Miyakogusa Predicted Gene
- Lj3g3v0936570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0936570.1 Non Characterized Hit- tr|A2Q3A8|A2Q3A8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,75.48,0,DUF946,Vacuolar protein sorting-associated protein
62; PRE-MRNA PROCESSING-RELATED,NULL; PRE-MRNA PR,CUFF.41656.1
(471 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g062430.1 | DUF946 family protein | HC | chr2:26354832-263... 741 0.0
Medtr2g062410.1 | DUF946 family protein | HC | chr2:26351741-263... 716 0.0
Medtr2g062370.1 | DUF946 family protein | HC | chr2:26335616-263... 689 0.0
Medtr2g062380.1 | DUF946 family protein | HC | chr2:26339356-263... 669 0.0
Medtr4g131710.1 | pre-mRNA processing protein PRP39, putative | ... 622 e-178
Medtr2g067640.1 | DUF946 family protein | HC | chr2:28316749-283... 590 e-168
Medtr2g062340.1 | DUF946 family protein | HC | chr2:26326374-263... 496 e-140
Medtr1g080410.1 | pre-mRNA processing protein PRP39, putative | ... 474 e-134
Medtr1g080370.1 | pre-mRNA processing protein PRP39, putative | ... 474 e-134
Medtr4g077620.1 | pre-mRNA processing protein PRP39, putative | ... 450 e-126
Medtr5g007860.1 | pre-mRNA processing protein PRP39, putative | ... 450 e-126
Medtr5g013780.1 | vacuolar protein sorting protein | HC | chr5:4... 50 6e-06
>Medtr2g062430.1 | DUF946 family protein | HC |
chr2:26354832-26357000 | 20130731
Length = 553
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/473 (75%), Positives = 408/473 (86%), Gaps = 13/473 (2%)
Query: 1 MLGSYGQPNNQPLFGWILVAKDVSS--TSSALKKPLDYTLVWNSASVKVSQDSPGYVWLP 58
MLG Y QPNN+PLFG++LVAKDVSS T+S LKKP+DYTLV N++++KV+QD+ Y+WLP
Sbjct: 92 MLGCYSQPNNKPLFGYVLVAKDVSSSTTNSTLKKPIDYTLVLNTSTIKVNQDTTCYIWLP 151
Query: 59 KAPDGYKALGHVVTTTPDKPSLDKIKCVRQDLTEQCEAYSWIWGTGGDSDPNSFNFYAVR 118
APDGYKALGHVVT T DKPSLDKI CVR DLT+QCE+ SWIWG+ N FNFY VR
Sbjct: 152 IAPDGYKALGHVVTATQDKPSLDKIMCVRSDLTDQCESSSWIWGS------NDFNFYDVR 205
Query: 119 PSNRGTQALGVGVGAFVAQNGGTNSSLSITCLKNTNAISKSMPNLKQIGALLQTYSPILY 178
P NRGTQA GV VGAFVAQNGGTN SI+CLKN N+ISK MPNL QI A+L+ YSP++Y
Sbjct: 206 PINRGTQAPGVHVGAFVAQNGGTNIPPSISCLKNLNSISKIMPNLVQIDAILKVYSPLMY 265
Query: 179 LHPDEEFQPSSVDWFFSNGALLYQRGKESNPVKIAPNGTNLPQDPHTDGAYWLDLPADAD 238
LHPDEE+ PSSV+WFFSNGALLY++G+ESNPV IA NG NLPQDP+ DG YWLDLP+D
Sbjct: 266 LHPDEEYLPSSVNWFFSNGALLYKKGEESNPVPIAQNGINLPQDPNNDGIYWLDLPSDDA 325
Query: 239 NKERVKKGDLQSFESYVHVKPMLGGTFTDLAMWVFYPFNGPARAKVEFFNVKLGRIGEHV 298
NKERVKKG+LQS ESYVHVKPMLGGTFTD+AMW+FYPFNGP RAKV+F NVKLG+IGEH+
Sbjct: 326 NKERVKKGNLQSAESYVHVKPMLGGTFTDIAMWIFYPFNGPGRAKVKFINVKLGKIGEHI 385
Query: 299 GDWEHVTLRISNFDGQLWKVYFAQHSKGAWVDSSQIEFQSDNNVNRPVVYSSLHGHASYP 358
GDWEHVTLR+SN DG+LW +YF+QHSKG W+DSSQ+EFQS NRPV YSSLHGHASYP
Sbjct: 386 GDWEHVTLRVSNLDGKLWHLYFSQHSKGEWIDSSQLEFQS----NRPVFYSSLHGHASYP 441
Query: 359 HPGLILQGKNGIGIRNDTAKSASVLDMRKCVLISTEYLGSSAVVEPPWLNYFREWGPKID 418
H GL+LQGKNGIGIRND+AKS +LD+ K VLIS +YLG S V+EPPWL+YFR+WGPKID
Sbjct: 442 HEGLVLQGKNGIGIRNDSAKSEMILDLTKFVLISADYLG-SFVIEPPWLHYFRKWGPKID 500
Query: 419 YNIDDELKKVEKFLPGKLKTAFENIIKSLPNEVLGEEGPTGPKAKNNWSGDEV 471
YNID+EL+KVEK LPGKLK FENII+SLP EVLGEEGPTGPK KNNWSGDEV
Sbjct: 501 YNIDEELRKVEKILPGKLKDIFENIIRSLPEEVLGEEGPTGPKLKNNWSGDEV 553
>Medtr2g062410.1 | DUF946 family protein | HC |
chr2:26351741-26347341 | 20130731
Length = 586
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/474 (73%), Positives = 395/474 (83%), Gaps = 10/474 (2%)
Query: 1 MLGSYGQPNNQPLFGWILVAKDVSSTSSA--LKKPLDYTLVWNSASVKVSQDSPGYVWLP 58
MLGSY QPNN+PLFG++ VAKDVSS+++ LK P+DYTLV N+AS K +QDS Y+WLP
Sbjct: 120 MLGSYSQPNNKPLFGYVFVAKDVSSSTTGRTLKPPVDYTLVSNTASFKATQDSTLYIWLP 179
Query: 59 KAPDGYKALGHVVTTTPDKPSLDKIKCVRQDLTEQCEAYSWIWGTGGDSDPNSFNFYAVR 118
AP+GYKALGHVVTTT DKPSLDKI CVR DLT+QCE+ SWIWG+ N+FNFY VR
Sbjct: 180 IAPNGYKALGHVVTTTQDKPSLDKIMCVRSDLTDQCESSSWIWGS------NNFNFYNVR 233
Query: 119 PSNRGTQALGVGVGAFVAQNGGTNSSLSITCLKNTNAISKSMPNLKQIGALLQTYSPILY 178
P NRGTQA GV VG F AQNGG + SI+CLKN N+IS+ MPN KQI A+LQ YSP LY
Sbjct: 234 PINRGTQAPGVRVGTFFAQNGGNTNPPSISCLKNLNSISQIMPNKKQIEAMLQVYSPFLY 293
Query: 179 LHPDEEFQPSSVDWFFSNGALLYQRGKESNPVKIAPNGTNLPQDPHTDGAYWLDLPADAD 238
LH DEE+ PSSV+WFFSNGALLY++G+ESNPV IA NGTNLPQDP+TDGAYW+DLPADA
Sbjct: 294 LHSDEEYLPSSVNWFFSNGALLYKKGEESNPVPIAQNGTNLPQDPNTDGAYWIDLPADAA 353
Query: 239 NKERVKKGDLQSFESYVHVKPMLGGTFTDLAMWVFYPFNGPARAKVEFFNVKLGRIGEHV 298
NKERVKKG+LQS ESYVHVKPM GGTFTD+AMWVFYPFNGP RAKVEF NVKLG+IGEHV
Sbjct: 354 NKERVKKGNLQSAESYVHVKPMYGGTFTDIAMWVFYPFNGPGRAKVEFLNVKLGKIGEHV 413
Query: 299 GDWEHVTLRISNFDGQLWKVYFAQHSKGAWVDSSQIEFQSD-NNVNRPVVYSSLHGHASY 357
GDWEHVTLR+SN DGQLW VYF+QH+ G+W+DSSQ+EFQ RPVVY+SLHGHASY
Sbjct: 414 GDWEHVTLRVSNLDGQLWHVYFSQHNLGSWIDSSQLEFQDGIGATKRPVVYASLHGHASY 473
Query: 358 PHPGLILQGKNGIGIRNDTAKSASVLDMRKCVLISTEYLGSSAVVEPPWLNYFREWGPKI 417
PH GL+L GKNGIG R+DT K +V+DM K VL+S EYLGS V EP WLNYFREWGP +
Sbjct: 474 PHAGLVLLGKNGIGARDDTNKGKNVMDMGKFVLVSAEYLGSE-VKEPAWLNYFREWGPHV 532
Query: 418 DYNIDDELKKVEKFLPGKLKTAFENIIKSLPNEVLGEEGPTGPKAKNNWSGDEV 471
DY++DDELK VEK LPGKLK FE+II+SLP E LGE GPTGPK KNNWSGDEV
Sbjct: 533 DYSLDDELKNVEKLLPGKLKNGFEDIIRSLPKEALGEAGPTGPKQKNNWSGDEV 586
>Medtr2g062370.1 | DUF946 family protein | HC |
chr2:26335616-26332295 | 20130731
Length = 590
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/478 (69%), Positives = 387/478 (80%), Gaps = 14/478 (2%)
Query: 1 MLGSYGQPNNQPLFGWILVAKDVS--STSSALKKPLDYTLVWNSASVKVSQDSPGYVWLP 58
MLGSY QPNN+PLFG++L AKD+S +T+ LK P+DYTLV N+ASV V QDSP Y+WLP
Sbjct: 120 MLGSYSQPNNKPLFGYVLAAKDISGSTTNGTLKPPVDYTLVSNTASVMVDQDSPLYIWLP 179
Query: 59 KAPDGYKALGHVVTTTPDKPSLDKIKCVRQDLTEQCEAYSWIWGTGGDSDPNSFNFYAVR 118
APDGY A+GHVVTTT DKPS DK+ CVR DLTEQCE+ +WIWG+ N NFY VR
Sbjct: 180 IAPDGYHAVGHVVTTTQDKPSPDKVMCVRADLTEQCESSTWIWGS------NDLNFYDVR 233
Query: 119 PSNRGTQALGVGVGAFVAQNGGTNSSLSITCLKNTNAISKSMPNLKQIGALLQTYSPILY 178
P NRG++A GV VG FVAQNGG + SI+CLKN N+IS+ MPN QI LL +YSP LY
Sbjct: 234 PINRGSKAPGVRVGTFVAQNGGNTNPPSISCLKNLNSISQIMPNQTQIETLLHSYSPFLY 293
Query: 179 LHPDEEFQPSSVDWFFSNGALLYQRGKESNPVKIAPNGTNLPQDPHTDGAYWLDLPADAD 238
LHPDEE+ PSSV+WFFSNGALLY++G+ESNPV I NGTNLPQDP+ DGAYWLDLP D
Sbjct: 294 LHPDEEYLPSSVNWFFSNGALLYKKGEESNPVPIEQNGTNLPQDPNNDGAYWLDLPVDDA 353
Query: 239 NKERVKKGDLQSFESYVHVKPMLGGTFTDLAMWVFYPFNGPARAKVEFFNVKLGRIGEHV 298
NKERVK+G+LQS ESYVHVKPM GGTFTD+AMWVFYPFNGPA+AK++F NVKLG++GEHV
Sbjct: 354 NKERVKQGNLQSAESYVHVKPMYGGTFTDIAMWVFYPFNGPAKAKIKFINVKLGKVGEHV 413
Query: 299 GDWEHVTLRISNFDGQLWKVYFAQHSKGAWVDSSQIEFQSDNN-----VNRPVVYSSLHG 353
GDWEHVTLR+SN DGQLW VYF+QH+ G+WVD+SQ+EFQ DN+ RPVVY+S HG
Sbjct: 414 GDWEHVTLRVSNLDGQLWHVYFSQHNGGSWVDASQLEFQMDNSSFDFPTQRPVVYASRHG 473
Query: 354 HASYPHPGLILQGKNGIGIRNDTAKSASVLDMRKCVLISTEYLGSSAVVEPPWLNYFREW 413
HASYPH GL L GKNG+G R+DT K ++V+DM K VL+S EYL S V EP WLN+FREW
Sbjct: 474 HASYPHGGLHLLGKNGVGARDDTDKGSNVMDMGKYVLVSAEYL-ESEVKEPAWLNFFREW 532
Query: 414 GPKIDYNIDDELKKVEKFLPGKLKTAFENIIKSLPNEVLGEEGPTGPKAKNNWSGDEV 471
GP +DY++DDELK VEK LPGKLK FE II LP E+LGEEGPTGPK K NW+GDEV
Sbjct: 533 GPHVDYSLDDELKNVEKLLPGKLKDVFEKIIMGLPKELLGEEGPTGPKEKGNWNGDEV 590
>Medtr2g062380.1 | DUF946 family protein | HC |
chr2:26339356-26337616 | 20130731
Length = 560
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/477 (67%), Positives = 382/477 (80%), Gaps = 13/477 (2%)
Query: 1 MLGSYGQPNNQPLFGWILVAKDVS-STSSALKKPLDYTLVWNSASVKVSQDSPGYVWLPK 59
MLGSY QPN++PLFG++LVAKD+S T+ LK P+DY+LV N+AS+ V+QDS Y+WLP
Sbjct: 91 MLGSYSQPNSKPLFGYVLVAKDISGKTNGTLKPPVDYSLVLNTASITVTQDSSLYIWLPI 150
Query: 60 APDGYKALGHVVTTTPDKPSLDKIKCVRQDLTEQCEAYSWIWGTGGDSDPNSFNFYAVRP 119
AP+GY A+GHVVT T DKPS +K+ CVR DLTEQCE+ + IWG+ N NFY VRP
Sbjct: 151 APNGYHAVGHVVTKTQDKPSTNKVMCVRSDLTEQCESSTLIWGS------NGLNFYDVRP 204
Query: 120 SNRGTQALGVGVGAFVAQNGGTNSSLSITCLKNTNAISKSMPNLKQIGALLQTYSPILYL 179
NRG +ALGV VG FVAQNGG + SI+CLKN ++I++ MP+ KQI ALLQ +P LYL
Sbjct: 205 INRGIKALGVRVGTFVAQNGGNINPPSISCLKNIDSITQIMPSKKQIDALLQVNAPFLYL 264
Query: 180 HPDEEFQPSSVDWFFSNGALLYQRGKESNPVKIAPNGTNLPQDPHTDGAYWLDLPADADN 239
H DEE+ PSSV+WFFSNGALLY++G+ESNPV IA NG NLPQDP+TDG+ WLDLP D N
Sbjct: 265 HSDEEYLPSSVNWFFSNGALLYKKGRESNPVPIAQNGNNLPQDPNTDGSCWLDLPVDNAN 324
Query: 240 KERVKKGDLQSFESYVHVKPMLGGTFTDLAMWVFYPFNGPARAKVEFFNVKLGRIGEHVG 299
KERVKKG+LQS ESYVHVKPM GGTFTD+AMWVFYPFNG RAKVEF ++KLG+ GEHVG
Sbjct: 325 KERVKKGNLQSAESYVHVKPMYGGTFTDIAMWVFYPFNGAGRAKVEFIDIKLGKAGEHVG 384
Query: 300 DWEHVTLRISNFDGQLWKVYFAQHSKGAWVDSSQIEFQSDNN-----VNRPVVYSSLHGH 354
DWEHVTLR+SNFDGQLW VYF+QH+ G W+DSSQ+EFQSD + RP+VY+SLHGH
Sbjct: 385 DWEHVTLRVSNFDGQLWHVYFSQHNAGKWIDSSQLEFQSDASSFDFPTKRPIVYASLHGH 444
Query: 355 ASYPHPGLILQGKNGIGIRNDTAKSASVLDMRKCVLISTEYLGSSAVVEPPWLNYFREWG 414
ASYPH GL L GKNG+G R+DT K +V+DM K VL+ EYLGS V EP WLNYFREWG
Sbjct: 445 ASYPHAGLNLLGKNGVGARDDTNKGRNVMDMGKYVLVCAEYLGSE-VKEPAWLNYFREWG 503
Query: 415 PKIDYNIDDELKKVEKFLPGKLKTAFENIIKSLPNEVLGEEGPTGPKAKNNWSGDEV 471
P ID+++D ELK V K LPGKL+ FENII+SLP E LGEEGPTGPK K NW+GDE+
Sbjct: 504 PHIDFDLDIELKNVAKALPGKLRDGFENIIRSLPKEALGEEGPTGPKEKGNWNGDEI 560
>Medtr4g131710.1 | pre-mRNA processing protein PRP39, putative | HC
| chr4:54946647-54949963 | 20130731
Length = 586
Score = 622 bits (1605), Expect = e-178, Method: Compositional matrix adjust.
Identities = 310/480 (64%), Positives = 370/480 (77%), Gaps = 16/480 (3%)
Query: 1 MLGSYGQPNNQPLFGWILVAKDVSS--TSSALKKPLDYTLVWNSASVKVSQDSPGYVWLP 58
MLGSY QPNN+PLFG++LVAKDVSS T S LK P+DYT V + S +Q P Y+WLP
Sbjct: 114 MLGSYSQPNNKPLFGYVLVAKDVSSSTTKSTLKPPIDYTFVLKAKSYSATQVLPLYIWLP 173
Query: 59 KAPDGYKALGHVVTTTPDKPSLDKIKCVRQDLTEQCEAYSWIWGTGGDSDPNSFNFYAVR 118
AP+GY+ALGHVVT T DKP LDKI CVR DLTE+CE S IW + FNFY VR
Sbjct: 174 VAPNGYRALGHVVTKTRDKPPLDKIMCVRSDLTEKCETSSLIW------ESEDFNFYDVR 227
Query: 119 PSNRGTQALGVGVGAFVAQNGGTNSSLSITCLKNTNAISKSMPNLKQIGALLQTYSPILY 178
P +RGTQA G+ VG FVAQNG + SI+CLKN N+ISK MPNL+QI A+L+ YSP +Y
Sbjct: 228 PISRGTQARGIHVGTFVAQNGRLTNPPSISCLKNLNSISKIMPNLQQIKAILKVYSPFVY 287
Query: 179 LHPDEEFQPSSVDWFFSNGALLYQRGKESNPVKIAPNGTNLPQ--DPHTDGAYWLDLPAD 236
LHPDE++ PSSV+WFFSNGALLY++G ESNP IA NGTNLPQ +P D AYW+DLPAD
Sbjct: 288 LHPDEKYLPSSVNWFFSNGALLYKKGHESNPRPIAQNGTNLPQGPNPKHDRAYWIDLPAD 347
Query: 237 ADNKERVKKGDLQSFESYVHVKPMLGGTFTDLAMWVFYPFNGPARAKVEFFNVKLGRIGE 296
NK+RVK+G+LQS ESYVHVKPM GGTFTD AMW FYPFNGP R K+ F N+KL RIGE
Sbjct: 348 HANKDRVKQGNLQSAESYVHVKPMFGGTFTDFAMWTFYPFNGPGRLKIGFINIKLERIGE 407
Query: 297 HVGDWEHVTLRISNFDGQLWKVYFAQHSKGAWVDSSQIEFQSDNN-----VNRPVVYSSL 351
HVGDWEHVTLR+SN DG+LWKVYF+ H G+WVDSSQ+EFQ+D + RPVV++SL
Sbjct: 408 HVGDWEHVTLRVSNLDGKLWKVYFSHHKTGSWVDSSQLEFQNDTSNIDFPTKRPVVHASL 467
Query: 352 HGHASYPHPGLILQGKNGIGIRNDTAKSASVLDMRKCVLISTEYLGSSAVVEPPWLNYFR 411
HGH++YPH GL+L GK GIG R+DT KS+ V+DM K VL+S EYLGS V EP WLN++R
Sbjct: 468 HGHSTYPHAGLVLLGKKGIGARDDTDKSSKVMDMGKYVLVSAEYLGSK-VKEPAWLNFYR 526
Query: 412 EWGPKIDYNIDDELKKVEKFLPGKLKTAFENIIKSLPNEVLGEEGPTGPKAKNNWSGDEV 471
WGP +DY ++DEL K++K GKLK FE +I+ LP E+L EEGPTGPK K NW+GDE+
Sbjct: 527 TWGPHVDYKLEDELNKLKKLFLGKLKHVFEKVIRGLPKEMLQEEGPTGPKEKKNWNGDEL 586
>Medtr2g067640.1 | DUF946 family protein | HC |
chr2:28316749-28314202 | 20130731
Length = 541
Score = 590 bits (1521), Expect = e-168, Method: Compositional matrix adjust.
Identities = 292/474 (61%), Positives = 361/474 (76%), Gaps = 20/474 (4%)
Query: 2 LGSYGQPNNQPLFGWILVAKDVSSTSSALKKPLDYTLVWNSASVKVSQDSPGYVWLPKAP 61
LG Y QPNN+PLFGW+LVAKD S+ ALKKP+DYTLVW+S S K+ QD GY+WLP AP
Sbjct: 84 LGHYSQPNNKPLFGWVLVAKDESN--GALKKPIDYTLVWSSKSEKIKQDKDGYIWLPIAP 141
Query: 62 DGYKALGHVVTTTPDKPSLDKIKCVRQDLTEQCEAYSWIWGTGGDSDPNSFNFYAVRPSN 121
+GY LGH+VTTTP+KPSLD+I+CVR DLT+QCE SWIWG D FN + VRP N
Sbjct: 142 NGYSPLGHIVTTTPEKPSLDRIQCVRSDLTDQCEINSWIWGKDKKIDEKGFNVHYVRPIN 201
Query: 122 RGTQALGVGVGAFVAQNGG-TNSSLSITCLKNTNAIS-KSMPNLKQIGALLQTYSPILYL 179
RG +A V VG F+A G TN+ L I+CLKN N ++ SMPNL QI AL Q YSP +YL
Sbjct: 202 RGIEAPSVLVGTFLAHVGEITNTPLPISCLKNINFMNFSSMPNLPQIKALAQAYSPFMYL 261
Query: 180 HPDEEFQPSSVDWFFSNGALLYQRGKESNPVKIAPNGTNLPQDPHTDGAYWLDLPADADN 239
HP+E+FQP S+ W+F+NGALLY++G+ESNP++I P G+NLPQ DGAYWLDLP D DN
Sbjct: 262 HPNEKFQPCSIKWYFTNGALLYKKGEESNPMEIDPLGSNLPQGGSNDGAYWLDLPKDKDN 321
Query: 240 KERVKKGDLQSFESYVHVKPMLGGTFTDLAMWVFYPFNGPARAKVEFF-NVKLGRIGEHV 298
+ERVKKGD ++ + Y HVKP+ GGTFTDLAMW+FYPFNGP KV N+ LG+IGEH+
Sbjct: 322 RERVKKGDFKNCQGYFHVKPIFGGTFTDLAMWIFYPFNGPGTLKVGLIDNISLGKIGEHI 381
Query: 299 GDWEHVTLRISNFDGQLWKVYFAQHSKGAWVDSSQIEFQSDNNVNRPVVYSSLHGHASYP 358
GDWEHVTLR+SNF+G+L +VYF+QHS G WVDSS++EFQS N+PV YSSL+GHA YP
Sbjct: 382 GDWEHVTLRVSNFNGELKRVYFSQHSNGQWVDSSEVEFQSG---NKPVAYSSLNGHAIYP 438
Query: 359 HPGLILQGKNGIGIRNDTAKSASVLDMR-KCVLISTEYLGSSAVVEPPWLNYFREWGPKI 417
GL+LQG + IGI+N+T KS V+D ++S EYLG+ +VEP W+N+FR+WGPKI
Sbjct: 439 KAGLVLQGTSDIGIKNETKKSDLVIDFGVNFEIVSGEYLGNQ-IVEPGWVNFFRQWGPKI 497
Query: 418 DYNIDDELKKVEKFLPGKLKTAFENIIKSLPNEVLGEEGPTGPKAKNNWSGDEV 471
YN+ DEL+K+EK +PG LK LPNE++GEEGPTGPK K NW GDE+
Sbjct: 498 TYNLGDELEKLEKVVPG-LK---------LPNELIGEEGPTGPKQKRNWVGDEI 541
>Medtr2g062340.1 | DUF946 family protein | HC |
chr2:26326374-26324326 | 20130731
Length = 517
Score = 496 bits (1277), Expect = e-140, Method: Compositional matrix adjust.
Identities = 267/479 (55%), Positives = 317/479 (66%), Gaps = 55/479 (11%)
Query: 1 MLGSYGQPNNQPLFGWILVAKDVSSTSS-ALKKPLDYTLVWNSASVKVSQDSPGYVWLPK 59
+LG Y QPNN+PL GW+LV KD SST++ ALKKPL+Y LV N S++ QD GY+WLP
Sbjct: 84 VLGYYCQPNNKPLHGWVLVGKDNSSTTNRALKKPLNYKLVCNIKSLQNRQDIRGYIWLPI 143
Query: 60 APDGYKALGHVVTTTPDKPSLDKIKCVRQDLTEQCEAYSWI--WGTGGDSDPNSFNFYAV 117
APDGYK +GHVVTT+ +KPSLDKI CVR DLT++C Y I W T + FN Y V
Sbjct: 144 APDGYKVVGHVVTTSQEKPSLDKIMCVRSDLTDECVKYKSIKLWRT----ENKRFNVYDV 199
Query: 118 RPSNRGTQALGVGVGAFVAQNGGTNS-SLSITCLKNTNAIS-KSMPNLKQIGALLQTYSP 175
RP RG +A GV VG F+AQ G NS +L I CLKNTNAI SMPNL QI L++ YSP
Sbjct: 200 RPMKRGVEAKGVYVGTFLAQCGRKNSKTLPIVCLKNTNAIKFSSMPNLHQIETLIKAYSP 259
Query: 176 ILYLHPDEEFQPSSVDWFFSNGALLYQ-RGKESNPVKIAPNGTNLPQDPHTDG--AYWLD 232
+YLHP +++ PSSV+WFF NG +L + R N I P G+NLPQ + G +YWLD
Sbjct: 260 YMYLHPMDKYLPSSVEWFFINGTILCEKRDGVINVSPIEPTGSNLPQGCSSIGMSSYWLD 319
Query: 233 LPADADNKERVKKGDLQSFESYVHVKPMLGGTFTDLAMWVFYPFNGPARAKVEFFNVKLG 292
LP D KERVKKGDLQS ++YVHVKPMLGGTFTDL MWVFYPFNG ARAKV F N+ L
Sbjct: 320 LPMDEAAKERVKKGDLQSSKAYVHVKPMLGGTFTDLVMWVFYPFNGGARAKVAFMNIPLR 379
Query: 293 RIGEHVGDWEHVTLRISNFDGQLWKVYFAQHSKGAWVDSSQIEFQSDNNVNRPVVYSSLH 352
GEHVGDWEHVTLR+SNF G+LW VY +QHSKG WVD+ +EF+ N NRPV+YSSLH
Sbjct: 380 TKGEHVGDWEHVTLRVSNFSGELWMVYLSQHSKGQWVDACDLEFK---NGNRPVLYSSLH 436
Query: 353 GHASYPHPGLILQGKNGIGIRNDTAKSASVLDMRKCV-LISTEYLGSSAVVEPPWLNYFR 411
GHA +P PG ++QG G GIRND KS V+DM K +++ EYLGS + EPPWLNY
Sbjct: 437 GHALFPRPGCVMQGVRGFGIRNDACKSDLVMDMVKGYEIVAAEYLGSE-IREPPWLNYEM 495
Query: 412 EWGPKIDYNIDDELKKVEKFLPGKLKTAFENIIKSLPNEVLGEEGPTGPKAKNNWSGDE 470
WGP+ EGP GPK K+ W GDE
Sbjct: 496 NWGPR--------------------------------------EGPKGPKQKDFWKGDE 516
>Medtr1g080410.1 | pre-mRNA processing protein PRP39, putative | HC
| chr1:35722476-35725575 | 20130731
Length = 560
Score = 474 bits (1219), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/482 (49%), Positives = 312/482 (64%), Gaps = 23/482 (4%)
Query: 2 LGSYGQPNNQPLFGWILVAKDVSSTSSA---------LKKPLDYTLVWNSASVKVSQDSP 52
LG Y N+QPL G +LVA++ +S S A LKKPL+Y+L+W S D
Sbjct: 87 LGYYCHSNDQPLRGHVLVARETTSKSQADCSESESPALKKPLNYSLIW----CMDSHDEC 142
Query: 53 GYVWLPKAPDGYKALGHVVTTTPDKPSLDKIKCVRQDLTEQCEAYSWIWGTGGDSDPNSF 112
Y WLP P GYKA+G VVTT PD+P ++++CVR DLTE CE + S NSF
Sbjct: 143 VYFWLPNPPKGYKAVGIVVTTNPDEPKAEEVRCVRTDLTEVCETSDLLLTI--KSKKNSF 200
Query: 113 NFYAVRPSNRGTQALGVGVGAFVAQN-GGTNSSLSITCLKNTNAISKSMPNLKQIGALLQ 171
+ +P +RG A GV VG F + + + CLKN +++ +MPNL QI AL++
Sbjct: 201 QVWNTQPCDRGMLARGVSVGTFFCGTYFDSEQVVDVVCLKNLDSLLHAMPNLNQIHALIE 260
Query: 172 TYSPILYLHPDEEFQPSSVDWFFSNGALLYQRGKESNPVKIAPNGTNLPQDPHTDGAYWL 231
Y P +Y HPDE++ PSSV WFF NGA+LY G I +GTNLP + DGA+W+
Sbjct: 261 HYGPTVYFHPDEKYMPSSVSWFFKNGAILYTAGNAKGKA-IDYHGTNLPGGGYNDGAFWI 319
Query: 232 DLPADADNKERVKKGDLQSFESYVHVKPMLGGTFTDLAMWVFYPFNGPARAKVEFFNVKL 291
DLP D D + +KKG+++S E YVHVKP LGG FTD+AMWVF PFNGPA KV N+++
Sbjct: 320 DLPTDEDARSNLKKGNIESAELYVHVKPALGGAFTDIAMWVFCPFNGPATLKVSLMNIEM 379
Query: 292 GRIGEHVGDWEHVTLRISNFDGQLWKVYFAQHSKGAWVDSSQIEFQSDNNVNRPVVYSSL 351
+IGEHVGDWEH TLR+SNF G+LW V+F++HS G WV++ +EF + N+P+VYSS
Sbjct: 380 NKIGEHVGDWEHFTLRVSNFTGELWSVFFSEHSGGKWVNAFDLEFIKE---NKPIVYSSR 436
Query: 352 HGHASYPHPGLILQG--KNGIGIRNDTAKSASVLDMR-KCVLISTEYLGSSAVVEPPWLN 408
HGHASYPH G LQG K GIG+RND AKS +LD + +++ EYLG + EP WL
Sbjct: 437 HGHASYPHAGTYLQGSSKLGIGVRNDAAKSNFILDSSFRYKIVAAEYLGDGVITEPCWLQ 496
Query: 409 YFREWGPKIDYNIDDELKKVEKFLPGKLKTAFENIIKSLPNEVLGEEGPTGPKAKNNWSG 468
Y REWGP I Y+ E++K+ LP ++ + EN+ + P E+ GEEGPTGPK K+NW G
Sbjct: 497 YMREWGPTIVYDSRSEIEKIIDMLPIFVRFSVENLFELFPTELSGEEGPTGPKEKDNWLG 556
Query: 469 DE 470
DE
Sbjct: 557 DE 558
>Medtr1g080370.1 | pre-mRNA processing protein PRP39, putative | HC
| chr1:35701817-35705121 | 20130731
Length = 560
Score = 474 bits (1219), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/482 (49%), Positives = 312/482 (64%), Gaps = 23/482 (4%)
Query: 2 LGSYGQPNNQPLFGWILVAKDVSSTSSA---------LKKPLDYTLVWNSASVKVSQDSP 52
LG Y N+QPL G +LVA++ +S S A LKKPL+Y+L+W S D
Sbjct: 87 LGYYCHSNDQPLRGHVLVARETTSKSQADCSESESPALKKPLNYSLIW----CMDSHDEC 142
Query: 53 GYVWLPKAPDGYKALGHVVTTTPDKPSLDKIKCVRQDLTEQCEAYSWIWGTGGDSDPNSF 112
Y WLP P GYKA+G VVTT PD+P ++++CVR DLTE CE + S NSF
Sbjct: 143 VYFWLPNPPKGYKAVGIVVTTNPDEPKAEEVRCVRTDLTEVCETSDLLLTI--KSKKNSF 200
Query: 113 NFYAVRPSNRGTQALGVGVGAFVAQN-GGTNSSLSITCLKNTNAISKSMPNLKQIGALLQ 171
+ +P +RG A GV VG F + + + CLKN +++ +MPNL QI AL++
Sbjct: 201 QVWNTQPCDRGMLARGVSVGTFFCGTYFDSEQVVDVVCLKNLDSLLHAMPNLNQIHALIE 260
Query: 172 TYSPILYLHPDEEFQPSSVDWFFSNGALLYQRGKESNPVKIAPNGTNLPQDPHTDGAYWL 231
Y P +Y HPDE++ PSSV WFF NGA+LY G I +GTNLP + DGA+W+
Sbjct: 261 HYGPTVYFHPDEKYMPSSVSWFFKNGAILYTAGNAKGKA-IDYHGTNLPGGGYNDGAFWI 319
Query: 232 DLPADADNKERVKKGDLQSFESYVHVKPMLGGTFTDLAMWVFYPFNGPARAKVEFFNVKL 291
DLP D D + +KKG+++S E YVHVKP LGG FTD+AMWVF PFNGPA KV N+++
Sbjct: 320 DLPTDEDARSNLKKGNIESAELYVHVKPALGGAFTDIAMWVFCPFNGPATLKVSLMNIEM 379
Query: 292 GRIGEHVGDWEHVTLRISNFDGQLWKVYFAQHSKGAWVDSSQIEFQSDNNVNRPVVYSSL 351
+IGEHVGDWEH TLR+SNF G+LW V+F++HS G WV++ +EF + N+P+VYSS
Sbjct: 380 NKIGEHVGDWEHFTLRVSNFTGELWSVFFSEHSGGKWVNAFDLEFIKE---NKPIVYSSR 436
Query: 352 HGHASYPHPGLILQG--KNGIGIRNDTAKSASVLDMR-KCVLISTEYLGSSAVVEPPWLN 408
HGHASYPH G LQG K GIG+RND AKS +LD + +++ EYLG + EP WL
Sbjct: 437 HGHASYPHAGTYLQGSSKLGIGVRNDAAKSNFILDSSFRYKIVAAEYLGDGVITEPCWLQ 496
Query: 409 YFREWGPKIDYNIDDELKKVEKFLPGKLKTAFENIIKSLPNEVLGEEGPTGPKAKNNWSG 468
Y REWGP I Y+ E++K+ LP ++ + EN+ + P E+ GEEGPTGPK K+NW G
Sbjct: 497 YMREWGPTIVYDSRSEIEKIIDMLPIFVRFSVENLFELFPTELSGEEGPTGPKEKDNWLG 556
Query: 469 DE 470
DE
Sbjct: 557 DE 558
>Medtr4g077620.1 | pre-mRNA processing protein PRP39, putative | HC
| chr4:29719096-29721915 | 20130731
Length = 569
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/485 (48%), Positives = 316/485 (65%), Gaps = 22/485 (4%)
Query: 1 MLGSYGQPNNQPLFGWILVAKDVSSTSS--------ALKKPLDYTLVWNS---ASVKVSQ 49
+LG Y QP+++PL G++LVAK+ S AL+ PLD+ LVW+S AS+++S
Sbjct: 90 ILGHYCQPSDKPLRGFVLVAKETRIHFSETNVEKLPALRNPLDFELVWSSNAPASLEISS 149
Query: 50 DSPGYVWLPKAPDGYKALGHVVTTTPDKPSLDKIKCVRQDLTEQCEAYSWIWGTGGDSDP 109
GY WLP+ P+GYKA+G++VT P+KP LD++ CVR DLT++CE Y +
Sbjct: 150 GC-GYFWLPEPPEGYKAVGYLVTDKPEKPKLDEMCCVRADLTDKCEPYHVKFAVASKIPE 208
Query: 110 NSFNFYAVRPSNRGTQALGVGVGAFVAQNGGTNSSLS-ITCLKNTNAISKSMPNLKQIGA 168
SF + RP +RG GV VG F+ +G +N + I CLKN NA +SMPNL+QI
Sbjct: 209 LSFQLSSSRPCDRGMLGKGVCVGTFLCSSGLSNGEENPIACLKNLNAALQSMPNLQQIHG 268
Query: 169 LLQTYSPILYLHPDEEFQPSSVDWFFSNGALLYQRGKESNPVKIAPNGTNLPQDPHTDGA 228
L+ Y P ++ HP+E + PSSVDWFFSNGALL ++G + I G+NLP DG
Sbjct: 269 LINHYGPTVFFHPEEIYLPSSVDWFFSNGALLCRKGMCTGE-GIDATGSNLPSGGSNDGQ 327
Query: 229 YWLDLPADADNKERVKKGDLQSFESYVHVKPMLGGTFTDLAMWVFYPFNGPARAKVEFFN 288
+W++LP+D D ++ +K+GDL S + YVHVKP LGGTFTD+AMW+F PFNGPA KV N
Sbjct: 328 FWIELPSD-DRRDFIKRGDLNSAKLYVHVKPALGGTFTDIAMWIFCPFNGPATLKVGIKN 386
Query: 289 VKLGRIGEHVGDWEHVTLRISNFDGQLWKVYFAQHSKGAWVDSSQIEFQSDNNVNRPVVY 348
+ L +IGEHVGDWEH TLRI NF G+L+ +YF+QHS G W+D+ +++ N+ +VY
Sbjct: 387 IPLSKIGEHVGDWEHFTLRICNFAGELYSIYFSQHSGGEWMDTCDLDYIDG---NKAIVY 443
Query: 349 SSLHGHASYPHPGLILQG--KNGIGIRNDTAKSASVLDMR-KCVLISTEYLGSSAVVEPP 405
SS GHASYP PG +QG K G+GIRND +S +D +++ EYL + V EP
Sbjct: 444 SSKSGHASYPRPGTYIQGSSKLGLGIRNDAVRSNLYVDSSIHYEVVAAEYL-ENVVAEPN 502
Query: 406 WLNYFREWGPKIDYNIDDELKKVEKFLPGKLKTAFENIIKSLPNEVLGEEGPTGPKAKNN 465
WL + R+WGPKI Y+ EL KV LP L+ + ++I LP E+ GEEGPTGPK KNN
Sbjct: 503 WLQFMRKWGPKIIYDSKTELDKVINALPRMLQYSMRDLINKLPVELYGEEGPTGPKEKNN 562
Query: 466 WSGDE 470
W DE
Sbjct: 563 WIHDE 567
>Medtr5g007860.1 | pre-mRNA processing protein PRP39, putative | HC
| chr5:1557823-1554876 | 20130731
Length = 607
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/489 (47%), Positives = 314/489 (64%), Gaps = 24/489 (4%)
Query: 1 MLGSYGQPNNQPLFGWILVAKDVSSTS----------SALKKPLDYTLVW--NSASVKVS 48
+LG Y QP+ +PL+G++L AK V+ +S AL+ PLD+ LVW NS K++
Sbjct: 122 ILGHYCQPSYKPLWGFVLAAKQVADSSYNNICNQNKLPALRNPLDFALVWCTNSGRKKIA 181
Query: 49 Q--DSPGYVWLPKAPDGYKALGHVVTTTPDKPSLDKIKCVRQDLTEQCEAYSWIWGTGGD 106
DS Y WLP+ P+GYKALG++VT +KP+LD+I CVR DLT++CE Y + G
Sbjct: 182 MPVDSAAYFWLPQPPEGYKALGYLVTNNREKPNLDEISCVRVDLTDKCEPYRTLLDAGNI 241
Query: 107 SDPNSFNFYAVRPSNRGTQALGVGVGAFVAQNGGTNS--SLSITCLKNTNAISKSMPNLK 164
F +++RP +RG GV VG F N+ L + CLKN N +MP +
Sbjct: 242 IPEFPFWAWSLRPCDRGMLGKGVSVGTFYCSGCCWNNGEELPVVCLKNLNPTPSAMPWID 301
Query: 165 QIGALLQTYSPILYLHPDEEFQPSSVDWFFSNGALLYQRGKESNPVKIAPNGTNLPQDPH 224
QI AL++ Y P ++ HP+E + PSSVDWFF+NGALLY++G S I G+NLP
Sbjct: 302 QIHALIEHYGPTVFFHPEEIYLPSSVDWFFNNGALLYRKGV-SEGETIDEGGSNLPGGGT 360
Query: 225 TDGAYWLDLPADADNKERVKKGDLQSFESYVHVKPMLGGTFTDLAMWVFYPFNGPARAKV 284
DG +W+DLP D +E +K GDL+S + YVHVKP GGTFTD+ MW+F PFNGP+ K
Sbjct: 361 NDGEFWIDLPNDKSRREFIKHGDLESAKLYVHVKPAFGGTFTDIVMWIFCPFNGPSTLKF 420
Query: 285 EFFNVKLGRIGEHVGDWEHVTLRISNFDGQLWKVYFAQHSKGAWVDSSQIEFQSDNNVNR 344
++ ++GEH+GDWEH TLRISNF G+LW +Y++QHS G WVD+ ++E+ N+
Sbjct: 421 GMKSMAFSKVGEHIGDWEHFTLRISNFTGELWSIYYSQHSGGKWVDAYELEYIDG---NK 477
Query: 345 PVVYSSLHGHASYPHPGLILQG--KNGIGIRNDTAKSASVLDMR-KCVLISTEYLGSSAV 401
+VY+S +GHASYPHPG +QG K GIGIRND +S +D +++ YLG V
Sbjct: 478 AIVYASKNGHASYPHPGTYIQGSSKLGIGIRNDARRSNLRVDSSVHYEIVAAAYLG-DVV 536
Query: 402 VEPPWLNYFREWGPKIDYNIDDELKKVEKFLPGKLKTAFENIIKSLPNEVLGEEGPTGPK 461
EP WL Y R+WGPKI Y+ EL K+ LP +L+++F N+ + LP E+ GEEGPTGPK
Sbjct: 537 KEPQWLQYMRQWGPKIVYDSKTELDKILNSLPLRLRSSFGNLFRKLPVELYGEEGPTGPK 596
Query: 462 AKNNWSGDE 470
KNNW GDE
Sbjct: 597 EKNNWIGDE 605
>Medtr5g013780.1 | vacuolar protein sorting protein | HC |
chr5:4444545-4498541 | 20130731
Length = 4324
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 29/167 (17%)
Query: 1 MLGSYGQPNNQPLFGWILVAKDVSSTSSALKKPLDYTLVW------------NSASVKVS 48
+LG Y P ++P +L V++ S +K+P+ + L+W + S K
Sbjct: 1999 VLGDYLTPLDKPPTKGVLA---VNTNSITVKRPIHFRLIWPPLGTSGEEMDNSDLSWKTE 2055
Query: 49 QDSPGYVWLPKAPDGYKALGHVVTTTPDKPSLDKIKCVRQDLTEQCEAYSWIWGTGGDSD 108
D +W P+AP GY ALG +VT P L C+ C I ++
Sbjct: 2056 VDDSCSIWFPQAPKGYVALGCIVTQGRTPPPLSSALCIPSSSVSLCSLRDCIMIGMPNTS 2115
Query: 109 PNSFNFYAVRPSNRGTQALGVGVGAFVAQNGGTNSSLS----ITCLK 151
+S F+ V S G F+ + T+S +S + C+K
Sbjct: 2116 SSSVRFWRVDNS----------FGTFLPVDPTTHSLMSKAYELRCIK 2152