 427 EARGVKAAELHGDLGKLGRSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTD 486
Query: 476 SIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGIPIPCCDIAERKLVVTAEDK 535
SIHYAHRAGR GRLGRNGTVLTIC++ EVFV++KL+KQL IPI CC+ E KL +T E+
Sbjct: 487 SIHYAHRAGRTGRLGRNGTVLTICEESEVFVVRKLKKQLEIPIACCNFVEGKLTITEEEN 546
Query: 536 ALST 539
AL +
Sbjct: 547 ALRS 550
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P KSFS+ P+ ++E +K GF PT +Q P LK D+I + GSGKTLAYL
Sbjct: 91 PKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYL 150
Query: 147 LPILSAIGPLRNKFPQGD-GDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKR 205
LP + + N P D GDG P L++AP+RE+ +QI E K G+ ++
Sbjct: 151 LPAIVHV----NAQPILDPGDG--PI------VLVLAPTRELAVQIQQEATK-FGASSRI 197
Query: 206 VVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRTLGCRFXXXXXXXXXXX 265
+ GG + Q L+K I++ TP R+ ++ +
Sbjct: 198 KSTCIYGGVPKGPQVRDLQKGV-EIIIATPGRLIDMLESNH------------------- 237
Query: 266 XXXRKDMHRMLEHVGRRSDAGADPNSNAERAEHQLIMXXXXXXXXXXXXXXXWGCD-PLL 324
R+ + +L+ R D G DP + + I+ W + L
Sbjct: 238 TNLRRVTYLVLDEADRMLDMGFDP-------QIRKIVSQIRPDRQTLYWSATWPKEVEQL 290
Query: 325 VRDNKVVPLETVTPAEPVKLXXXXXXXXXXXXXXXXXXVESLPPALKHYYCVVRLQHKVD 384
R P + + +E +K A+K Y +V + K D
Sbjct: 291 ARQFLYNPYKVIIGSEDLKANH----------------------AIKQYVDIVPEKQKYD 328
Query: 385 TLRRCIY-ALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKN 443
L + + + ++ FM+ K + +L G A +HGD + R +L +FK+
Sbjct: 329 KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKS 388
Query: 444 GDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTI 498
G ++ T+++ARGLDV V+N + P Y HR GR GR G GT T
Sbjct: 389 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTF 443
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 179/423 (42%), Gaps = 70/423 (16%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P K+F + G ++ +K +G+ PT +QC A+P +L D+I + GSGKT A++
Sbjct: 227 PKPVKTFEDCGFAPQIMGAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFV 286
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP++ I D E K+ G +I AP+RE+ QI +E +K + R
Sbjct: 287 LPMIVHI-----------MDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFAKAYGIR- 334
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRTLGCRFXXXXXXXXXXXX 266
V + GG ++ Q + L K IVV TP R+ ++ + L L +
Sbjct: 335 VSAVYGGMSKLEQFKEL-KAGCEIVVATPGRLIDMLKMKALAMLRATYL----------- 382
Query: 267 XXRKDMHRMLEHVGRRSDAGADPNSNA----ERAEHQLIMXXXXXXXXXXXXXXXWGCDP 322
+L+ R D G +P + R + Q ++ DP
Sbjct: 383 --------VLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDP 434
Query: 323 LLVRDNKV-VPLETVTPAEPVKLXXXXXXXXXXXXXXXXXXVESLPPALKHYYCVVRLQH 381
+ V +V + E +T V E LP + + +L
Sbjct: 435 IRVTVGEVGMANEDITQVVQV----------------IPSDSEKLP------WLLEKLHE 472
Query: 382 KVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKF 441
+D ++A + + ++ +L RG K A LHGD + +R IL+KF
Sbjct: 473 MIDQGDTLVFA----------SKKATVDEIEVQLGQRGFKVAALHGDKDQSSRMDILQKF 522
Query: 442 KNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLG-RNGTVLTICK 500
K+G VL+ T+++ARGLD+ VVN ++ D + HR GR GR G ++G T+
Sbjct: 523 KSGAYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLIT 582
Query: 501 DPE 503
E
Sbjct: 583 QKE 585
>Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:30630772-30640503 | 20130731
Length = 787
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 182/445 (40%), Gaps = 79/445 (17%)
Query: 93 FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSA 152
F LGL + +K +G+ VPT +Q +P IL DV+ + GSGKT A+L+P+L
Sbjct: 20 FETLGLNRDVFSGIKRKGYKVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLVPMLHR 79
Query: 153 IGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVG 212
L PQG G+ LI++P+R++ Q ++ K LG V LVG
Sbjct: 80 ---LNQHVPQG-----------GVRGLILSPTRDLAQQ-TLKFTKELGHFTDLRVSLLVG 124
Query: 213 GGNRSRQEEALRKNKPAIVVGTPSRIA-ELSAARKLRTLGCRFXXXXXXXXXXXXXXRKD 271
G + Q E L +N P I++ TP R+ LS + + +
Sbjct: 125 GDSMESQFEELAQN-PDIIIATPGRLMHHLSEVDDMSLRKVEYVVFDEADCLFGMGFAEQ 183
Query: 272 MHRMLEHVGRRSD----AGADPNSNAERAEHQLIMXXXXXXXXXXXXXXXWGCDPLLVRD 327
+H++L +G + P++ AE A+ L DP LVR
Sbjct: 184 LHQILAQLGENRQTLLFSATLPSALAEFAKAGL-------------------RDPRLVR- 223
Query: 328 NKVVPLETVTPAEPVKLXXXXXXXXXXXXXXXXXXVESLPPALKHYYCVVRLQHKVDTL- 386
+ LET + P LK + +R + K L
Sbjct: 224 ---LDLET-----------------------------KISPDLKLVFFTLRQEEKYAALL 251
Query: 387 ---RRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKN 443
R I + + H + + + +LE G++ + +GD+ + AR + +F++
Sbjct: 252 YLIRELIGSDEQTLIFVSTKHHVEFLNSLFQLE--GIRPSVCYGDMDQDARKEHVARFRS 309
Query: 444 GDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPE 503
+L+ T+++ARG+D+ D V+N + P + HR GR+ R GR GT + +
Sbjct: 310 RKTMLLIVTDIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAYSFLTAED 369
Query: 504 VFVLKKLQKQLGIPIPCCDIAERKL 528
+ L L L P+ E L
Sbjct: 370 MAYLLDLHLFLSKPVKAAPTEEEVL 394
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 190/456 (41%), Gaps = 66/456 (14%)
Query: 93 FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSA 152
F + + + ++ +K+ G+ T VQ A +P ILK DV+ K+ G+GKT+A+LLP +
Sbjct: 103 FDKCSVSPLSLKGVKDAGYEKMTIVQEATLPVILKGKDVLAKAKTGTGKTVAFLLP---S 159
Query: 153 IGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVG 212
I + P G P I L+V P+RE+ Q E K+L Q ++G
Sbjct: 160 IEVVVKSPPNNRGQNQTP-----ILVLVVCPTRELACQAAAEATKLLKYHPTIGAQVVIG 214
Query: 213 GGNRSRQEEALRKNKPAIVVGTPSRIAEL---SAARKLRTLGCRFXXXXXXXXXXXXXXR 269
G + S +++ ++KN I++ TP R+ + +A + +G + R
Sbjct: 215 GTSLSSEQKRIQKNPCQILIATPGRLKDHIANTAGFASKLMGVKALVLDEADQLLDMGFR 274
Query: 270 KDMHRMLEHVGRRSDAGADPNSNAERAEHQLIMXXXXXXXXXXXXXXXWGCDPLLVRDNK 329
KD+ +++ V ++ ++ A HQ+ C+ L +D +
Sbjct: 275 KDIEKIIASVPKQRQTLM-FSATIPDAVHQV-------------------CNVALKKDFE 314
Query: 330 VVPLETVTPAEPVKLXXXXXXXXXXXXXXXXXXVESLPPALKHY--YCVVRLQHKVDTLR 387
+ TV + + P KH+ V+ +H D +
Sbjct: 315 FI--NTVQEG-------------TEETHSQVRQMHLIAPLDKHFSLLSVILKEHIADDV- 358
Query: 388 RCIYALHAKYVIAFMNHTKQLKDVVCKLEAR-GMKAAELHGDLGELARSTILKKFKNGDV 446
Y + T + +V L + + E+H + R+ + +F+
Sbjct: 359 --------DYKVLVFCTTAMVTSLVANLLGKLNLNVREIHSRKNQSYRTRVSDEFRKSKR 410
Query: 447 RVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFV 506
+LVT+++SARG+D LVV + LP D Y HR GR GR G+ G + + E F
Sbjct: 411 LILVTSDVSARGVDYPDVSLVVQVGLPADKQQYIHRLGRTGRKGKEGKGILLLAPWEEFF 470
Query: 507 LKKLQKQLGI---PIPCCDIAERKLVVTAEDKALST 539
L K L I P+P D +K V ++ALS
Sbjct: 471 LDS-TKDLPIEKAPVPSVDPDTKKKV----ERALSN 501
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 190/458 (41%), Gaps = 66/458 (14%)
Query: 86 APFAAKS-FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLA 144
A F + S F E + + ++ +K+ G+ T VQ A +P IL+ DV+ K+ G+GKT+A
Sbjct: 99 ASFLSDSRFDECSVSPLSLKGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVA 158
Query: 145 YLLPILSAIGPLRNKFPQGD-GDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDN 203
+LLP + + K P D G P I L+V P+RE+ Q E K+L
Sbjct: 159 FLLPSIEVV----VKSPPSDPGQSQTP-----ILVLVVCPTRELARQAAAEATKLLKYHP 209
Query: 204 KRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE---LSAARKLRTLGCRFXXXXXX 260
Q ++GG +++ ++KN I+V TP R+ + +A +G +
Sbjct: 210 TIGAQVVIGGTKIVSEQKRIQKNPCQILVATPGRLKDHIAKTAGFASNLMGLKTFVIDEA 269
Query: 261 XXXXXXXXRKDMHRMLEHVGRRSDAGADPNSNAERAEHQLIMXXXXXXXXXXXXXXXWGC 320
RKD+ ++ V ++ ++ +A HQ+ C
Sbjct: 270 DRLLDMGFRKDIEEIITSVPKQRQTLMF-SATIPKAVHQV-------------------C 309
Query: 321 DPLLVRDNKVVPLETVTPAEPVKLXXXXXXXXXXXXXXXXXXVESLPPALKHY--YCVVR 378
+ L +D + + TV + + P KH+ V+
Sbjct: 310 NVALKKDYEFI--NTVQEG-------------TEETHSQVRQMHLIAPLDKHFSLLSVIL 354
Query: 379 LQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEAR-GMKAAELHGDLGELARSTI 437
+H D Y + T + +V L + + E++ + R+ +
Sbjct: 355 KEHIAD---------EVDYKVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKKQGFRNRV 405
Query: 438 LKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLT 497
+F+ +LVT+++SARG+D LVV L +P D Y HR GR GR+G+ G +
Sbjct: 406 SDEFRKSKRLILVTSDVSARGVDYPDVSLVVQLGIPADKELYIHRLGRTGRIGKEGKGIL 465
Query: 498 ICKDPEVFVLKKLQKQLGI---PIPCCD-IAERKLVVT 531
+ E F L K L I P+P D E+K+ +T
Sbjct: 466 LLAPWEEFFLAS-TKDLPIEKAPVPSVDPDTEKKVEMT 502
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 1/145 (0%)
Query: 369 ALKHYYC-VVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + + K+DTL L + F+N +++ + K+ +R + HG
Sbjct: 252 GIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 311
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 312 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 371
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQK 512
R GR G + + +L+ +QK
Sbjct: 372 RFGRKGVAINFVTKEDEGMLRDIQK 396
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 22/152 (14%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF +GL L+ + GF P+ +Q + K DVI ++ G+GKT + +L
Sbjct: 41 SFDAMGLAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGS--DNKRVVQQ 209
+ +AL++AP+RE+ QI EK++ + D V
Sbjct: 101 QL----------------DYNVTQCQALVLAPTRELAQQI----EKVMRALGDYLGVKVH 140
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
GG R+++ + +VVGTP R+ ++
Sbjct: 141 ACVGGTSVREDQRILSTGVHVVVGTPGRVFDM 172
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 1/145 (0%)
Query: 369 ALKHYYC-VVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + + K+DTL L + F+N +++ + K+ +R + HG
Sbjct: 269 GIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 328
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 329 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 388
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQK 512
R GR G + + +L+ +QK
Sbjct: 389 RFGRKGVAINFVTKEDEGMLRDIQK 413
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 22/152 (14%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF +GL L+ + GF P+ +Q + K DVI ++ G+GKT + +L
Sbjct: 58 SFDAMGLAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 117
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGS--DNKRVVQQ 209
+ +AL++AP+RE+ QI EK++ + D V
Sbjct: 118 QL----------------DYNVTQCQALVLAPTRELAQQI----EKVMRALGDYLGVKVH 157
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
GG R+++ + +VVGTP R+ ++
Sbjct: 158 ACVGGTSVREDQRILSTGVHVVVGTPGRVFDM 189
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 369 ALKHYYC-VVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + + K+DTL L + F+N +++ + K+ +R + HG
Sbjct: 252 GIKQFYVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 311
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 312 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 371
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQKQLGIPI 518
R GR G + + +L +QK + I
Sbjct: 372 RFGRKGVAINFVTTDDERMLSDIQKFYNVLI 402
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF +GL L+ + GF P+ +Q + +K DVI ++ G+GKT + IL
Sbjct: 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQ 100
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGS--DNKRVVQQ 209
Q D E +AL++AP+RE+ QI EK++ + D V
Sbjct: 101 ----------QLDYSVTE------CQALVLAPTRELAQQI----EKVMRALGDYLGVKVH 140
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLR 248
GG R+++ + + +VVGTP R+ ++ + LR
Sbjct: 141 ACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLR 179
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 369 ALKHYYCVV-RLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + + K++TL L + F+N +++ + K+ +R + HG
Sbjct: 252 GIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 311
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 312 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 371
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQKQLGIPI 518
R GR G + + +L +QK + I
Sbjct: 372 RFGRKGVSINFVTGEDARMLADIQKFYNVTI 402
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 32/165 (19%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF +GL L+ + GF P+ +Q + K DVI ++ G+GKT + IL
Sbjct: 41 SFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
+ D G + +AL++AP+RE+ QI EK++ R + +
Sbjct: 101 QL------------DYG----LVQCQALVLAPTRELAQQI----EKVM-----RALGDFL 135
Query: 212 G-------GGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRT 249
G GG R+++ + + VVGTP R+ ++ + LR+
Sbjct: 136 GVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRS 180
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Query: 369 ALKHYYCVV-RLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K ++ V R + K DTL L + F N +++ + K+ + +HG
Sbjct: 245 GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVSAMHG 304
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+ +F+ G RVL+TT++ ARGLDV + LV+N +LP + Y HR GR G
Sbjct: 305 DMPQRERDAIMGEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSG 364
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQKQLGIPI 518
R GR G + K ++ +L+ +++ I
Sbjct: 365 RFGRKGVAINFVKSDDIKILRDIEQYYSTQI 395
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 89 AAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLP 148
A SF E+G+ + L+ + GF P+ +Q AV I++ DVI ++ G+GKT L
Sbjct: 31 AIGSFEEMGIKDDLLRGIYQYGFEKPSAIQQRAVAPIIQGRDVIAQAQSGTGKTSMIALT 90
Query: 149 ILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV-V 207
+ + + ++ALIV+P+RE+ Q EK++ + + +
Sbjct: 91 VCQVVDTSVRE----------------VQALIVSPTRELASQT----EKVILTIGDFINI 130
Query: 208 QQLVGGGNRSRQEEALRKNKPA--IVVGTPSRIAELSAARKLRT 249
Q G +S E+ +RK + +V GTP R+ ++ R LRT
Sbjct: 131 QAHACIGGKSVGED-IRKLEHGVHVVSGTPGRVCDMIKRRTLRT 173
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 369 ALKHYYC-VVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + + K++TL L + F+N +++ + K+ R + HG
Sbjct: 252 GIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHG 311
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 312 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 371
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQK 512
R GR G + + +L +QK
Sbjct: 372 RFGRKGVAINFVTLEDARMLADIQK 396
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
++F +GL L+ + GF P+ +Q + +K DVI ++ G+GKT + IL
Sbjct: 40 ETFDAMGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGIL 99
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGS--DNKRVVQ 208
+ D G + +AL++AP+RE+ QI EK++ + D V
Sbjct: 100 QQL------------DYG----LVQCQALVLAPTRELAQQI----EKVMRALGDYLGVKV 139
Query: 209 QLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRT 249
GG R+++ + + +VVGTP R+ ++ + LR+
Sbjct: 140 HACVGGTSVREDQRILQTGVHVVVGTPGRVFDMLRRQSLRS 180
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 369 ALKHYYCVV-RLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + + K++TL L + F+N +++ + K+ R + HG
Sbjct: 236 GIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHG 295
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 296 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 355
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQK 512
R GR G + + +L +QK
Sbjct: 356 RFGRKGVAINFVTLEDARMLADIQK 380
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
++F +GL L+ + GF P+ +Q + +K DVI ++ G+GKT + IL
Sbjct: 24 ETFDAMGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGIL 83
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGS--DNKRVVQ 208
+ D G + +AL++AP+RE+ QI EK++ + D V
Sbjct: 84 QQL------------DYG----LVQCQALVLAPTRELAQQI----EKVMRALGDYLGVKV 123
Query: 209 QLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRT 249
GG R+++ + + +VVGTP R+ ++ + LR+
Sbjct: 124 HACVGGTSVREDQRILQTGVHVVVGTPGRVFDMLRRQSLRS 164
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Query: 379 LQHKVDTLRRCIYALHAKYVIAFMNHTKQLKD---VVCKLEARGMKAAELHGDLGELARS 435
+ H+ L C +K +I + TKQ ++ L G+KAAELHG+L + R
Sbjct: 371 VNHEAVLLAMCTKTFTSKVII--FSGTKQAAHRLRIIFGLS--GLKAAELHGNLTQAQRL 426
Query: 436 TILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTV 495
L++F+ V LV T+++ARGLD+ V+N P D Y HR GR R GR G+
Sbjct: 427 DALEQFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSA 486
Query: 496 LTICKDPEVFVLKKLQKQLGIPIPCCDIAERKLV 529
+T D + +LK + K+ G + +AE+ ++
Sbjct: 487 VTFVTDSDRSLLKAIAKRAGSKLKSRIVAEQAIL 520
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 88 FAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLL 147
F+A SF +L L L+ + G+A PT +Q A +P L D+ + GSGKT A+ L
Sbjct: 137 FSADSFLQLNLSRSLLLACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFAL 196
Query: 148 PILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQI---VMELEKILGSDNK 204
P L R F P I LI+ P+RE+ +Q+ + EL K +DN
Sbjct: 197 PTLE-----RLLF--------RPKGVHAIRVLILTPTRELAVQVHSMIEELAKF--TDNI 241
Query: 205 RVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRI 238
R L+ GG ++ +EA +++P IVV TP R+
Sbjct: 242 RCC--LIVGGVPTKGQEAALRSRPDIVVATPGRM 273
>Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:21899223-21892509 | 20130731
Length = 613
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 86/154 (55%), Gaps = 12/154 (7%)
Query: 88 FAAKSFSELGLPNVLVERLKNE-GFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
FA+ SFS LGL L ++L+ GF PT +Q A+P +L ++ + G+GKT+AYL
Sbjct: 40 FASCSFSSLGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYL 99
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
PI+ + + + DG AL++ P+RE+ +Q+ L+K+L + V
Sbjct: 100 APIIHHLQSYDKRVQRSDGTF----------ALVLVPTRELCLQVHEILQKLLHRFHWIV 149
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
++GG +RS+++ LRK +I++ TP R+ +
Sbjct: 150 PGYIMGGESRSKEKARLRKG-ISILIATPGRLLD 182
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 419 GMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIH 478
G K LHG++ + R+T + FK +L++T++SARGLD ++ + P ++
Sbjct: 385 GCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATE 444
Query: 479 YAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQ 513
Y HR GR RLG G L + E+ L+ L+K
Sbjct: 445 YVHRVGRTARLGERGESLLFLQPSEIDYLQDLEKH 479
>Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:21843191-21840034 | 20130731
Length = 276
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 86/154 (55%), Gaps = 12/154 (7%)
Query: 88 FAAKSFSELGLPNVLVERLKNE-GFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
FA+ SFS LGL L ++L+ GF PT +Q A+P +L ++ + G+GKT+AYL
Sbjct: 37 FASCSFSSLGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYL 96
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
PI+ + + + D G AL++ P+RE+ +Q+ L+K+L + V
Sbjct: 97 APIIHHLQSYDKRVQRSD----------GTFALVLVPTRELCLQVHEILQKLLHRFHWIV 146
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
++GG +RS+++ LRK +I++ TP R+ +
Sbjct: 147 PGYIMGGESRSKEKARLRKG-ISILIATPGRLLD 179
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%)
Query: 402 MNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDV 461
TK+ D + ++ + LHGD+ ++ R L F+NG VLV T++++RGLD+
Sbjct: 331 FTQTKRDADRISHGMSKSIPCEALHGDISQIQRERTLAGFRNGHFNVLVATDVASRGLDI 390
Query: 462 AKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLG 515
DLV++ ELP +S + HR+GR GR G+ GT + + + L+ +++ +G
Sbjct: 391 PNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVYTQDQSRTLRTIERDVG 444
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 14/186 (7%)
Query: 94 SELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAI 153
++LG+ +V L+ +G +Q A + ++ D+I ++ G+GKTLA+ +PI+ I
Sbjct: 83 AKLGISQDIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKI 142
Query: 154 GPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGG 213
+F G G +P AL++AP+RE+ Q+ E + + N + V G
Sbjct: 143 ----IQFNAKHGRGKDPL------ALVLAPTRELAKQVEKEFYE--AAPNLDTI--CVYG 188
Query: 214 GNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRTLGCRFXXXXXXXXXXXXXXRKDMH 273
G Q+ I VGTP RI +L L +F ++D+
Sbjct: 189 GTPISQQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKEVQFVILDEADQMLQVGFQEDVE 248
Query: 274 RMLEHV 279
++LE +
Sbjct: 249 KILERL 254
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 64/111 (57%)
Query: 419 GMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIH 478
G+KAAELHG+L + R L++F+ V LV T+++ARGLD+ V+N P D
Sbjct: 420 GLKAAELHGNLTQAQRLGALEEFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTS 479
Query: 479 YAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGIPIPCCDIAERKLV 529
Y HR GR R GR G+ +T D + +LK + K+ G + +AE+ ++
Sbjct: 480 YVHRVGRTARAGRAGSAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSIL 530
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 88 FAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLL 147
F+A SF +L L L+ + G++ PT +Q A +P L D+ + GSGKT A+ L
Sbjct: 148 FSADSFLQLNLSRPLLRACEVLGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFAL 207
Query: 148 PILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVV 207
P L R F P + I LI+ P+RE+ Q+ ++ + + R
Sbjct: 208 PTLE-----RLLF--------RPKRVHAIRVLILTPTRELAAQVQSMIKSLSQFTDIRCC 254
Query: 208 QQLVGGGNRSRQEEALRKNKPAIVVGTPSRI 238
+VGG + QE ALR ++P IVV TP R+
Sbjct: 255 -LIVGGLSTKEQEVALR-SRPDIVVATPGRM 283
>Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890321-18881902 | 20130731
Length = 610
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 86/154 (55%), Gaps = 12/154 (7%)
Query: 88 FAAKSFSELGLPNVLVERLKNE-GFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
FA+ SFS LGL L ++L+ GF PT VQ A+P +L ++ + G+GKT+AYL
Sbjct: 37 FASCSFSSLGLHQTLCDQLRERMGFEGPTLVQAQAIPVVLSGRHALVNAATGTGKTIAYL 96
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
PI+ + + + DG AL++ P+RE+ +Q+ L+K+L + V
Sbjct: 97 APIIHHLQSYDKRIQRSDGTF----------ALVLVPTRELCLQVHEILQKLLHRFHWIV 146
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
++GG +RS+++ LRK +I++ TP R+ +
Sbjct: 147 PGYIMGGESRSKEKARLRKG-ISILIATPGRLLD 179
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 419 GMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIH 478
G K LHG++ + R+T + FK +L++T++SARGLD ++ + P ++
Sbjct: 382 GCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATE 441
Query: 479 YAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQ 513
Y HR GR RLG G L + E+ L+ L+K
Sbjct: 442 YVHRVGRTARLGERGESLLFLQPSEIEYLQDLEKH 476
>Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:20527189-20518464 | 20130731
Length = 438
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 328 NKVVPLETVTPAEPVKLXXXXXXXXXXXXXXXXXXVESLPPALKHYYCVVRLQHKVDTLR 387
NKV L+ V PVK+ S LK Y + +HK L
Sbjct: 197 NKVEKLQRVCLRNPVKIETSSKY--------------STVDTLKQQYRFLPAKHKDCYLV 242
Query: 388 RCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVR 447
+ + + F + + L G+KA ++G + + R L KFK+GD
Sbjct: 243 YILSEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCN 302
Query: 448 VLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVL 507
+L+ T++++RGLD+ D+V+N ++PT+S Y HR GR R GR+G +++ E+
Sbjct: 303 ILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWY 362
Query: 508 KKLQKQLGIPIP 519
+++K +G +P
Sbjct: 363 VQIEKLIGKKLP 374
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 20/152 (13%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
KSF +LGLP LVE + G+ P E+Q A+P L+ D+I + GSGKT A+ LPIL
Sbjct: 9 KSFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPIL 68
Query: 151 SAI--GPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQ 208
A+ P N F A +++P+RE+ +QI + E LGS+
Sbjct: 69 HALLEAPRPNHF----------------FACVMSPTRELAIQISEQFEA-LGSEIGVKCA 111
Query: 209 QLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
LVGG + +Q + K P I+VGTP R+ +
Sbjct: 112 VLVGGIDMVQQSVKIAK-LPHIIVGTPGRVLD 142
>Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641167-30650711 | 20130731
Length = 438
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
LK Y + +HK L + + + F + + L G+KA ++G
Sbjct: 224 TLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGH 283
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R L KFK+GD +L+ T++++RGLD+ D+V+N ++PT+S Y HR GR R
Sbjct: 284 MSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTAR 343
Query: 489 LGRNGTVLTICKDPEVFVLKKLQKQLGIPIP 519
GR+G +++ E+ +++K +G +P
Sbjct: 344 AGRSGVAISLVNQYELEWYVQIEKLIGKKLP 374
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 20/152 (13%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
KSF +LGLP LVE + G+ P ++Q A+P L+ D+I + GSGKT A+ LPIL
Sbjct: 9 KSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFALPIL 68
Query: 151 SAI--GPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQ 208
A+ P N F A +++P+RE+ +QI + E LGS+
Sbjct: 69 HALLEAPRPNHF----------------FACVMSPTRELAIQISEQFEA-LGSEIGVKCA 111
Query: 209 QLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
LVGG + +Q + K P I+VGTP R+ +
Sbjct: 112 VLVGGIDMVQQSVKIAK-LPHIIVGTPGRVLD 142
>Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641166-30650890 | 20130731
Length = 438
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
LK Y + +HK L + + + F + + L G+KA ++G
Sbjct: 224 TLKQQYRFLPAKHKDCYLVYILTEMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGH 283
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R L KFK+GD +L+ T++++RGLD+ D+V+N ++PT+S Y HR GR R
Sbjct: 284 MSQPKRLGALNKFKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTAR 343
Query: 489 LGRNGTVLTICKDPEVFVLKKLQKQLGIPIP 519
GR+G +++ E+ +++K +G +P
Sbjct: 344 AGRSGVAISLVNQYELEWYVQIEKLIGKKLP 374
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 20/152 (13%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
KSF +LGLP LVE + G+ P ++Q A+P L+ D+I + GSGKT A+ LPIL
Sbjct: 9 KSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFALPIL 68
Query: 151 SAI--GPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQ 208
A+ P N F A +++P+RE+ +QI + E LGS+
Sbjct: 69 HALLEAPRPNHF----------------FACVMSPTRELAIQISEQFEA-LGSEIGVKCA 111
Query: 209 QLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
LVGG + +Q + K P I+VGTP R+ +
Sbjct: 112 VLVGGIDMVQQSVKIAK-LPHIIVGTPGRVLD 142
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 67/114 (58%)
Query: 402 MNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDV 461
TK+ D + + A+ +K LHGD+ + R L F+N VLV T++++RGLD+
Sbjct: 340 FTQTKRDADRLSHIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDI 399
Query: 462 AKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLG 515
DLV++ ELP +S + HR+GR GR G+ GT + + + + +K +++ +G
Sbjct: 400 PNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTENQSRDVKTIERDVG 453
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 14/149 (9%)
Query: 93 FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSA 152
++LG+ +V L +G A +Q A + ++ D+I ++ G+GKTLA+ +PIL
Sbjct: 91 IAKLGISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDK 150
Query: 153 IGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVG 212
I KF +G +P AL++AP+RE+ Q+ E + + N ++ +
Sbjct: 151 I----IKFNAKNGKRRDPL------ALVLAPTRELARQVEKEFKD--AAPNLEIIS--LY 196
Query: 213 GGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
GG +Q+ + + IVVGTP R+ +L
Sbjct: 197 GGMPIQQQISKLGSGVDIVVGTPGRVIDL 225
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 67/114 (58%)
Query: 402 MNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDV 461
TK+ D + + A+ +K LHGD+ + R L F+N VLV T++++RGLD+
Sbjct: 340 FTQTKRDADRLSHIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDI 399
Query: 462 AKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLG 515
DLV++ ELP +S + HR+GR GR G+ GT + + + + +K +++ +G
Sbjct: 400 PNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTENQSRDVKTIERDVG 453
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 14/149 (9%)
Query: 93 FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSA 152
++LG+ +V L +G A +Q A + ++ D+I ++ G+GKTLA+ +PIL
Sbjct: 91 IAKLGISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDK 150
Query: 153 IGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVG 212
I KF +G +P AL++AP+RE+ Q+ E + + N ++ +
Sbjct: 151 I----IKFNAKNGKRRDPL------ALVLAPTRELARQVEKEFKD--AAPNLEIIS--LY 196
Query: 213 GGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
GG +Q+ + + IVVGTP R+ +L
Sbjct: 197 GGMPIQQQISKLGSGVDIVVGTPGRVIDL 225
>Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:54963018-54968467 | 20130731
Length = 480
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 26/176 (14%)
Query: 84 EPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTL 143
+ P + + +P+ L++R++ G+ +PT VQ A+P + D I+ + GSGKTL
Sbjct: 74 DTVPITLRQLCQSHVPDQLLQRMEEVGYVMPTPVQKQALPRLFSGRDCILHAQTGSGKTL 133
Query: 144 AYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKIL---- 199
AYLL I S I ++ F +AL++ P+RE+GMQ V ++ +IL
Sbjct: 134 AYLLLIYSIISTRKSSF----------------QALVLVPTRELGMQ-VTKVARILAAKP 176
Query: 200 ----GSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRTLG 251
G + L+ GG R + + PAIVV T + ++ R+L +LG
Sbjct: 177 TGVEGEQRSCTIMALLDGGTLRRHKSWFKAEPPAIVVATVESLCQM-LERQLFSLG 231
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Query: 363 VESLPPALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNH-------------TKQLK 409
VE +P L H + V ++ K+ TL I + + I F++ T +
Sbjct: 304 VEPMPSRLSHRFIVCDIKRKLQTLLSLIQSDAPESGIIFVSEQSEKSKKAGNSPSTSLVI 363
Query: 410 DVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVN 469
D + + L D+ +R+ L + + G +LV T+++ARG+D + + N
Sbjct: 364 DFLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYN 423
Query: 470 LELPTDSIHYAHRAGRIGR---LGRNGTVLTICKDPEVFVLKKLQKQLGI 516
+LP +I Y HRAGR R N TV +I E FVL++ + +L
Sbjct: 424 YDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVSQERFVLQRYENELSF 473
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
+ +Y V + KV L L I F N +++ + K+ G +H
Sbjct: 360 GITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 419
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R+ + F+NG R LV T+L RG+D+ ++V+N + P +S Y HR GR GR
Sbjct: 420 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGR 479
Query: 489 LGRNGTVLTICKDPEVFVLKKLQKQLGIPI 518
G G + + + F L +++++LG I
Sbjct: 480 FGHLGLAVNLVTYEDRFNLYRIEQELGTEI 509
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 26/157 (16%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
F + L L+ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P
Sbjct: 148 GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPA 207
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGM---QIVMELEKILGSDNKRV 206
L I +N I+ +I+ P+RE+ + Q+ EL K L
Sbjct: 208 LEKIDQDKNV----------------IQVVILVPTRELALQTSQVCKELGKHLQ------ 245
Query: 207 VQQLVGGGNRSRQEEALRKNKPA-IVVGTPSRIAELS 242
+Q +V G S +++ +R +P ++VGTP RI +L+
Sbjct: 246 IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLA 282
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
+ +Y V + KV L L I F N +++ + K+ G +H
Sbjct: 353 GITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 412
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R+ + F+NG R LV T+L RG+D+ ++V+N + P +S Y HR GR GR
Sbjct: 413 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGR 472
Query: 489 LGRNGTVLTICKDPEVFVLKKLQKQLGIPI 518
G G + + + F L +++++LG I
Sbjct: 473 FGHLGLAVNLITYEDRFNLYRIEQELGTEI 502
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 26/157 (16%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
F + L L+ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P
Sbjct: 141 GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPA 200
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGM---QIVMELEKILGSDNKRV 206
L I D D I+ +I+ P+RE+ + Q+ EL K L
Sbjct: 201 LEKI----------DQDNN------IIQVVILVPTRELALQTSQVCKELGKHLQ------ 238
Query: 207 VQQLVGGGNRSRQEEALRKNKPA-IVVGTPSRIAELS 242
+Q +V G S +++ +R +P ++VGTP RI +L+
Sbjct: 239 IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLA 275
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
+ +Y V + KV L L I F N +++ + K+ G +H
Sbjct: 351 GITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 410
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R+ + F+NG R LV T+L RG+D+ ++V+N + P +S Y HR GR GR
Sbjct: 411 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGR 470
Query: 489 LGRNGTVLTICKDPEVFVLKKLQKQLGIPI 518
G G + + + F L +++++LG I
Sbjct: 471 FGHLGLAVNLITYEDRFNLYRIEQELGTEI 500
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 26/157 (16%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
F + L L+ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P
Sbjct: 139 GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPA 198
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGM---QIVMELEKILGSDNKRV 206
L I D D I+ +I+ P+RE+ + Q+ EL K L
Sbjct: 199 LEKI----------DQDNN------IIQVVILVPTRELALQTSQVCKELGKHLQ------ 236
Query: 207 VQQLVGGGNRSRQEEALRKNKPA-IVVGTPSRIAELS 242
+Q +V G S +++ +R +P ++VGTP RI +L+
Sbjct: 237 IQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLA 273
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
I F+ + +V L A+G+ A LHG + R L F++ +LV T++++R
Sbjct: 341 TIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASR 400
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLG 515
GLDV V+NL+LP + Y HR GR GR G G + D ++F++ ++K +
Sbjct: 401 GLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTDRDMFLVSNIRKAIA 458
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 102 LVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS---AIGPLRN 158
+++ + + PT +Q A+P L D++ + GSGKT A+ +P++ A P+R
Sbjct: 96 IMKDIAYHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIR- 154
Query: 159 KFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSR 218
+GDG AL++AP+RE+ QI E++ S +VGG N +
Sbjct: 155 ---RGDGP----------LALVLAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEK 201
Query: 219 QEEALRKNKPAIVVGTPSRIAE 240
Q LR I V TP R +
Sbjct: 202 QRSELRAGV-EIAVATPGRFID 222
>Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348854-14341230 | 20130731
Length = 684
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF LGL + ++ ++ G VPTE+QC VP +L V++ S GSGKTLAYLLP++
Sbjct: 110 SFEGLGLGDEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQ 169
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
L + Q +G +P + A+++ P+RE+ Q+ + I S + R +V
Sbjct: 170 ----LLRRDEQMNGLVLKPKRP---RAVVLCPTRELSEQVFRVAKAI--SHHARFRCTMV 220
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
GG R R +E N +VVGTP RI +
Sbjct: 221 SGGGRLRPQEESLSNPIDMVVGTPGRILQ 249
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 380 QHKVDTLRRCIYALHAK--YVIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTI 437
++K+D+L + + AK V+ F N + V LE + HG++ R
Sbjct: 350 ENKLDSLLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVEN 409
Query: 438 LKKFK--NGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTV 495
L KFK N D LV T+L+ARGLD+ D V+ + P +SI Y HR GR R+G G +
Sbjct: 410 LNKFKSNNDDCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKI 468
Query: 496 LTICKDPEVFVLKKLQKQL 514
++ + + K+++ +
Sbjct: 469 TSLVTKKDYSLATKIEEAI 487
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
I F+ + +V L A+G+ A LHG + R L F++ +LV T++++R
Sbjct: 372 TIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASR 431
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLG 515
GLDV V+NL+LP + Y HR GR GR G G + D ++F++ ++K +
Sbjct: 432 GLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTDRDMFLVSNIRKAIA 489
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 85 PAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLA 144
PAP +SF+++ L +++ + + PT +Q A+P L D++ + GSGKT A
Sbjct: 112 PAPI--ESFNDMCLHPSIMKDIAYHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAA 169
Query: 145 YLLPILS---AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGS 201
+ +P++ A P+R +GDG AL++AP+RE+ QI E++ S
Sbjct: 170 FTIPMIQHCLAQPPIR----RGDGP----------LALVLAPTRELAQQIEKEVQAFSRS 215
Query: 202 DNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
+VGG N +Q LR I V TP R +
Sbjct: 216 LESFKTAIVVGGTNIEKQRSELRAGV-EIAVATPGRFID 253
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 375 CVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELAR 434
V Q +++T+ R +I F + TK++ D + + R AA +HGD + R
Sbjct: 391 TYVEKQRRLETILRS--QDQGSKIIIFCS-TKKMCDQLARNLTRQFGAAAIHGDKSQADR 447
Query: 435 STILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGT 494
+L +F++G VLV T+++ARGLDV +VVN + PT Y HR GR GR G G
Sbjct: 448 DHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGI 507
Query: 495 VLTICKDPEV 504
T D +
Sbjct: 508 AYTFFGDQDA 517
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P SF+ G P+ ++ ++N GF+ PT +Q + P L++ D++ + GSGKTL YL
Sbjct: 160 PPPVTSFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYL 219
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP + N K+G L+++P+RE+ QI E K S R+
Sbjct: 220 LPAFIHLKRTNNN------------AKMGPTVLVLSPTRELATQIQDEAVKF--SKTSRI 265
Query: 207 V-QQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
L GG + Q + + + IVV TP R+ ++ R++
Sbjct: 266 ACTCLYGGAPKGPQLKDIDRGA-DIVVATPGRLNDILEMRRI 306
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 375 CVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELAR 434
V Q +++T+ R +I F + TK++ D + + R AA +HGD + R
Sbjct: 391 TYVEKQRRLETILRS--QDQGSKIIIFCS-TKKMCDQLARNLTRQFGAAAIHGDKSQADR 447
Query: 435 STILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGT 494
+L +F++G VLV T+++ARGLDV +VVN + PT Y HR GR GR G G
Sbjct: 448 DHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGI 507
Query: 495 VLTICKDPEV 504
T D +
Sbjct: 508 AYTFFGDQDA 517
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P SF+ G P+ ++ ++N GF+ PT +Q + P L++ D++ + GSGKTL YL
Sbjct: 160 PPPVTSFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYL 219
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP + N K+G L+++P+RE+ QI E K S R+
Sbjct: 220 LPAFIHLKRTNNN------------AKMGPTVLVLSPTRELATQIQDEAVKF--SKTSRI 265
Query: 207 V-QQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
L GG + Q + + + IVV TP R+ ++ R++
Sbjct: 266 ACTCLYGGAPKGPQLKDIDRGA-DIVVATPGRLNDILEMRRI 306
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 370 LKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCK-LEARGMKAAELHGD 428
+ + +++ K L+R + L+ K I F+N TK+ D + K L+ G + LHG
Sbjct: 524 ISQHVIMMKESEKNYKLQRLLDELNDKTAIVFVN-TKKSADFLAKNLDKEGYRVTTLHGG 582
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ R L+ F+ VLV T+++ RG+D+ V+N ++P + Y HR GR GR
Sbjct: 583 KSQDQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGR 642
Query: 489 LGRNG--TVLTICKDPEVFV-LKKLQKQLGIPIP 519
G+ G T +D +VF LK++ Q P+P
Sbjct: 643 AGKTGVATTFLTLQDTDVFYELKQMLIQSNSPVP 676
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P +S+ E L L++ ++ G+ P+ +Q AA+P L+ DVI + GSGKT A++
Sbjct: 282 PRPMRSWVESKLSQELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFV 341
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+LS I L P + + E G A+++AP+RE+ QI E K +V
Sbjct: 342 LPMLSYITRLP---PISEENEAE-----GPYAVVMAPTRELAQQIEDETVKFAQYMGIKV 393
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRI 238
V +VGG + Q +R+ IV+ TP R+
Sbjct: 394 V-SIVGGQSIEEQGFKIRQG-CEIVIATPGRL 423
>Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:17617607-17621556 | 20130731
Length = 450
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 369 ALKHYY--CVVRLQHKVDTLRRCIYAL--HAKYVIAFMNHTKQLKDVVCKLEARGMKAAE 424
A+K Y C L K++ ++ I+ L + I F+ K + L G +
Sbjct: 265 AVKQYKVKCTDELA-KIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKSLVDFGYEVTS 323
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPT---------- 474
+ G L R TI+K+FK+G +VL++T++ +RG D + +LV+N +LP
Sbjct: 324 IQGALQTEERDTIIKEFKDGLTQVLISTDVLSRGFDQDQVNLVINYDLPLKYTRGQEPEP 383
Query: 475 DSIHYAHRAGRIGRLGRNGTVLT-ICKDPEVFVLKKLQKQLGI 516
D Y HR GR GR GR G V IC + E V+ K+++ GI
Sbjct: 384 DCEVYLHRVGRAGRFGRKGAVFNLICHESEQMVMSKIEEHFGI 426
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 10/171 (5%)
Query: 80 QQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTIL-KNHDVIIKSWKG 138
++ I+ + A ++EL L L++ + GF PT +Q A VP + DVI + G
Sbjct: 153 EENIDETEYYA--WNELRLHPRLMKAIHKLGFKEPTPIQKACVPAAAHQGKDVIGAAETG 210
Query: 139 SGKTLAYLLPILSAIGPLRNKFPQGDG-DGGEPAKKLG----IEALIVAPSREIGMQIVM 193
SGKTLA+ LPIL + R K G +G E A+K + +LI+AP+RE+ +Q+
Sbjct: 211 SGKTLAFGLPILQRLLEEREKAESISGVNGEEAAEKYATTGLLRSLIIAPTRELALQVAK 270
Query: 194 ELEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAA 244
L+ + N RV + GG ++E L K +P IVV TP R+ EL ++
Sbjct: 271 HLKAVAKHINVRVT--AIVGGILPEKQERLLKARPEIVVATPGRLWELMSS 319
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Query: 390 IYALHAK-YVIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRV 448
I +H + I F L+ + L G+ LH + + AR + +F+ D +
Sbjct: 469 ILTVHGQGRTIVFCTSIAALRHISSILRILGVNVWTLHAQMQQRARLKAMDRFRENDNGI 528
Query: 449 LVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLK 508
LV T+++ARGLD+ VV+ +LP + Y HR+GR R G + + E
Sbjct: 529 LVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPKETSKFA 588
Query: 509 KLQKQLG 515
L K
Sbjct: 589 SLCKSFS 595
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 18/212 (8%)
Query: 76 VIEKQQQI----EPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDV 131
+I+KQ I E P K+F ++ P+ +++ LK +G PT +Q +P IL D+
Sbjct: 125 LIQKQWHIIVNGEEIPPPIKNFKDMRFPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDM 184
Query: 132 IIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQI 191
I ++ GSGKTL ++LP++ P G+G P LI+ PSRE+ Q
Sbjct: 185 IGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEG--PF------GLIICPSRELARQT 236
Query: 192 VMELEKILGSDNKRVVQQL-----VGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARK 246
+E+ L + +L +GG + Q E ++K IVV TP R+ ++ A +K
Sbjct: 237 YEVIEEFLLPLKEAGYPELRPLLCIGGIDMRSQLEIVKKGV-HIVVATPGRLKDMLAKKK 295
Query: 247 LRTLGCRFXXXXXXXXXXXXXXRKDMHRMLEH 278
+ CR+ D+ + +H
Sbjct: 296 MNLDNCRYLTLDEADRLVDLGFEDDIREVFDH 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
V+ F + + D+ L +G++A +HG + R + FK G VLV T+++++
Sbjct: 398 VLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKAGKKDVLVATDVASK 457
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTI 498
GLD V+N ++P + +Y HR GR GR G+ G T
Sbjct: 458 GLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 498
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
++ Y VV K L + + + I TK+L D + + R AA +HGD
Sbjct: 713 SITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKKLCDQLARSIGRTFGAAAIHGD 772
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ R +L +F+ G +LV T+++ARGLD+ +V+N + P Y HR GR GR
Sbjct: 773 KSQGERDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGR 832
Query: 489 LGRNGTVLTICKD 501
G G T +
Sbjct: 833 AGATGVAYTFFSE 845
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 85 PAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLA 144
P PF +F G P +++ + + GF+ PT +Q P L+ D++ + GSGKTL
Sbjct: 491 PPPFM--TFDSTGFPPEILQEVCSAGFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLG 548
Query: 145 YLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNK 204
YL+P + RN G L++AP+RE+ QI E+ K S ++
Sbjct: 549 YLMPAFILLRQRRNN------------SLNGPTVLVLAPTRELATQIQEEVFKFARS-SR 595
Query: 205 RVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
L GG ++ Q + L + IVV TP R+ ++ +K+
Sbjct: 596 VSCTCLYGGAPKALQLKELDRGA-DIVVATPGRLNDILEMKKI 637
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
++ Y VV K L + + + I TK+L D + + R AA +HGD
Sbjct: 713 SITQYVEVVPQMEKQRRLEQILRSQERGSKIIIFCSTKKLCDQLARSIGRTFGAAAIHGD 772
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ R +L +F+ G +LV T+++ARGLD+ +V+N + P Y HR GR GR
Sbjct: 773 KSQGERDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGR 832
Query: 489 LGRNGTVLTICKD 501
G G T +
Sbjct: 833 AGATGVAYTFFSE 845
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 85 PAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLA 144
P PF +F G P +++ + + GF+ PT +Q P L+ D++ + GSGKTL
Sbjct: 491 PPPFM--TFDSTGFPPEILQEVCSAGFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLG 548
Query: 145 YLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNK 204
YL+P + RN G L++AP+RE+ QI E+ K S ++
Sbjct: 549 YLMPAFILLRQRRNN------------SLNGPTVLVLAPTRELATQIQEEVFKFARS-SR 595
Query: 205 RVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
L GG ++ Q + L + IVV TP R+ ++ +K+
Sbjct: 596 VSCTCLYGGAPKALQLKELDRGA-DIVVATPGRLNDILEMKKI 637
>Medtr8g032230.1 | DEAD-box helicase family protein | HC |
chr8:12119817-12118310 | 20130731
Length = 171
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 77/150 (51%), Gaps = 17/150 (11%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
KSF +LGL +LVE + G+ P E+Q A+P L+ DVI S GSGKT A+ LPIL
Sbjct: 9 KSFKDLGLDELLVEAFEKMGWKNPKEIQLKAIPQALQGKDVIGFSQTGSGKTGAFALPIL 68
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQL 210
A+ A + G A +++P+RE+ Q+ + E LGS+ L
Sbjct: 69 HAL---------------LDAPRHGFFACVISPTRELAYQVPEQFEA-LGSEIGVKCAVL 112
Query: 211 VGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
VG + +Q + K P I VGTP R+ +
Sbjct: 113 VGQMDMVQQSIEIAKG-PDIFVGTPGRVLD 141
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 370 LKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDL 429
+ + +++ K L R + L+ K I F+N TK+ D + K G + LHG
Sbjct: 486 ISQHVIMMKESEKNYNLHRLLDQLNDKTAIVFVN-TKKSADFLAK-NLEGYRVTTLHGGK 543
Query: 430 GELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRL 489
+ R L+ F+ VLV T+++ RG+D+ V+N ++P + Y HR GR GR
Sbjct: 544 SQDQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 603
Query: 490 GRNG--TVLTICKDPEVFV-LKKLQKQLGIPIP 519
G+ G T +D +VF LK++ Q P+P
Sbjct: 604 GKTGVATTFLTLQDTDVFYELKQMLIQSNSPVP 636
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P +S+ E L +++ ++ G+ P+ +Q A++P L+ DVI + GSGKT A++
Sbjct: 244 PRPIRSWVESKLSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFV 303
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+LS I L P + + E G A+++AP+RE+ QI E K +V
Sbjct: 304 LPMLSYITRLP---PISEENEAE-----GPYAVVMAPTRELAQQIEDETVKFAQYMGIKV 355
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRI 238
V +VGG + Q +R+ IV+ TP R+
Sbjct: 356 V-SIVGGQSIEEQGFKIRQG-CEIVIATPGRL 385
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 370 LKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDL 429
+ + +++ K L R + L+ K I F+N TK+ D + K G + LHG
Sbjct: 486 ISQHVIMMKESEKNYNLHRLLDQLNDKTAIVFVN-TKKSADFLAK-NLEGYRVTTLHGGK 543
Query: 430 GELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRL 489
+ R L+ F+ VLV T+++ RG+D+ V+N ++P + Y HR GR GR
Sbjct: 544 SQDQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 603
Query: 490 GRNG--TVLTICKDPEVFV-LKKLQKQLGIPIP 519
G+ G T +D +VF LK++ Q P+P
Sbjct: 604 GKTGVATTFLTLQDTDVFYELKQMLIQSNSPVP 636
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P +S+ E L +++ ++ G+ P+ +Q A++P L+ DVI + GSGKT A++
Sbjct: 244 PRPIRSWVESKLSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFV 303
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+LS I L P + + E G A+++AP+RE+ QI E K +V
Sbjct: 304 LPMLSYITRLP---PISEENEAE-----GPYAVVMAPTRELAQQIEDETVKFAQYMGIKV 355
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRI 238
V +VGG + Q +R+ IV+ TP R+
Sbjct: 356 V-SIVGGQSIEEQGFKIRQG-CEIVIATPGRL 385
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 370 LKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDL 429
+ + +++ K L R + L+ K I F+N TK+ D + K G + LHG
Sbjct: 486 ISQHVIMMKESEKNYNLHRLLDQLNDKTAIVFVN-TKKSADFLAK-NLEGYRVTTLHGGK 543
Query: 430 GELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRL 489
+ R L+ F+ VLV T+++ RG+D+ V+N ++P + Y HR GR GR
Sbjct: 544 SQDQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 603
Query: 490 GRNG--TVLTICKDPEVFV-LKKLQKQLGIPIP 519
G+ G T +D +VF LK++ Q P+P
Sbjct: 604 GKTGVATTFLTLQDTDVFYELKQMLIQSNSPVP 636
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P +S+ E L +++ ++ G+ P+ +Q A++P L+ DVI + GSGKT A++
Sbjct: 244 PRPIRSWVESKLSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFV 303
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+LS I L P + + E G A+++AP+RE+ QI E K +V
Sbjct: 304 LPMLSYITRLP---PISEENEAE-----GPYAVVMAPTRELAQQIEDETVKFAQYMGIKV 355
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRI 238
V +VGG + Q +R+ IV+ TP R+
Sbjct: 356 V-SIVGGQSIEEQGFKIRQG-CEIVIATPGRL 385
>Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:27069344-27076281 | 20130731
Length = 491
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 369 ALKHYYCVVRLQH-KVDTLRRCIYAL--HAKYVIAFM---NHTKQLKDVVCKLEARGMKA 422
A+K Y +V + K+D ++ I+ L + I F+ N K L + L G +
Sbjct: 302 AVKQYKVLVPDELVKIDVIKNYIFELGENVGQTIIFVRTRNSAKMLHKALVDL---GYEV 358
Query: 423 AELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPT-------- 474
+ G L + R I+K+FK+G +VL++T++ ARG D + +LV+N +LP
Sbjct: 359 TSIQGALDHVDRDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYAAEYTH 418
Query: 475 ------DSIHYAHRAGRIGRLGRNGTVLT-ICKDPEVFVLKKLQKQLGIPI 518
D Y HR GR GR GR G V IC + + L K++K G I
Sbjct: 419 GHEQEPDYEVYLHRVGRAGRFGRKGAVFNLICGERDEKTLSKIEKHFGTYI 469
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%)
Query: 419 GMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIH 478
G A +HGD + R L+ FK G+ +LV T+++ARGLD+ + VVN +LP D
Sbjct: 436 GFPATCIHGDRTQQEREQALRSFKTGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDD 495
Query: 479 YAHRAGRIGRLGRNGTVLTICKDPEVFVLKKL 510
Y HR GR GR G+ G D + + K L
Sbjct: 496 YVHRIGRTGRAGKMGLATAFFNDSNLSMAKPL 527
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 17/184 (9%)
Query: 60 KNKGKPFGSNEREPVRVIEKQQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQC 119
+N G F + + PV + E P +F+E+ L + L + +K + PT VQ
Sbjct: 127 ENTGINFDAYDDIPV-----ETSGENVPPPVNTFAEIDLGDALNQNIKRCKYVKPTPVQR 181
Query: 120 AAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEP--AKKLGIE 177
A+P L D++ + GSGKT A+ PI+S I L ++ Q P A+
Sbjct: 182 YAIPISLAGRDLMACAQTGSGKTAAFCFPIISGI--LTEQYAQ------RPRVARTAYPL 233
Query: 178 ALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSR 237
ALI++P+RE+ QI E +K +VV GG ++Q L + I+V TP R
Sbjct: 234 ALILSPTRELSCQIHDEAKKFSYQTGVKVVVAY-GGAPITQQLRELERGV-DILVATPGR 291
Query: 238 IAEL 241
+ +L
Sbjct: 292 LVDL 295
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 84 EPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTL 143
E P K+F ++ P+ +++ LK +G PT +Q +P IL D+I ++ GSGKTL
Sbjct: 139 EDIPPPIKNFKDMRFPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTL 198
Query: 144 AYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKIL---- 199
++LP++ + P G+G LI+ PS E+ Q +E+ L
Sbjct: 199 VFVLPMIMMAMQEEIRMPIVPGEGP--------FGLIICPSWELARQTYEVIEQFLLPLK 250
Query: 200 --GSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRTLGCRFXXX 257
G R + L GG R + + K IVV TP R+ ++ A +K+ CR+
Sbjct: 251 EAGYPELRPL--LCIGGIDMRSQLKIVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTL 308
Query: 258 XXXXXXXXXXXRKDMHRMLEH 278
D+ + +H
Sbjct: 309 DEADRLVDPGFEDDIREVFDH 329
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
V+ F + + ++ L +G++A +HGD + R + FK G VLV T+++++
Sbjct: 400 VLIFCENKADVDNIHEYLLLKGVEAVAIHGDKDQEDREYAISSFKTGKKDVLVATDIASK 459
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTI 498
GLD V+N ++P + +Y HR GR GR G+ G T
Sbjct: 460 GLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 500
>Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6241938-6240697 | 20130731
Length = 325
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 369 ALKHYYC-VVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + K++TL + I F+N +++ ++ K+ +R +H
Sbjct: 163 GIKQFYVNVDEEKWKLETLYDIYTTKFITHCIVFVNTERKVDWLMDKMRSRYYTVLTIHD 222
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I++ F++G ++L+TT+ GLDV + LV+N +LPT +Y HR G
Sbjct: 223 DMDQNTRDIIVRNFQSGSPQILITTDPLVYGLDVQEVSLVINYDLPTLPENYLHRICHKG 282
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQK 512
R GR G + + +L +QK
Sbjct: 283 RFGRKGVAINFVTLDDFRMLSDIQK 307
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%)
Query: 422 AAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAH 481
A +HGD + R L+ FK+G+ +LV T+++ARGLD+ VVN +LP D Y H
Sbjct: 431 ATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
Query: 482 RAGRIGRLGRNGTVLTICKDPEVFVLKKLQ 511
R GR GR G+ G + + + LQ
Sbjct: 491 RIGRTGRAGKKGLATAFFNENNTSMARSLQ 520
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 55 TSESLKNKGKPFGSNEREPVRVIEKQQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVP 114
T E +N G F + E PV E P P +F+E+ L L + ++ + P
Sbjct: 113 TQEEQENTGINFDAYEDIPV---ETSGGNVPPP--VNTFAEIDLGEALNQNIRRCKYVKP 167
Query: 115 TEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAI--GPLRNKFPQGDGDGGEPAK 172
T VQ A+P L D++ + GSGKT A+ PI+S I G + P+G +
Sbjct: 168 TPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRG-------VR 220
Query: 173 KLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVV 232
+ AL+++P+RE+ MQI E K RVV GG ++Q L + I+V
Sbjct: 221 TVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAY-GGAPINQQLRELERGV-DILV 278
Query: 233 GTPSRIAEL 241
TP R+ +L
Sbjct: 279 ATPGRLVDL 287
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%)
Query: 422 AAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAH 481
A +HGD + R L+ FK+G+ +LV T+++ARGLD+ VVN +LP D Y H
Sbjct: 431 ATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 490
Query: 482 RAGRIGRLGRNGTVLTICKDPEVFVLKKLQ 511
R GR GR G+ G + + + LQ
Sbjct: 491 RIGRTGRAGKKGLATAFFNENNTSMARSLQ 520
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 55 TSESLKNKGKPFGSNEREPVRVIEKQQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVP 114
T E +N G F + E PV E P P +F+E+ L L + ++ + P
Sbjct: 113 TQEEQENTGINFDAYEDIPV---ETSGGNVPPP--VNTFAEIDLGEALNQNIRRCKYVKP 167
Query: 115 TEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAI--GPLRNKFPQGDGDGGEPAK 172
T VQ A+P L D++ + GSGKT A+ PI+S I G + P+G +
Sbjct: 168 TPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRG-------VR 220
Query: 173 KLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVV 232
+ AL+++P+RE+ MQI E K RVV GG ++Q L + I+V
Sbjct: 221 TVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAY-GGAPINQQLRELERGV-DILV 278
Query: 233 GTPSRIAEL 241
TP R+ +L
Sbjct: 279 ATPGRLVDL 287
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 93 FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSA 152
F + + + ++ +K+ G+ T VQ A +P ILK DV+ K+ G+GKT+A+LLP +
Sbjct: 202 FDQCSVSPLSLKGIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEV 261
Query: 153 IGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVG 212
+ K P D D P I L++ P+RE+ Q E K+L VQ ++G
Sbjct: 262 V----VKSPPSDRDQRRPP----IFVLVICPTRELACQAAAEATKLLKYHPTIGVQVVIG 313
Query: 213 GGNRSRQEEALRKNKPAIVVGTPSRI---AELSAARKLRTLGCRFXXXXXXXXXXXXXXR 269
G + +++ ++ N I+V TP R+ E +A R +G + R
Sbjct: 314 GTRLALEQKRMQANPCQILVATPGRLRDHIENTAGFASRLMGVKSLVLDEADHLLDMGFR 373
Query: 270 KDMHRMLEHV 279
KD+ +++ +
Sbjct: 374 KDIEKIIAAI 383
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 405 TKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKC 464
T+ + D++ +L + E+H + R+ + +F+ +LVT+++SARG+D
Sbjct: 471 TRLVADLLGEL---NLNVREIHSRKPQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDV 527
Query: 465 DLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGI---PIPCC 521
LVV + LP D Y HR GR GR G+ G + + E F L K L I P+P
Sbjct: 528 TLVVQVGLPADKQQYIHRLGRTGRKGKEGQGILLLAPWEEFFLAT-AKDLPIVKAPVPLV 586
Query: 522 DIAERKLVVTAEDKALST 539
D +K V ++ALS
Sbjct: 587 DPDTKKKV----ERALSN 600
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
++ F K V +L G A +HGD + R +L +FK+G ++ T+++AR
Sbjct: 449 ILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAAR 508
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTI 498
GLDV VVN + P+ Y HR GR GR G GT +
Sbjct: 509 GLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSF 549
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P ++F E P+ ++ + GF PT +Q P L D+I + GSGKTL+YL
Sbjct: 197 PKPIRAFHEANFPDYCLDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYL 256
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP + + + + QG+G L++AP+RE+ +QI E K N R
Sbjct: 257 LPAIVHVS-AQPRLVQGEGP----------VVLVLAPTRELAVQIQQEAMKFGSRSNIRC 305
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAAR 245
+ GG + Q LR IV+ TP R+ ++ A+
Sbjct: 306 T-CIYGGAPKGPQIRDLRMGV-EIVIATPGRLIDMLEAQ 342
>Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:20125418-20119486 | 20130731
Length = 681
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 422 AAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAH 481
A LHGD+ + R LK F++G LV T ++ARGLD+ L++ E P D Y H
Sbjct: 379 ARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIH 438
Query: 482 RAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGI 516
R+GR GR G G V + DP + K++++ GI
Sbjct: 439 RSGRTGRAGNTG-VAVMLYDPRRSNIAKIEREAGI 472
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 117 VQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGI 176
+Q TIL D++ ++ G GKTLA++LPIL ++ K + G G P+
Sbjct: 128 IQAMTFNTILDGSDLVGRARTGQGKTLAFVLPILESLTNGPAKSVRKTGYGRVPS----- 182
Query: 177 EALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPS 236
+++ P+RE+ Q+ + E + GS + GG QE LR+ IV+GTP
Sbjct: 183 -VIVLLPTRELANQVYADFE-LYGSSLGLSACAVYGGAPYGAQETKLRRGVD-IVIGTPG 239
Query: 237 RIAE 240
RI +
Sbjct: 240 RIKD 243
>Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:40632868-40627375 | 20130731
Length = 619
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
V+ F+ ++ K++ +L ++ +H DL + R + F+ G VL+ T++ AR
Sbjct: 375 VLVFLQSKERAKELYGELAFDNIRVDVIHSDLSQEERENAVDNFRAGKTWVLIATDVVAR 434
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLG 515
G+D + V+N + P + Y HR GR GR GR+G +T + ++ L+ + +
Sbjct: 435 GMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEEDIPFLRNVSNLMA 492
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 21/126 (16%)
Query: 85 PAPFAAKSFSELGL----PNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSG 140
P+P +SF EL P+ L+ +L GF PT +Q A+P +L++ + + GSG
Sbjct: 125 PSPL--QSFDELKTRYKCPSYLLWKLAELGFREPTPIQRQAIPVLLQDRECFACAPTGSG 182
Query: 141 KTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILG 200
KTLA++ P+L + + K G+ A+I+ SRE+ Q E +K+
Sbjct: 183 KTLAFVCPMLMKL---------------KAHAKGGVRAVIICHSRELSGQTYRECKKLAK 227
Query: 201 SDNKRV 206
+ R+
Sbjct: 228 GEKFRI 233
>Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:37010922-37003111 | 20130731
Length = 604
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
+SF ELGL LV L + PT +Q A+P IL+ DV+ ++ GSGKTLAYLLP+L
Sbjct: 25 RSFEELGLDARLVRALLKKRIEKPTPIQHVAIPLILEGKDVVARAKTGSGKTLAYLLPLL 84
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKIL 199
K + D KKL ++APSRE+ QI +E++ +L
Sbjct: 85 Q-------KLFTANVD----RKKLAPNVFVLAPSRELCQQIYVEVKSLL 122
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 383 VDTLRRCIYALHAKYVIAFMNHTK---QLKDVVCKLEARGMKAAELHGDLGELARSTILK 439
VD LRR + + F+ K L++ +C++ A +HGD ++ R L+
Sbjct: 389 VDLLRRNVVNGKLALTLVFVETKKGADALENWLCRIN---FPAIAIHGDKVQMERERALR 445
Query: 440 KFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNG 493
FK G ++V T++++RGLD+ V+N +LP D Y HR GR GR G++G
Sbjct: 446 SFKRGLTPIMVATDVASRGLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGQSG 499
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 84 EPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTL 143
E P F+E L L ++ + PT VQ A+P + D++ + GSGKT
Sbjct: 132 ENVPPPVNLFAETELHEDLKNNIERCKYVKPTPVQRYAIPIAVAGRDLMACAQTGSGKTA 191
Query: 144 AYLLPILSAIGPLR---NKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILG 200
A+ PI+S I R P+G GG + ALI++P+RE+ QI E K
Sbjct: 192 AFCFPIISGIMKERLASGLLPRG---GGVDSDVAFPTALILSPTRELSCQIHAEACKFAH 248
Query: 201 SDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
++ +V GG Q+ + + I+V TP R+ +L
Sbjct: 249 QTGVKIA--VVYGGAPIGQQLRILERGVDILVATPGRLVDL 287
>Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:27664451-27658107 | 20130731
Length = 513
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 18/150 (12%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
+FS+LGL V+ K G P VQ +P IL VI GSGKT A+ LPIL
Sbjct: 53 TFSDLGLSEWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFALPILQ 112
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
+ G+ AL+V P+RE+ Q+ + + LGS + + +V
Sbjct: 113 RLA----------------EHTFGVFALVVTPTRELAFQLAEQF-RALGSSLRLRIAVVV 155
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
GG + RQ + L +P +V+ TP RI L
Sbjct: 156 GGMDMLRQTKELVA-RPHLVIATPGRIKVL 184
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 390 IYALHA---------KYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKK 440
+Y LH + I F++ + + LE +AA L+ + R L
Sbjct: 282 VYLLHILSKMEDMGIRSAIVFVSTCRDCHRLNLMLEVLDQEAAALYSFRSQAQRLEALHD 341
Query: 441 FKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICK 500
FK+G V VL+ T+++ RGLD+ DLV+N ++P Y HR GR R GR G L++
Sbjct: 342 FKSGKVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVT 401
Query: 501 DPEVFVLKKLQ 511
+V ++++++
Sbjct: 402 QNDVDLIREIE 412
>Medtr4g077370.1 | DEAD-box helicase family protein | LC |
chr4:29630577-29632466 | 20130731
Length = 446
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 18/147 (12%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SFS+LGL +V G P VQ +P +L+ VI GSGKT A+ LPIL
Sbjct: 250 SFSDLGLSEWMVRGCDKLGMQSPRPVQRHCIPKVLEGRHVIGIDKTGSGKTAAFALPILQ 309
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
+G G+ AL++ P+RE+ +Q+ + ILGS + ++ +V
Sbjct: 310 RLG----------------ETPFGVFALVLTPTRELAVQLAHQF-WILGSSLRLILTVVV 352
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRI 238
GG ++ Q + L +P +V+ TP R+
Sbjct: 353 GGLDKRIQAKQLVA-RPNLVIATPERL 378
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 37/149 (24%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SFS+LGL V+ K G P VQ +P +L+ DV+ GSGKT A+ LPIL
Sbjct: 2 SFSDLGLSEWTVQNCKKLGMQTPRRVQQHCIPKVLEGRDVVGIDETGSGKTAAFALPILQ 61
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIE--ALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
+ E K G+ AL++ P+RE+ +Q+ Q
Sbjct: 62 RL--------------AEHPKPFGVYVFALVLTPTRELAIQL---------------ADQ 92
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRI 238
+ G+ +L P +V+ TP R+
Sbjct: 93 FLALGS------SLLPTSPHLVIATPERL 115
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
++ F++ + + L G LHG + R + + FK+ +LV T ++AR
Sbjct: 753 ILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAAR 812
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL 514
GLDV + +LV+N ++P Y HR GR GR GR G +T + + L K L
Sbjct: 813 GLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKAL 869
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P KS+++ GL + +++ +K F P +Q A+P I+ D I + GSGKTLA++
Sbjct: 499 PKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFV 558
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG P LI+AP+RE+ QI ++ K R
Sbjct: 559 LPMLRHI---KDQPPVVVGDG--PI------GLIMAPTRELVQQIHSDIRKFTKVMGIRC 607
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V V GG+ Q+ + K IVV TP R+ ++
Sbjct: 608 VP--VYGGSGVAQQISELKRGTEIVVCTPGRMIDI 640
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
++ F++ + + L G LHG + R + + FK+ +LV T ++AR
Sbjct: 753 ILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAAR 812
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL 514
GLDV + +LV+N ++P Y HR GR GR GR G +T + + L K L
Sbjct: 813 GLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKAL 869
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P KS+++ GL + +++ +K F P +Q A+P I+ D I + GSGKTLA++
Sbjct: 499 PKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFV 558
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG P LI+AP+RE+ QI ++ K R
Sbjct: 559 LPMLRHI---KDQPPVVVGDG--PI------GLIMAPTRELVQQIHSDIRKFTKVMGIRC 607
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V V GG+ Q+ + K IVV TP R+ ++
Sbjct: 608 VP--VYGGSGVAQQISELKRGTEIVVCTPGRMIDI 640
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
++ F++ + + L G LHG + R + + FK+ +LV T ++AR
Sbjct: 753 ILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAAR 812
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL 514
GLDV + +LV+N ++P Y HR GR GR GR G +T + + L K L
Sbjct: 813 GLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKAL 869
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P KS+++ GL + +++ +K F P +Q A+P I+ D I + GSGKTLA++
Sbjct: 499 PKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFV 558
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG P LI+AP+RE+ QI ++ K R
Sbjct: 559 LPMLRHI---KDQPPVVVGDG--PI------GLIMAPTRELVQQIHSDIRKFTKVMGIRC 607
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V V GG+ Q+ + K IVV TP R+ ++
Sbjct: 608 VP--VYGGSGVAQQISELKRGTEIVVCTPGRMIDI 640
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
++ F++ + + L G LHG + R + + FK+ +LV T ++AR
Sbjct: 753 ILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAAR 812
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL 514
GLDV + +LV+N ++P Y HR GR GR GR G +T + + L K L
Sbjct: 813 GLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKAL 869
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P KS+++ GL + +++ +K F P +Q A+P I+ D I + GSGKTLA++
Sbjct: 499 PKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFV 558
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG P LI+AP+RE+ QI ++ K R
Sbjct: 559 LPMLRHI---KDQPPVVVGDG--PI------GLIMAPTRELVQQIHSDIRKFTKVMGIRC 607
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V V GG+ Q+ + K IVV TP R+ ++
Sbjct: 608 VP--VYGGSGVAQQISELKRGTEIVVCTPGRMIDI 640
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
++ F++ + + L G LHG + R + + FK+ +LV T ++AR
Sbjct: 753 ILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAAR 812
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL 514
GLDV + +LV+N ++P Y HR GR GR GR G +T + + L K L
Sbjct: 813 GLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKAL 869
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P KS+++ GL + +++ +K F P +Q A+P I+ D I + GSGKTLA++
Sbjct: 499 PKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFV 558
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG P LI+AP+RE+ QI ++ K R
Sbjct: 559 LPMLRHI---KDQPPVVVGDG--PI------GLIMAPTRELVQQIHSDIRKFTKVMGIRC 607
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V V GG+ Q+ + K IVV TP R+ ++
Sbjct: 608 VP--VYGGSGVAQQISELKRGTEIVVCTPGRMIDI 640
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
++ F++ + + L G LHG + R + + FK+ +LV T ++AR
Sbjct: 753 ILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAAR 812
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL 514
GLDV + +LV+N ++P Y HR GR GR GR G +T + + L K L
Sbjct: 813 GLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKAL 869
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P KS+++ GL + +++ +K F P +Q A+P I+ D I + GSGKTLA++
Sbjct: 499 PKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFV 558
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG P LI+AP+RE+ QI ++ K R
Sbjct: 559 LPMLRHI---KDQPPVVVGDG--PI------GLIMAPTRELVQQIHSDIRKFTKVMGIRC 607
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V V GG+ Q+ + K IVV TP R+ ++
Sbjct: 608 VP--VYGGSGVAQQISELKRGTEIVVCTPGRMIDI 640
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
++ F++ + + L G LHG + R + + FK+ +LV T ++AR
Sbjct: 753 ILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAAR 812
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL 514
GLDV + +LV+N ++P Y HR GR GR GR G +T + + L K L
Sbjct: 813 GLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKAL 869
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P KS+++ GL + +++ +K F P +Q A+P I+ D I + GSGKTLA++
Sbjct: 499 PKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFV 558
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG P LI+AP+RE+ QI ++ K R
Sbjct: 559 LPMLRHI---KDQPPVVVGDG--PI------GLIMAPTRELVQQIHSDIRKFTKVMGIRC 607
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V V GG+ Q+ + K IVV TP R+ ++
Sbjct: 608 VP--VYGGSGVAQQISELKRGTEIVVCTPGRMIDI 640
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
++ F++ + + L G LHG + R + + FK+ +LV T ++AR
Sbjct: 753 ILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAAR 812
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL 514
GLDV + +LV+N ++P Y HR GR GR GR G +T + + L K L
Sbjct: 813 GLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKAL 869
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P KS+++ GL + +++ +K F P +Q A+P I+ D I + GSGKTLA++
Sbjct: 499 PKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFV 558
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG P LI+AP+RE+ QI ++ K R
Sbjct: 559 LPMLRHI---KDQPPVVVGDG--PI------GLIMAPTRELVQQIHSDIRKFTKVMGIRC 607
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V V GG+ Q+ + K IVV TP R+ ++
Sbjct: 608 VP--VYGGSGVAQQISELKRGTEIVVCTPGRMIDI 640
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
++ F++ + + L G LHG + R + + FK+ +LV T ++AR
Sbjct: 753 ILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAAR 812
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL 514
GLDV + +LV+N ++P Y HR GR GR GR G +T + + L K L
Sbjct: 813 GLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKAL 869
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P KS+++ GL + +++ +K F P +Q A+P I+ D I + GSGKTLA++
Sbjct: 499 PKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFV 558
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG P LI+AP+RE+ QI ++ K R
Sbjct: 559 LPMLRHI---KDQPPVVVGDG--PI------GLIMAPTRELVQQIHSDIRKFTKVMGIRC 607
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V V GG+ Q+ + K IVV TP R+ ++
Sbjct: 608 VP--VYGGSGVAQQISELKRGTEIVVCTPGRMIDI 640
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
++ F++ + + L G LHG + R + + FK+ +LV T ++AR
Sbjct: 753 ILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAAR 812
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL 514
GLDV + +LV+N ++P Y HR GR GR GR G +T + + L K L
Sbjct: 813 GLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKAL 869
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P KS+++ GL + +++ +K F P +Q A+P I+ D I + GSGKTLA++
Sbjct: 499 PKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFV 558
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG P LI+AP+RE+ QI ++ K R
Sbjct: 559 LPMLRHI---KDQPPVVVGDG--PI------GLIMAPTRELVQQIHSDIRKFTKVMGIRC 607
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V V GG+ Q+ + K IVV TP R+ ++
Sbjct: 608 VP--VYGGSGVAQQISELKRGTEIVVCTPGRMIDI 640
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 390 IYALHAKY-------VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFK 442
+ AL KY V+ F+ + + V L+ G KA + GD + R+ L FK
Sbjct: 340 LLALLEKYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWKAVSISGDKSQHERTKALSLFK 399
Query: 443 NGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTI 498
NG +++ T+++ARGLD+ ++V+N P Y HR GR GR G+ G T
Sbjct: 400 NGSCPLMIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVAHTF 455
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 19/177 (10%)
Query: 68 SNEREPVRVIEKQQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILK 127
S EP+ V K E K F + GLP ++E K GF P+ +Q A P +L
Sbjct: 81 SASDEPIVVTGKNAGDEKYT-PVKRFEDSGLPENVLECCK--GFEKPSPIQSRAWPFLLD 137
Query: 128 NHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREI 187
D+I + GSGKTLA+ +P + + + + +G G P L+++P+RE+
Sbjct: 138 GRDLIGIAATGSGKTLAFGIPAIMHV--MNKRKSKGSSKGRNPL------CLMLSPTREL 189
Query: 188 GMQIVMELEKILGSDNKRVVQQ---LVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
QI +L K + L GG + Q AL K+ IV+GTP RI +L
Sbjct: 190 AQQI----SDVLCDAGKSCGVESVCLYGGTPKGAQISAL-KSGIDIVIGTPGRIQDL 241
>Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:55283621-55286718 | 20130731
Length = 537
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 88 FAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLL 147
F+ KSF +G + ++E L N P+ +Q + P ++ II GSGKTLAYL+
Sbjct: 128 FSLKSFKGIGCADFMIESLHNLSLTRPSNIQAMSFPPVIAGKSCIIADQSGSGKTLAYLV 187
Query: 148 PILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVV 207
PI I LR + QG + L LI+AP+ E+ Q+ I S
Sbjct: 188 PI---IQRLRQQELQGLHKSSSQSPTL----LILAPTAELASQVFHNCRSISKSGVVPFK 240
Query: 208 QQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
LV GG R + + +++ TP R L
Sbjct: 241 SMLVTGGFRQKTQLDTLNQGVDVLIATPGRFLFL 274
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF+ LP+ L++ ++ G+ +PT VQ A+P L ++++ + GSGK+ ++L+PI+S
Sbjct: 140 SFASCNLPDKLLQNIEAAGYEMPTPVQMQAIPAALVGKNMLVLADTGSGKSASFLIPIIS 199
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
R + D +P A+++ P+RE+ +Q V E K+LG +V
Sbjct: 200 RCASHRLMYV---SDNKKPL------AMVLTPTRELSIQ-VEEHAKLLGKGLPFKTALVV 249
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
GG +RQ +++ ++VGTP R+ +L
Sbjct: 250 GGDAMARQLYRIQQGV-ELIVGTPGRLVDL 278
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 417 ARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDS 476
+ G+KA +HG+ R I++ F G+ V+V T + RG+D+ V+ ++P
Sbjct: 408 STGVKAVSIHGEKSMTERREIMQSFMVGEFPVVVATGVLGRGVDLLGVRQVIVFDMPNSI 467
Query: 477 IHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKL 510
Y H+ GR R+G G + D V +L
Sbjct: 468 NEYVHQIGRASRMGEEGQAIVFVNDENKNVFPEL 501
>Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10126329 | 20130731
Length = 458
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 86 APFAAKS-FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLA 144
A F + S F E + + ++ +K+ G+ T VQ A +P IL+ DV+ K+ G+GKT+A
Sbjct: 99 ASFLSDSRFDECSVSPLSLKGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVA 158
Query: 145 YLLPILSAIGPLRNKFPQGD-GDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDN 203
+LLP + + K P D G P I L+V P+RE+ Q E K+L
Sbjct: 159 FLLPSIEVV----VKSPPSDPGQSQTP-----ILVLVVCPTRELARQAAAEATKLLKYHP 209
Query: 204 KRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
Q ++GG +++ ++KN I+V TP R+ +
Sbjct: 210 TIGAQVVIGGTKIVSEQKRIQKNPCQILVATPGRLKD 246
>Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:46249372-46245255 | 20130731
Length = 641
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 422 AAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAH 481
A LHGD+ + R L F+ G LV T ++ARGLD+ L++ E P D Y H
Sbjct: 336 ARALHGDIQQAQREVTLSGFRYGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIH 395
Query: 482 RAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGI 516
R+GR GR G G V + DP + K++++ G+
Sbjct: 396 RSGRTGRAGNTG-VAVMLYDPRRSNIPKIERESGV 429
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 20/162 (12%)
Query: 93 FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSA 152
S+ + L E+LK +G +Q IL+ D++ ++ G GKTLA++LPIL +
Sbjct: 45 ISKFKISEPLREKLKEKGIESLFPIQAMTFDIILQGCDLVGRARTGQGKTLAFVLPILES 104
Query: 153 I-------GPLRNKFPQGD-------GDGGEPAKKLGIEALIVAPSREIGMQIVMELEKI 198
+ + K G+ G GG P + L++ P+RE+ Q+ + E +
Sbjct: 105 VTNGKAKETNAKTKETNGNARESRKGGYGGPPKPSV----LVLLPTRELACQVNADFE-V 159
Query: 199 LGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
G L GG QE L + IV+GTP RI +
Sbjct: 160 YGGAMGLTSCCLYGGAPYKAQEIKLERGVD-IVIGTPGRIKD 200
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
L +Y ++ + K L + AL V+ F+ + ++ L + +H
Sbjct: 262 GLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSG 321
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R K FK G R+LV T+L RG+D+ + ++V+N ++P + Y HR GR GR
Sbjct: 322 MSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 489 LGRNGTVLTICK-DPEVFVLKKLQKQLGIPI 518
G G +T +V VL +Q + + I
Sbjct: 382 FGTKGLAITFVSCSSDVDVLNNVQSRFEVDI 412
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
+ F + L L+ + + GF P+EVQ +P + DV+ ++ G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLST 104
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
L I P+ P + + ALI+ +RE+ QI E E+ V
Sbjct: 105 LQQIDPV-------------PGQ---VSALILCHTRELAYQICHEFERFSTYLADLKVAV 148
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG N ++ L+ P IVVGTP RI L+ + L
Sbjct: 149 FYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKDL 186
>Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561636 | 20130731
Length = 314
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
+ F + L L+ + + GF P+EVQ +P + DVI ++ G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
L I P+ + + AL++ +RE+ QI E E+ V
Sbjct: 105 LQQIDPVPGQ----------------VSALVLCHTRELAYQICHEFERFSTYLPDLKVAV 148
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG N ++ L+ P IVVGTP RI L+ + L
Sbjct: 149 FYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNL 186
>Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49558567 | 20130731
Length = 314
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
+ F + L L+ + + GF P+EVQ +P + DVI ++ G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
L I P+ + + AL++ +RE+ QI E E+ V
Sbjct: 105 LQQIDPVPGQ----------------VSALVLCHTRELAYQICHEFERFSTYLPDLKVAV 148
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG N ++ L+ P IVVGTP RI L+ + L
Sbjct: 149 FYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNL 186
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
+ F + L L+ + + GF P+EVQ +P + DVI ++ G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
L I P+ P + + AL++ +RE+ QI E E+ V
Sbjct: 105 LQQIDPV-------------PGQ---VSALVLCHTRELAYQICHEFERFSTYLPDLKVAV 148
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG N ++ L+ P IVVGTP RI L+ + L
Sbjct: 149 FYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNL 186
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
L +Y ++ + K L + AL V+ F+ + ++ L + +H
Sbjct: 262 GLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSG 321
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R + FK G R+LV T+L RG+D+ + ++V+N ++P + Y HR GR GR
Sbjct: 322 MSQEERLKRYRGFKEGHSRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 489 LGRNGTVLTICK-DPEVFVLKKLQKQLGIPI 518
G G +T +V VL +Q + I I
Sbjct: 382 FGTKGLAITFVSCSSDVDVLNNVQSRFEIDI 412
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
+ F + L L+ + + GF P+EVQ +P + DVI ++ G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
L I P+ P + + AL++ +RE+ QI E E+ V
Sbjct: 105 LQQIDPV-------------PGQ---VSALVLCHTRELAYQICHEFERFSTYLPDLKVAV 148
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG N ++ L+ P IVVGTP RI L+ + L
Sbjct: 149 FYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNL 186
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
L +Y ++ + K L + AL V+ F+ + ++ L + +H
Sbjct: 262 GLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSG 321
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R + FK G R+LV T+L RG+D+ + ++V+N ++P + Y HR GR GR
Sbjct: 322 MSQEERLKRYRGFKEGHSRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 489 LGRNGTVLTICK-DPEVFVLKKLQKQLGIPI 518
G G +T +V VL +Q + I I
Sbjct: 382 FGTKGLAITFVSCSSDVDVLNNVQSRFEIDI 412
>Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890320-18881902 | 20130731
Length = 492
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 419 GMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIH 478
G K LHG++ + R+T + FK +L++T++SARGLD ++ + P ++
Sbjct: 264 GCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATE 323
Query: 479 YAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQ 513
Y HR GR RLG G L + E+ L+ L+K
Sbjct: 324 YVHRVGRTARLGERGESLLFLQPSEIEYLQDLEKH 358
>Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P ++F E P+ ++ + GF PT +Q P L D+I + GSGKTL+YL
Sbjct: 197 PKPIRAFHEANFPDYCLDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYL 256
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP + + + + QG+G L++AP+RE+ +QI E K N R
Sbjct: 257 LPAIVHVS-AQPRLVQGEGP----------VVLVLAPTRELAVQIQQEAMKFGSRSNIRC 305
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAAR 245
+ GG + Q LR IV+ TP R+ ++ A+
Sbjct: 306 T-CIYGGAPKGPQIRDLRMGV-EIVIATPGRLIDMLEAQ 342
>Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P ++F E P+ ++ + GF PT +Q P L D+I + GSGKTL+YL
Sbjct: 197 PKPIRAFHEANFPDYCLDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYL 256
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP + + + + QG+G L++AP+RE+ +QI E K N R
Sbjct: 257 LPAIVHVS-AQPRLVQGEGP----------VVLVLAPTRELAVQIQQEAMKFGSRSNIRC 305
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAAR 245
+ GG + Q LR IV+ TP R+ ++ A+
Sbjct: 306 T-CIYGGAPKGPQIRDLRMGV-EIVIATPGRLIDMLEAQ 342
>Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P ++F E P+ ++ + GF PT +Q P L D+I + GSGKTL+YL
Sbjct: 197 PKPIRAFHEANFPDYCLDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYL 256
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP + + + + QG+G L++AP+RE+ +QI E K N R
Sbjct: 257 LPAIVHVS-AQPRLVQGEGP----------VVLVLAPTRELAVQIQQEAMKFGSRSNIRC 305
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAAR 245
+ GG + Q LR IV+ TP R+ ++ A+
Sbjct: 306 T-CIYGGAPKGPQIRDLRMGV-EIVIATPGRLIDMLEAQ 342
>Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P ++F E P+ ++ + GF PT +Q P L D+I + GSGKTL+YL
Sbjct: 197 PKPIRAFHEANFPDYCLDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYL 256
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP + + + + QG+G L++AP+RE+ +QI E K N R
Sbjct: 257 LPAIVHVS-AQPRLVQGEGP----------VVLVLAPTRELAVQIQQEAMKFGSRSNIRC 305
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAAR 245
+ GG + Q LR IV+ TP R+ ++ A+
Sbjct: 306 T-CIYGGAPKGPQIRDLRMGV-EIVIATPGRLIDMLEAQ 342
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
+ F + L L+ + + GF P+EVQ +P + DVI ++ G GKT ++L
Sbjct: 122 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 181
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
L I P+ P + + AL++ +RE+ QI E+E+ V
Sbjct: 182 LQQIDPV-------------PGQ---VAALVLCHTRELAYQICHEVERFSTYLPDIKVAV 225
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG N ++ L+ P IVVGTP RI L+ + L
Sbjct: 226 FYGGVNIKVHKDLLKNECPHIVVGTPGRILALTRDKDL 263
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 365 SLPPALKHYYCVVRLQH--KVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKA 422
+L ++HY ++LQ K L + AL V+ F+ + ++ L +
Sbjct: 336 TLHGLVQHY---IKLQEPEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPS 392
Query: 423 AELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHR 482
+H + + R K FK G R+LV T+L RG+D+ + ++V+N ++P + Y HR
Sbjct: 393 ICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHR 452
Query: 483 AGRIGRLGRNGTVLTICK---DPEVFVLKKLQKQLGIPI 518
GR GR G G +T D E VL ++Q + + I
Sbjct: 453 VGRAGRFGTKGLAITFVSSAGDSE--VLNQVQSRFEVDI 489
>Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40427970-40421694 | 20130731
Length = 747
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 4/161 (2%)
Query: 363 VESLPPALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDV--VCKLEARGM 420
V + P LK +V L K+D L I + F++ KQ+K V V K G+
Sbjct: 288 VTATPTLLKQTVMIVPLDQKLDMLWTFIKRHLQSKTLVFLSSCKQVKFVFEVFKKLHPGI 347
Query: 421 KAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKC-DLVVNLELPTDSIHY 479
LHG + + R I +F VL +T+++ARGLD K D VV ++ P + Y
Sbjct: 348 PLKCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASY 407
Query: 480 AHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGIPIPC 520
HR GR R G + E + +KL K +P+ C
Sbjct: 408 IHRVGRTARYNSVGKSVLFLLPSETMMHEKL-KAAKVPVHC 447
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 20/133 (15%)
Query: 111 FAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEP 170
F T++Q A++P L DV+ + GSGKTLA+++P+L + R ++ DG G
Sbjct: 95 FVSMTKIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLH--RERWGTEDGVG--- 149
Query: 171 AKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEALRK---NK 227
++I++P+RE+ QI L I G ++ L+GGG + A+ K NK
Sbjct: 150 -------SIIISPTRELAGQIFGVLNAI-GEHHRFSAGLLIGGGG----DVAIEKECVNK 197
Query: 228 PAIVVGTPSRIAE 240
I++ TP R+ +
Sbjct: 198 LNILICTPGRLLQ 210
>Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:40729630-40725252 | 20130731
Length = 756
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 93 FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSA 152
F E + + ++ L G+ T VQ ++P L+ +DV++K+ G+GKT A+LLP A
Sbjct: 289 FDECAISPLTIKALSTSGYTHMTRVQETSLPICLEGNDVMVKAKTGTGKTAAFLLP---A 345
Query: 153 IGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVG 212
I + P I LI+ P+RE+ QI E + +L + VQ LVG
Sbjct: 346 IETVLKAMSSKTSHRAPP-----IYVLILCPTRELASQIAAEAKVLLKYHDGVGVQTLVG 400
Query: 213 GGNRSRQEEALRKNKPAIVVGTPSRI---AELSAARKLRTLGCRFXXXXXXXXXXXXXXR 269
G ++ L + ++V TP R+ E +R +G + R
Sbjct: 401 GVRFKVDQKRLESDPCQMLVATPGRLLDHIENKTGISVRVMGLQMLILDEADHLLDLGFR 460
Query: 270 KDMHRMLEHVGRR 282
KD+ ++++ + R+
Sbjct: 461 KDIEKIVDCLPRQ 473
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 418 RGMK--AAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTD 475
R MK E+H +L R+ + +FK +LV++++++RG++ LV+ + +P+D
Sbjct: 566 RDMKLNVREIHSRKPQLYRTRVSDEFKESKQMILVSSDVTSRGMNYPDVTLVIQVGIPSD 625
Query: 476 SIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL---GIPIPCCD 522
Y HR GR GR G+ G + + E + L ++ K L P+P D
Sbjct: 626 REQYIHRLGRTGREGKEGKGILLIAPWEEYFLNEI-KDLPLEKFPLPDLD 674
>Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348848-14341230 | 20130731
Length = 508
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 380 QHKVDTLRRCIYALHAK--YVIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTI 437
++K+D+L + + AK V+ F N + V LE + HG++ R
Sbjct: 174 ENKLDSLLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVEN 233
Query: 438 LKKFK--NGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTV 495
L KFK N D LV T+L+ARGLD+ D V+ + P +SI Y HR GR R+G G +
Sbjct: 234 LNKFKSNNDDCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKI 292
Query: 496 LTICKDPEVFVLKKLQKQL 514
++ + + K+++ +
Sbjct: 293 TSLVTKKDYSLATKIEEAI 311
>Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40426461-40421694 | 20130731
Length = 536
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 4/161 (2%)
Query: 363 VESLPPALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDV--VCKLEARGM 420
V + P LK +V L K+D L I + F++ KQ+K V V K G+
Sbjct: 77 VTATPTLLKQTVMIVPLDQKLDMLWTFIKRHLQSKTLVFLSSCKQVKFVFEVFKKLHPGI 136
Query: 421 KAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKC-DLVVNLELPTDSIHY 479
LHG + + R I +F VL +T+++ARGLD K D VV ++ P + Y
Sbjct: 137 PLKCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASY 196
Query: 480 AHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGIPIPC 520
HR GR R G + E + +KL K +P+ C
Sbjct: 197 IHRVGRTARYNSVGKSVLFLLPSETMMHEKL-KAAKVPVHC 236
>Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:26237354-26229767 | 20130731
Length = 594
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
S+S +GL + L L N P+ VQ +++P++L DV+I + GSGKT +YLLP++
Sbjct: 91 SWSSIGLSHTLSRALSNIALNTPSLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLID 150
Query: 152 AIGPLRNKFPQ--GDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
+ D + PA+K+ L++ P+ ++ Q+V + G +++ +V
Sbjct: 151 KLRGTEEYSLDVVSDKEISPPARKV---LLVLCPNVQLCEQVVRMANSLCGDNDETIVSA 207
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPS 236
G +Q +R +P I+V TP+
Sbjct: 208 AAICG---KQGWPIR--EPDIIVTTPA 229
>Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857813-27867050 | 20130731
Length = 456
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 86 APFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAY 145
AP +SF+++ L +++ + + PT +Q A+P L D++ + GSGKT A+
Sbjct: 111 APAPIESFNDMCLHPSIMKDIAYHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAF 170
Query: 146 LLPILS---AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSD 202
+P++ A P+R +GDG AL++AP+RE+ QI E++ S
Sbjct: 171 TIPMIQHCLAQPPIR----RGDGP----------LALVLAPTRELAQQIEKEVQAFSRSL 216
Query: 203 NKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
+VGG N +Q LR I V TP R +
Sbjct: 217 ESFKTAIVVGGTNIEKQRSELRAGV-EIAVATPGRFID 253
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
I F+ + +V L A+G+ A LHG + R L F++ +LV T++++R
Sbjct: 372 TIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVASR 431
Query: 458 GLDVAKCDLVVNLELP 473
GLDV V+NL+LP
Sbjct: 432 GLDVTGVSHVINLDLP 447
>Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46109502-46117199 | 20130731
Length = 583
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 14/132 (10%)
Query: 110 GFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGE 169
GF T++Q A+P +L DV+ + GSGKTLA+L+P + + L KF Q G G
Sbjct: 115 GFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELLHKL--KFNQRSGTG-- 170
Query: 170 PAKKLGIEALIVAPSREIGMQIVMELEKILGSD-NKRVVQQLVGGGNRSRQEEALRKNKP 228
+I+ P+RE+ +Q +K+L + + + ++GG R + E+L K
Sbjct: 171 --------VVIICPTRELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKG-I 221
Query: 229 AIVVGTPSRIAE 240
IVV TP R+ +
Sbjct: 222 NIVVATPGRLLD 233
>Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC |
scaffold0427:505-2043 | 20130731
Length = 227
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 434 RSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELP--------------TDSIHY 479
R ++K+FK+G VL++ ++ ARG D + +LV+N +LP D Y
Sbjct: 104 RDKMVKEFKDGSTGVLISNDVLARGFDQDQVNLVINYDLPLNYTAEITCGGKPELDCEVY 163
Query: 480 AHRAGRIGRLGRNGTVLT-ICKDPEVFVLKKLQKQLG 515
HR GR GR GR G V IC + + ++ K++ G
Sbjct: 164 FHRVGRAGRFGRKGAVFNLICDERDEKLMSKIENHFG 200
>Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:23956977-23948909 | 20130731
Length = 557
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 78/154 (50%), Gaps = 15/154 (9%)
Query: 88 FAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLL 147
+ +SFS LGL + + F T++Q ++P +L DV+ + GSGKTLA+L+
Sbjct: 87 LSTESFSSLGLSERTSQAIAAMSFTHMTQIQAKSIPPLLMGKDVLGAARTGSGKTLAFLI 146
Query: 148 PILSAIGPLRN-KFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
P A+ L N +F +G G +++ P+RE+ +Q +++ + +
Sbjct: 147 P---AVELLYNVQFTPRNGTG----------VIVICPTRELAIQTHAVASELMKGYHSQT 193
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
+ +++GG R + E + K +++ TP R+ +
Sbjct: 194 LGKVIGGVGRKGEAERIVKG-VNLLIATPGRLLD 226
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
L+ Y VV + L + +K V+ F + +K L+ G+ +HG
Sbjct: 311 GLEQGYVVVPCAKRFVVLYSFLKRYQSKKVMVFFSSCNSVKFHADLLKFIGLDCLNIHGK 370
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ +R++ F + +L+ T+++ARGLD+ D +V + P + Y HR GR R
Sbjct: 371 QKQNSRTSTFFNFCKAEKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTAR 430
Query: 489 -LGRNGTVLTICKDPEVFVLKKLQKQLGIPIPCCDIAERKL 528
G G L E+ L+ L K +P+ ++KL
Sbjct: 431 GEGGKGNALLFLIPEELQFLRYL-KAAKVPVKEYAFDDKKL 470
>Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25903244-25908935 | 20130731
Length = 752
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Query: 363 VESLPPALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEAR--GM 420
V + P LK +V L K+D L I + F++ KQ+K V + G+
Sbjct: 288 VTATPTLLKQKVMIVPLDQKLDMLWNFIKTHLKSKTLVFLSSCKQVKFVFEAFKKLHPGI 347
Query: 421 KAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKC-DLVVNLELPTDSIHY 479
LHG + + R I +F +L T+++ARGLD + D VV ++ P + Y
Sbjct: 348 PLKCLHGRMKQEKRMAIYSEFCE-KCSILFATDVAARGLDFNRAVDWVVQVDCPENVASY 406
Query: 480 AHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQ 511
HR GR R G + E +L+KL+
Sbjct: 407 IHRVGRTARYKSLGKSVLYLLPSETKMLEKLE 438
>Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:32167186-32161537 | 20130731
Length = 589
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 418 RGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSI 477
+G LHG + + R L F + +L+ T+++ARGLD+ D +V + P D
Sbjct: 303 KGFSLISLHGKMKQSVREKALTSFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPN 362
Query: 478 HYAHRAGRIGRLGRNG 493
+ HR GR RLG+ G
Sbjct: 363 VFVHRVGRTARLGKQG 378
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 93 FSELGLP--NVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
FS+L P +++ L + F T VQ A +P + DV + + GSGKTLA+++P++
Sbjct: 15 FSDLKPPLSEPVLQALTDSNFDFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVIPLV 74
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQL 210
+ + + +P + LG+ I++P+RE+ QI + + + L
Sbjct: 75 EIL--------RRNASNPKPHQVLGV---IISPTRELASQIYHVAQPFISTLANVKSMLL 123
Query: 211 VGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
VGG + + + +++GTP R+ ++
Sbjct: 124 VGGVEVKADIKKIEEEGANVLIGTPGRLHDI 154
>Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC |
scaffold0915:3555-1057 | 20130731
Length = 282
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 20/138 (14%)
Query: 106 LKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDG 165
+ +GF P+ +Q ++P L D++ ++ G+GKT A+ +P L I D
Sbjct: 3 IYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKI----------DQ 52
Query: 166 DGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEALRK 225
D I+ +I+ P+RE+ +Q ++ K LG + +Q +V G S +++ +R
Sbjct: 53 DNN------IIQVVILVPTRELALQ-TSQVCKELGKHLQ--IQVMVTTGGTSLKDDIMRL 103
Query: 226 NKPA-IVVGTPSRIAELS 242
+P ++VGTP RI +L+
Sbjct: 104 YQPVHLLVGTPGRILDLA 121
>Medtr6g040070.1 | DEAD/DEAH-box helicase | HC |
chr6:14397151-14388452 | 20130731
Length = 784
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 93 FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSA 152
F ELG+ + L+E ++ G VP+E+QC +PTIL +++ S +TLAYLLP++
Sbjct: 579 FKELGMSDELIEVMEEIGEFVPSEIQCVVIPTILDGKSLLLSSPSQHDRTLAYLLPLIQM 638
Query: 153 I 153
+
Sbjct: 639 L 639
>Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:16475815-16482952 | 20130731
Length = 462
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 370 LKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDL 429
L+ + +V ++ TL + +K V+ F + T+ +K +K +HGD
Sbjct: 240 LEQEFILVPCAKRLITLYIMLKTTKSKKVMVFFSTTESVKFHEELFTFLDVKCYGVHGDQ 299
Query: 430 GELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRL 489
S I F N + +L+ T ++A GL++ DL+V + P D Y H+ GR R
Sbjct: 300 TVSEHSKIYYSFSNAEEMILLCTNIAAFGLNIPDVDLIVQYDPPIDPEEYIHKVGRTARG 359
Query: 490 GRNGTVL 496
R G L
Sbjct: 360 TRKGNAL 366
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 17/122 (13%)
Query: 115 TEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKL 174
T +Q A+P +L+ D+ S GSGKTLAYL+P L + +NK+ D
Sbjct: 41 TSIQAKAIPLLLRGDDLAAYSSNGSGKTLAYLIPALDHLC--KNKYEPDD---------- 88
Query: 175 GIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGT 234
GI +++ P+ + +QI +++ IL + + Q +G S + +RKN +++ T
Sbjct: 89 GIIVMVLCPNTMVAIQIDRDIKTILKDSPQTL--QTIGRLIASPGDRYVRKN---LLIAT 143
Query: 235 PS 236
P+
Sbjct: 144 PA 145
>Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25904178-25909316 | 20130731
Length = 535
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Query: 363 VESLPPALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEAR--GM 420
V + P LK +V L K+D L I + F++ KQ+K V + G+
Sbjct: 77 VTATPTLLKQKVMIVPLDQKLDMLWNFIKTHLKSKTLVFLSSCKQVKFVFEAFKKLHPGI 136
Query: 421 KAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKC-DLVVNLELPTDSIHY 479
LHG + + R I +F +L T+++ARGLD + D VV ++ P + Y
Sbjct: 137 PLKCLHGRMKQEKRMAIYSEFCEK-CSILFATDVAARGLDFNRAVDWVVQVDCPENVASY 195
Query: 480 AHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQ 511
HR GR R G + E +L+KL+
Sbjct: 196 IHRVGRTARYKSLGKSVLYLLPSETKMLEKLE 227
>Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:17543999-17545772 | 20130731
Length = 398
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 369 ALKHYYCVV-----RLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAA 423
+K +Y V +L+ D + A + I F++ ++ + K+++R K +
Sbjct: 231 GIKQFYVDVEKEEWKLETLCDIFELTVKAKSITHCIVFVDTRCKVDWLTDKMQSRDHKVS 290
Query: 424 ELHGDLGELARSTILKKF--KNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAH 481
+ D+ + R I+++F ++G VL+TT+ G DV K L+VN +LP +Y +
Sbjct: 291 VIQSDMDQNTRDIIVREFFSQSGSPHVLITTDPLVCGTDVHKVSLIVNYDLPAAPENYLY 350
Query: 482 RAG-RIGRLGRNGTVLTICKDPEVFVL 507
R G R G+ GR + + KD ++
Sbjct: 351 RIGRRSGQFGRCVAINFMTKDEATMII 377
>Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:33157541-33150855 | 20130731
Length = 497
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 433 ARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRN 492
RS L +F+ G +VL++++ RG+DV V+N ++P + HRAGR R G+
Sbjct: 374 VRSKTLNEFRKGVFQVLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGRTARAGQT 433
Query: 493 GTVLTICKDPEVFVLKKL 510
G T+ + EV KKL
Sbjct: 434 GRCFTLMSEDEVRRFKKL 451
>Medtr1g103260.1 | fanconi anemia, complementation group M protein |
HC | chr1:46727606-46713877 | 20130731
Length = 1198
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 398 VIAFMNHTKQLKDVVCKLEARG--MKAAELHGD--------LGELARSTILKKFKNGDVR 447
VI F N+ + ++D++ L G ++A E G + + +LKKF++G
Sbjct: 459 VIIFSNYRESVRDIMVALGGTGDQVRATEFIGQSSGKAMKGQSQKVQQAVLKKFRSGAYN 518
Query: 448 VLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEV 504
V+V T + GLD+ + DLV++ + + R GR GR +G + + K PEV
Sbjct: 519 VIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGR-KHDGRIPHVFK-PEV 573
>Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 | HC
| chr8:6234340-6233617 | 20130731
Length = 176
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 14/136 (10%)
Query: 367 PPALKHYYCVV-RLQHKVDTLRRC-IYALHAK------YVIAFMNHTKQLKDVVCKLEAR 418
P ++K +Y V + + K++TL C I+ L K + I F+N ++ + K+ +R
Sbjct: 13 PSSIKQFYVDVDKEEWKLETL--CDIFELTLKAYKSITHCIVFVNTIDKVDWLTDKMRSR 70
Query: 419 GMKAAELHGDLGELARSTILKKF--KNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDS 476
+HGD + TI ++F ++G +VL+TT+ G D+ K LVVN +LPT
Sbjct: 71 DHYV--IHGDRDQNTMDTIEREFLFESGSPQVLITTDPLVCGTDLHKASLVVNYDLPTVP 128
Query: 477 IHYAHRAGRIGRLGRN 492
+Y + GR G+ N
Sbjct: 129 ENYLNHIGRSGKFAIN 144
>Medtr2g031570.1 | DEAD-box helicase family protein | LC |
chr2:11922449-11924042 | 20130731
Length = 140
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF +LGL LVE + G+ P E+Q +P L+ DVI S SGKT A++LPIL
Sbjct: 72 SFKDLGLSEQLVEACEKIGWKNPKEIQTEVIPLALQGKDVIGISNTSSGKTGAFVLPILH 131
Query: 152 AI 153
A+
Sbjct: 132 AL 133
>Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:7041752-7035027 | 20130731
Length = 462
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 434 RSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNG 493
R L FK+G+ ++L+ +L++RGLD+ D V+N ++P D Y H +G+ G
Sbjct: 226 RLEALNAFKSGNCKILLCNDLASRGLDIPAVDTVINYDIPDDPRDYMH---HVGQAAPTG 282
Query: 494 TVLTICKDPEVFVLKKLQKQLGIPIPC 520
++ E + ++ +G +P
Sbjct: 283 VAISFVSPNEARWFEMIETHIGKKLPV 309