Miyakogusa Predicted Gene

Lj3g3v0935530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0935530.1 Non Characterized Hit- tr|K4D0D7|K4D0D7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.67,1e-18,FAMILY NOT NAMED,NULL; DUF936,Protein of unknown
function DUF936, plant; seg,NULL,CUFF.41650.1
         (335 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g062300.1 | DUF936 family protein | HC | chr2:26297458-263...   374   e-104
Medtr2g099095.1 | DUF936 family protein | HC | chr2:42469319-424...   125   7e-29
Medtr4g068050.1 | DUF936 family protein | HC | chr4:25499155-254...   122   4e-28
Medtr0050s0010.1 | DUF936 family protein | HC | scaffold0050:409...   114   1e-25
Medtr5g034370.1 | DUF936 family protein | HC | chr5:14898529-149...   103   2e-22
Medtr4g112035.1 | DUF936 family protein | HC | chr4:46356557-463...   100   2e-21

>Medtr2g062300.1 | DUF936 family protein | HC |
           chr2:26297458-26302015 | 20130731
          Length = 585

 Score =  374 bits (960), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/363 (60%), Positives = 249/363 (68%), Gaps = 44/363 (12%)

Query: 1   MASLTPGVLSKLLQNAGNKVTGEHRQALLQVTEIVPRLSDDTWQPSTTGGGYFLKLSDSL 60
           MASLTPGVLSKLLQN+ +  T  HRQ LLQVTEI+PRLS+DT+QP+T   GYFLKLSDSL
Sbjct: 1   MASLTPGVLSKLLQNSTS--TNTHRQPLLQVTEIIPRLSEDTFQPAT---GYFLKLSDSL 55

Query: 61  HAAYVSVSDHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPLPKRRPCVG 120
           H+AYVSVSD D++LIRSDKL+LGQFVYVT          +S +P V GL  + KRR CVG
Sbjct: 56  HSAYVSVSDSDAELIRSDKLQLGQFVYVTRF----DNDASSSVPRVSGLKTISKRRACVG 111

Query: 121 NPTDLVSSLALPSTPKLHFRXXXXXXXXXXXXXXXXXXXXXXXXXXEEARRLSLDSA-RR 179
           NP DLVS+ +L                                    E RRLSLDS+ RR
Sbjct: 112 NPVDLVSTDSLR-------LATAKLNGNVKKKKKINGNKDNNVVVNVEMRRLSLDSSTRR 164

Query: 180 VWDAS----------------ISRFKF-KSNPTSPNVIDKKVSLKTD--SPLKSP-TSIV 219
           VWD +                 SRF F KS  TSPNVIDKKVS+K D  SPLKSP TSIV
Sbjct: 165 VWDHASLVSKTKSSSSPSSNSSSRFTFSKSASTSPNVIDKKVSMKIDSHSPLKSPSTSIV 224

Query: 220 SPLKSKNENLCPKSTSTPPRKS-----IAKSPSA--GTVPGQLVKVPLNFKTWCDKSSSW 272
           SPLK+KNENLCPK+T TPPRKS     I KSP A  G+VP +LVKVPL FKTW DKS SW
Sbjct: 225 SPLKNKNENLCPKTTGTPPRKSATTIPIPKSPCAGNGSVPSKLVKVPLKFKTWYDKSGSW 284

Query: 273 DNLPLPMCNLGKKVIAHRNVAFFAAVRSLEEASATDTVVQCLGMFAEICHSCRTLSAGLL 332
           DNLP P+CNLGK+V+ HRNVAF AAVRSLEEASA DTV+QC+ MFAE+C S +TLSAGLL
Sbjct: 285 DNLPPPICNLGKQVVTHRNVAFLAAVRSLEEASAADTVLQCMCMFAELCESRQTLSAGLL 344

Query: 333 VKQ 335
           VKQ
Sbjct: 345 VKQ 347


>Medtr2g099095.1 | DUF936 family protein | HC |
           chr2:42469319-42464410 | 20130731
          Length = 742

 Score =  125 bits (313), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 68/139 (48%), Positives = 89/139 (64%), Gaps = 22/139 (15%)

Query: 1   MASLTPGVLSKLLQ--NAGNKVTGEHRQALLQVTEIVPRLSDDTWQPSTTGG------GY 52
           MA+L PGVL KLLQ  N   KV GEHR +LLQV  IVP L+        +GG      G+
Sbjct: 1   MANLVPGVLLKLLQHMNTDVKVGGEHRSSLLQVVSIVPALA--------SGGELFPNQGF 52

Query: 53  FLKLSDSLHAAYVSVSDHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPL 112
           +LK+SDS HA YVS+ D   DLI SDK++LGQFV+V           +SP+P++RG+ P+
Sbjct: 53  YLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFVFVDRF------EASSPVPVIRGVKPV 106

Query: 113 PKRRPCVGNPTDLVSSLAL 131
           P R PCVG P D+V++ +L
Sbjct: 107 PGRHPCVGTPEDIVATHSL 125



 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 3/94 (3%)

Query: 235 STPPRKSIAKSP---SAGTVPGQLVKVPLNFKTWCDKSSSWDNLPLPMCNLGKKVIAHRN 291
           S+  R SI K     S   +PG +VKV L  +   D S  W +LP  +  LGK+V+ HR+
Sbjct: 370 SSKQRTSIGKKSAEVSNNGLPGNMVKVSLGSRKVTDASVQWTSLPSSISKLGKEVMKHRD 429

Query: 292 VAFFAAVRSLEEASATDTVVQCLGMFAEICHSCR 325
            A  AA+ +++EA+A ++++QCL M++E+ +S +
Sbjct: 430 SAQLAAIEAMQEAAAAESLLQCLSMYSELTNSAK 463


>Medtr4g068050.1 | DUF936 family protein | HC |
           chr4:25499155-25494660 | 20130731
          Length = 727

 Score =  122 bits (307), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 86/133 (64%), Gaps = 11/133 (8%)

Query: 1   MASLTPGVLSKLLQ--NAGNKVTGEHRQALLQVTEIVPRLSDDTWQPSTTGGGYFLKLSD 58
           MA+L PGVL KL+Q  N   KV GEHR +LLQV  IVP L+        T  G+++K+SD
Sbjct: 1   MANLVPGVLLKLMQHMNTDIKVGGEHRSSLLQVVSIVPALAGGDL---FTNQGFYVKVSD 57

Query: 59  SLHAAYVSVSDHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPLPKRRPC 118
           S HA YVS+ D   DLI SDK++LGQFV+V           ASP+P++RG+ P+P R  C
Sbjct: 58  SSHATYVSLPDEHDDLILSDKIQLGQFVFVDRF------EAASPVPILRGVRPVPGRHAC 111

Query: 119 VGNPTDLVSSLAL 131
           VG P D+V++ +L
Sbjct: 112 VGTPEDIVATNSL 124



 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 5/136 (3%)

Query: 195 TSPNVIDKKVSLKTDSPLKS---PTSIVSPLKSKNEN--LCPKSTSTPPRKSIAKSPSAG 249
           +S     K    KT +P KS      I   +K  N +  +  +  +T PR S  K  S  
Sbjct: 314 SSEKFTSKDYESKTQTPTKSSKEENKIQKSIKKVNGDGIMEEQEKATKPRNSFGKKSSEA 373

Query: 250 TVPGQLVKVPLNFKTWCDKSSSWDNLPLPMCNLGKKVIAHRNVAFFAAVRSLEEASATDT 309
            +PG  VKV +N K   + S  W +LP  +  LG++V+ HR+ A  AA  +++EA+A D+
Sbjct: 374 GLPGNFVKVSINSKKVTEASVQWTSLPSSIAKLGREVMKHRDAAQMAATEAMQEAAAADS 433

Query: 310 VVQCLGMFAEICHSCR 325
           ++QCL ++AE+ +S +
Sbjct: 434 LLQCLSVYAELSNSAK 449


>Medtr0050s0010.1 | DUF936 family protein | HC |
           scaffold0050:4093-564 | 20130731
          Length = 533

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 87/140 (62%), Gaps = 12/140 (8%)

Query: 1   MASLTPGVLSKLLQ--NAGNKVTGEHRQALLQVTEIVPRLSDDTWQPSTTGGGYFLKLSD 58
           MASL PGVL KLLQ  N+  KV GEHR  LLQV  IVP LS     P+    G+F+K+SD
Sbjct: 1   MASLIPGVLLKLLQTMNSNVKVRGEHRSVLLQVISIVPALSGSELWPNH---GFFIKVSD 57

Query: 59  SLHAAYVSVSDHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPLPKRRPC 118
           S H+ YVS+S  D++LI ++KL+LGQF Y+  +         +P+P++  + P+P R P 
Sbjct: 58  SSHSTYVSLSKEDNELILNNKLQLGQFFYIDKM------EAGTPVPVLVSVRPVPGRHPF 111

Query: 119 VGNPTDLVSSLALPSTPKLH 138
            GNP DL+  +   S  ++H
Sbjct: 112 EGNPKDLMQMME-SSESRMH 130


>Medtr5g034370.1 | DUF936 family protein | HC |
           chr5:14898529-14901782 | 20130731
          Length = 571

 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 80/129 (62%), Gaps = 12/129 (9%)

Query: 1   MASLTPGVLSKLLQ--NAGNKVTGEHRQALLQVTEIVPR-LSDDTWQPSTTGGGYFLKLS 57
           MA+L PG+L KLL   N G K T EHR +LLQVT+IVP  L + +  P     G+++K+S
Sbjct: 1   MATLAPGILVKLLNGLNTGVKPTSEHRNSLLQVTDIVPADLDEKSLFPKQ---GFYIKVS 57

Query: 58  DSLHAAYVSVSDHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPLPKRRP 117
           DS H+ YV++     D + S+K++LGQF+YV  L         SP+P+++G  PLP R P
Sbjct: 58  DSSHSIYVTLPSDQHDFVLSNKMQLGQFIYVDRL------EPGSPVPVLKGAKPLPGRHP 111

Query: 118 CVGNPTDLV 126
            +G P  L+
Sbjct: 112 FIGTPEPLM 120


>Medtr4g112035.1 | DUF936 family protein | HC |
           chr4:46356557-46359609 | 20130731
          Length = 666

 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/141 (44%), Positives = 86/141 (60%), Gaps = 14/141 (9%)

Query: 1   MASLTPGVLSKLLQ--NAGNKVTGEHRQALLQVTEIVPRLSDDTWQPSTTGGGYFLKLSD 58
           MASLTPG++ KLLQ  N   +VTG+HR  LLQ+  IVP LS        +  G++L LSD
Sbjct: 1   MASLTPGLILKLLQAMNTDTRVTGDHRSPLLQLIGIVPALSSSDL---FSNEGFYLNLSD 57

Query: 59  SLHAAYVSVSDHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPLPKRRPC 118
           SL++ YV +S  D+DLI +++L+LGQF+YV            SP+P V  + PLP R   
Sbjct: 58  SLNSTYVLLSHPDTDLILNNRLQLGQFLYVDRFHFH------SPLPSVTNIRPLPTRHSF 111

Query: 119 VGNPTDLVSSLALPSTPKLHF 139
           VG P  LV+ ++ P+T   HF
Sbjct: 112 VGTPEPLVARIS-PTT--RHF 129