Miyakogusa Predicted Gene

Lj3g3v0937820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0937820.1 tr|I1KTT3|I1KTT3_SOYBN Isocitrate dehydrogenase
[NADP] OS=Glycine max GN=Gma.40048 PE=3 SV=1,91.83,0,NADP-SPECIFIC
ISOCITRATE DEHYDROGENASE,Isocitrate dehydrogenase NADP-dependent;
Iso_dh,Isopropylmala,CUFF.41672.1
         (416 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g062840.1 | NADP-dependent isocitrate dehydrogenase | HC |...   804   0.0  
Medtr5g077070.2 | NADP-dependent isocitrate dehydrogenase | HC |...   734   0.0  
Medtr5g077070.1 | NADP-dependent isocitrate dehydrogenase | HC |...   734   0.0  
Medtr6g005470.1 | NADP-dependent isocitrate dehydrogenase | HC |...   673   0.0  

>Medtr2g062840.1 | NADP-dependent isocitrate dehydrogenase | HC |
           chr2:26561074-26567297 | 20130731
          Length = 416

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/416 (90%), Positives = 400/416 (96%)

Query: 1   MEFRKIKVDNPIVEMDGDEMTRVIWKLIKDKLIFPFLELDIKYFDLGLPHRDATNDRVTI 60
           M F+KI+VDNPIVEMDGDEMTRVIW++IKDKLIFPFLELDIKYFDLGLPHRDATNDRVT+
Sbjct: 1   MGFQKIRVDNPIVEMDGDEMTRVIWRMIKDKLIFPFLELDIKYFDLGLPHRDATNDRVTV 60

Query: 61  ESAEATLKYNVAIKCATITPDEARVKEFNLKQMWKSPNGTIRNILNGTVFREPIICKNVP 120
           ES EATLKYNVAIKCATITPDE RVKEFNLKQMWKSPNGTIRNILNGTVFREPIICKN+P
Sbjct: 61  ESGEATLKYNVAIKCATITPDEGRVKEFNLKQMWKSPNGTIRNILNGTVFREPIICKNIP 120

Query: 121 RLVSGWTKPICIGRHAFGDQYRATDTIIRGPGKLKLVFEPSGHEEIKDLEVYNFDGAGGV 180
           RLVSGWTKPICIGRHAFGDQYRATD +I+GPGKLKLVF PSGHEE K+LEVYNF GAGGV
Sbjct: 121 RLVSGWTKPICIGRHAFGDQYRATDAVIKGPGKLKLVFAPSGHEEPKELEVYNFTGAGGV 180

Query: 181 ALSMYNTDESIQAFAEASMNIAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVFDTQWSQK 240
            L+MYNTDESI+AFAEASMNIA +KKWPLYLSTKNTILKKYDGRFKDIFQEV+D++WS K
Sbjct: 181 GLAMYNTDESIRAFAEASMNIALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYDSKWSHK 240

Query: 241 FKAAGIWYEHRLIDDMVAYSLKSDGGYVWACKNYDGDVQSDFIAQGFGSLGLMSSILVCP 300
           FKAAGIWYEHRLIDDMVAY+LKSDGGYVWACKNYDGDVQSDFIAQGFGSLGLM+S LVCP
Sbjct: 241 FKAAGIWYEHRLIDDMVAYALKSDGGYVWACKNYDGDVQSDFIAQGFGSLGLMTSTLVCP 300

Query: 301 DGKTIESEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDGNARLSDFTEK 360
           DGKTIE+EAAHGTVTRH+RVHQKGGETSTNSIASIFAWS+GLAHRAKLDGNARL DFTEK
Sbjct: 301 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWSQGLAHRAKLDGNARLLDFTEK 360

Query: 361 LETACIGTVELGKMTKDLALLVHGPKVYRSQYFNTEEFIDAVADQLRTRLSTQAKL 416
           LE ACIGTVELGKMTKDLALL+HGPKV RS Y NTEEFIDAVA++LRTRL+TQAKL
Sbjct: 361 LEAACIGTVELGKMTKDLALLIHGPKVSRSHYLNTEEFIDAVAEELRTRLTTQAKL 416


>Medtr5g077070.2 | NADP-dependent isocitrate dehydrogenase | HC |
           chr5:32875308-32880347 | 20130731
          Length = 412

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/411 (82%), Positives = 376/411 (91%)

Query: 1   MEFRKIKVDNPIVEMDGDEMTRVIWKLIKDKLIFPFLELDIKYFDLGLPHRDATNDRVTI 60
           M F+KIKV NPIVEMDGDEMTR+IWK IKDKLI PF+ELDIKYFDLGLP+RD T+D+VT+
Sbjct: 1   MGFQKIKVANPIVEMDGDEMTRIIWKYIKDKLILPFVELDIKYFDLGLPYRDETDDKVTV 60

Query: 61  ESAEATLKYNVAIKCATITPDEARVKEFNLKQMWKSPNGTIRNILNGTVFREPIICKNVP 120
           ESAEATLKYNVAIKCATITPDEARVKEF LK MW+SPNGTIRNILNGTVFREPIICKN+P
Sbjct: 61  ESAEATLKYNVAIKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPIICKNIP 120

Query: 121 RLVSGWTKPICIGRHAFGDQYRATDTIIRGPGKLKLVFEPSGHEEIKDLEVYNFDGAGGV 180
           RL+ GWTKPICIGRHAFGDQYRATD++I+GPGKLKLVF P G  E  DLEVYNF G GGV
Sbjct: 121 RLIPGWTKPICIGRHAFGDQYRATDSVIKGPGKLKLVFVPEGQGETTDLEVYNFTGEGGV 180

Query: 181 ALSMYNTDESIQAFAEASMNIAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVFDTQWSQK 240
           AL+MYNTDESI++FAEASM +A +KKWPLYLSTKNTILKKYDGRFKDIFQEV++  W  K
Sbjct: 181 ALAMYNTDESIRSFAEASMAVALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSK 240

Query: 241 FKAAGIWYEHRLIDDMVAYSLKSDGGYVWACKNYDGDVQSDFIAQGFGSLGLMSSILVCP 300
           ++AAGIWYEHRLIDDMVAY+LKS+GGYVWACKNYDGDVQSDF+AQGFGSLGLM+S+LVCP
Sbjct: 241 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300

Query: 301 DGKTIESEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDGNARLSDFTEK 360
           DGKTIE+EAAHGTVTRH+RVHQKGGETSTNSIASIFAW+RGLAHRAKLD NA L DFTEK
Sbjct: 301 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNATLLDFTEK 360

Query: 361 LETACIGTVELGKMTKDLALLVHGPKVYRSQYFNTEEFIDAVADQLRTRLS 411
           LE ACIG VE GKMTKDLAL++HG K+ R  Y NTEEFIDAVA  L+T++S
Sbjct: 361 LEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAADLKTKIS 411


>Medtr5g077070.1 | NADP-dependent isocitrate dehydrogenase | HC |
           chr5:32875291-32880357 | 20130731
          Length = 412

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/411 (82%), Positives = 376/411 (91%)

Query: 1   MEFRKIKVDNPIVEMDGDEMTRVIWKLIKDKLIFPFLELDIKYFDLGLPHRDATNDRVTI 60
           M F+KIKV NPIVEMDGDEMTR+IWK IKDKLI PF+ELDIKYFDLGLP+RD T+D+VT+
Sbjct: 1   MGFQKIKVANPIVEMDGDEMTRIIWKYIKDKLILPFVELDIKYFDLGLPYRDETDDKVTV 60

Query: 61  ESAEATLKYNVAIKCATITPDEARVKEFNLKQMWKSPNGTIRNILNGTVFREPIICKNVP 120
           ESAEATLKYNVAIKCATITPDEARVKEF LK MW+SPNGTIRNILNGTVFREPIICKN+P
Sbjct: 61  ESAEATLKYNVAIKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPIICKNIP 120

Query: 121 RLVSGWTKPICIGRHAFGDQYRATDTIIRGPGKLKLVFEPSGHEEIKDLEVYNFDGAGGV 180
           RL+ GWTKPICIGRHAFGDQYRATD++I+GPGKLKLVF P G  E  DLEVYNF G GGV
Sbjct: 121 RLIPGWTKPICIGRHAFGDQYRATDSVIKGPGKLKLVFVPEGQGETTDLEVYNFTGEGGV 180

Query: 181 ALSMYNTDESIQAFAEASMNIAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVFDTQWSQK 240
           AL+MYNTDESI++FAEASM +A +KKWPLYLSTKNTILKKYDGRFKDIFQEV++  W  K
Sbjct: 181 ALAMYNTDESIRSFAEASMAVALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSK 240

Query: 241 FKAAGIWYEHRLIDDMVAYSLKSDGGYVWACKNYDGDVQSDFIAQGFGSLGLMSSILVCP 300
           ++AAGIWYEHRLIDDMVAY+LKS+GGYVWACKNYDGDVQSDF+AQGFGSLGLM+S+LVCP
Sbjct: 241 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300

Query: 301 DGKTIESEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDGNARLSDFTEK 360
           DGKTIE+EAAHGTVTRH+RVHQKGGETSTNSIASIFAW+RGLAHRAKLD NA L DFTEK
Sbjct: 301 DGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNATLLDFTEK 360

Query: 361 LETACIGTVELGKMTKDLALLVHGPKVYRSQYFNTEEFIDAVADQLRTRLS 411
           LE ACIG VE GKMTKDLAL++HG K+ R  Y NTEEFIDAVA  L+T++S
Sbjct: 361 LEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAADLKTKIS 411


>Medtr6g005470.1 | NADP-dependent isocitrate dehydrogenase | HC |
           chr6:768370-775713 | 20130731
          Length = 482

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/411 (76%), Positives = 359/411 (87%), Gaps = 1/411 (0%)

Query: 6   IKVDNPIVEMDGDEMTRVIWKLIKDKLIFPFLELDIKYFDLGLPHRDATNDRVTIESAEA 65
           I V NPIVEMDGDEMTR+IWK+IKDKLIFP+L+L+IKYFDLG+ +RDAT DRVT+ESAEA
Sbjct: 73  IHVANPIVEMDGDEMTRIIWKMIKDKLIFPYLDLNIKYFDLGVLNRDATEDRVTVESAEA 132

Query: 66  TLKYNVAIKCATITPDEARVKEFNLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLVSG 125
           TLKYNVA+KCATITPDE RVKEF LK MW+SPNGTIRNILNGTVFREPIIC+N+PR++ G
Sbjct: 133 TLKYNVAVKCATITPDETRVKEFGLKSMWRSPNGTIRNILNGTVFREPIICRNIPRIIPG 192

Query: 126 WTKPICIGRHAFGDQYRATDTIIRGPGKLKLVFEPSGHEEIKDLEVYNFDGAGGVALSMY 185
           W KPICIGRHAFGDQYRATDT+I GPGKLKLVF P   +   +L+V++F G G VAL+MY
Sbjct: 193 WKKPICIGRHAFGDQYRATDTVINGPGKLKLVFVPEDGDTPVELDVHDFKGPG-VALAMY 251

Query: 186 NTDESIQAFAEASMNIAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVFDTQWSQKFKAAG 245
           N DESI+AFAE+SM++A+ KKWPLYLSTKNTILKKYDGRFKDIFQEV++ +W QKF+   
Sbjct: 252 NVDESIRAFAESSMSLAFTKKWPLYLSTKNTILKKYDGRFKDIFQEVYEERWRQKFEEHS 311

Query: 246 IWYEHRLIDDMVAYSLKSDGGYVWACKNYDGDVQSDFIAQGFGSLGLMSSILVCPDGKTI 305
           IWYEHRLIDDMVAY+LKS+GGYVWACKNYDGDVQSD +AQGFGSLGLM+S+L+  DGKT+
Sbjct: 312 IWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDLLAQGFGSLGLMTSVLLSSDGKTL 371

Query: 306 ESEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDGNARLSDFTEKLETAC 365
           E+EAAHGTVTRH+R HQKG ETSTNSIASIFAW+RGL HRAKLD N +L DF +KLE AC
Sbjct: 372 EAEAAHGTVTRHFRFHQKGQETSTNSIASIFAWTRGLEHRAKLDKNEKLLDFADKLEAAC 431

Query: 366 IGTVELGKMTKDLALLVHGPKVYRSQYFNTEEFIDAVADQLRTRLSTQAKL 416
           + TVE GKMTKDLALL+HGPKV R  Y NTEEFIDAVA  L  +L   A +
Sbjct: 432 VETVESGKMTKDLALLIHGPKVSREFYLNTEEFIDAVASNLERKLREPATV 482