Miyakogusa Predicted Gene
- Lj3g3v0928110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0928110.1 tr|D7KSJ4|D7KSJ4_ARALL Zinc finger family protein
OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_,48.39,1e-18,RING/U-box,NULL; no description,Zinc
finger, RING/FYVE/PHD-type; Ring finger,Zinc finger,
RING-type;,CUFF.41620.1
(345 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g029440.2 | zinc finger, C3HC4 type (RING finger) protein ... 211 8e-55
Medtr4g029440.1 | zinc finger, C3HC4 type (RING finger) protein ... 211 1e-54
Medtr2g061230.1 | zinc finger, C3HC4 type (RING finger) protein ... 160 2e-39
Medtr7g093390.2 | zinc finger, C3HC4 type (RING finger) protein ... 133 2e-31
Medtr7g093390.3 | zinc finger, C3HC4 type (RING finger) protein ... 133 2e-31
Medtr7g093390.1 | zinc finger, C3HC4 type (RING finger) protein ... 133 2e-31
Medtr7g093390.4 | zinc finger, C3HC4 type (RING finger) protein ... 133 2e-31
Medtr1g054260.1 | zinc finger, C3HC4 type (RING finger) protein ... 112 4e-25
Medtr1g054210.1 | zinc finger, C3HC4 type (RING finger) protein ... 111 8e-25
Medtr1g054465.1 | zinc finger, C3HC4 type (RING finger) protein ... 109 4e-24
Medtr1g054280.1 | zinc finger, C3HC4 type (RING finger) protein ... 107 2e-23
Medtr5g019300.1 | zinc finger, C3HC4 type (RING finger) protein ... 92 6e-19
Medtr2g090325.1 | zinc finger, C3HC4 type (RING finger) protein ... 92 8e-19
Medtr1g021895.1 | zinc finger, C3HC4 type (RING finger) protein ... 91 1e-18
Medtr1g021895.2 | zinc finger, C3HC4 type (RING finger) protein ... 91 1e-18
Medtr2g090330.3 | zinc finger, C3HC4 type (RING finger) protein ... 91 2e-18
Medtr2g090330.1 | zinc finger, C3HC4 type (RING finger) protein ... 91 2e-18
Medtr2g090330.2 | zinc finger, C3HC4 type (RING finger) protein ... 91 2e-18
Medtr2g090295.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 87 2e-17
Medtr8g465910.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 87 2e-17
Medtr4g088875.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 84 3e-16
Medtr2g013550.2 | E3 ubiquitin-protein ligase RMA1H1-like protei... 82 1e-15
Medtr2g013550.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 82 1e-15
Medtr2g013550.3 | E3 ubiquitin-protein ligase RMA1H1-like protei... 82 1e-15
Medtr4g088870.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 79 4e-15
Medtr1g015390.1 | peroxisome biogenesis factor 10 | HC | chr1:38... 51 2e-06
Medtr1g044120.1 | DNA repair helicase rad5,16, putative | HC | c... 50 3e-06
>Medtr4g029440.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:10176191-10172035 | 20130731
Length = 425
Score = 211 bits (537), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 199/357 (55%), Gaps = 43/357 (12%)
Query: 6 LYPIQERLRILEGTTSTGESVTVDSDVQ-DEGRVHREEVGSDVEKAAREGWDLRKRKSAY 64
L P R+++ T GE+ T DVQ +E R R + G E+ E KRKS++
Sbjct: 49 LPPSSSRIQV---TNVIGETATA-GDVQGEERREERNDAGQ--EEGIVESVKGGKRKSSH 102
Query: 65 LVAKALGLETYTD-EAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVA 123
L+AKALG+E + + E SG+F+DCNICL++ARDPVLTCCGHLFCWPCFY+LSYAYS A
Sbjct: 103 LIAKALGMEEIDNGKVEESSGNFFDCNICLDIARDPVLTCCGHLFCWPCFYQLSYAYSKA 162
Query: 124 KECPVCKGEVTEASIIPIY--GSASVDCIDKLGSEGDALIVPDRPHASRIESIRQQCRSP 181
KECPVCKGEVTE+ IIPIY G+ DC ++ G L VP RP A R+ESIRQ+ +
Sbjct: 163 KECPVCKGEVTESGIIPIYGHGNGGGDCQMEMKEAG--LRVPPRPKAPRVESIRQKLLTQ 220
Query: 182 TATPIHEMM-ISYLLHNLASFEEQFQFETPGATT-SRPNDLAAQSRQEAENSQHTSSYQF 239
A+ + I + + F EQ Q E+P +TT R N L QSR + +N++H S Q
Sbjct: 221 GASSSSIVQSIRRFQNRIGGFGEQVQLESPTSTTPDRNNGLPVQSRTQTDNNEHGGSQQV 280
Query: 240 STL-----PLHEDASLSYDLAIDHLDILFREFESF---HMRLVSDNRGSPFSIVAISGRP 291
S L S + + A+D + L ++ ES+ H S + P A++
Sbjct: 281 SRLLEQGASSFSSLSSALNSAMDSAERLVQDLESYINGHNTGGSREQNPP----AVTRNS 336
Query: 292 NGDVAATNS--------------ATPSFVSPISSE-DDFN--AVSDTDIHTTNSSTQ 331
VAATN A + VSP+S D+ + AV+ + IHTT+ + Q
Sbjct: 337 TLGVAATNQSESRARDVDLTNSVAAAASVSPLSRNVDNVDNVAVTGSQIHTTDRNVQ 393
>Medtr4g029440.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:10176191-10172035 | 20130731
Length = 431
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 199/357 (55%), Gaps = 43/357 (12%)
Query: 6 LYPIQERLRILEGTTSTGESVTVDSDVQ-DEGRVHREEVGSDVEKAAREGWDLRKRKSAY 64
L P R+++ T GE+ T DVQ +E R R + G E+ E KRKS++
Sbjct: 55 LPPSSSRIQV---TNVIGETATA-GDVQGEERREERNDAGQ--EEGIVESVKGGKRKSSH 108
Query: 65 LVAKALGLETYTD-EAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVA 123
L+AKALG+E + + E SG+F+DCNICL++ARDPVLTCCGHLFCWPCFY+LSYAYS A
Sbjct: 109 LIAKALGMEEIDNGKVEESSGNFFDCNICLDIARDPVLTCCGHLFCWPCFYQLSYAYSKA 168
Query: 124 KECPVCKGEVTEASIIPIY--GSASVDCIDKLGSEGDALIVPDRPHASRIESIRQQCRSP 181
KECPVCKGEVTE+ IIPIY G+ DC ++ G L VP RP A R+ESIRQ+ +
Sbjct: 169 KECPVCKGEVTESGIIPIYGHGNGGGDCQMEMKEAG--LRVPPRPKAPRVESIRQKLLTQ 226
Query: 182 TATPIHEMM-ISYLLHNLASFEEQFQFETPGATT-SRPNDLAAQSRQEAENSQHTSSYQF 239
A+ + I + + F EQ Q E+P +TT R N L QSR + +N++H S Q
Sbjct: 227 GASSSSIVQSIRRFQNRIGGFGEQVQLESPTSTTPDRNNGLPVQSRTQTDNNEHGGSQQV 286
Query: 240 STL-----PLHEDASLSYDLAIDHLDILFREFESF---HMRLVSDNRGSPFSIVAISGRP 291
S L S + + A+D + L ++ ES+ H S + P A++
Sbjct: 287 SRLLEQGASSFSSLSSALNSAMDSAERLVQDLESYINGHNTGGSREQNPP----AVTRNS 342
Query: 292 NGDVAATNS--------------ATPSFVSPISSE-DDFN--AVSDTDIHTTNSSTQ 331
VAATN A + VSP+S D+ + AV+ + IHTT+ + Q
Sbjct: 343 TLGVAATNQSESRARDVDLTNSVAAAASVSPLSRNVDNVDNVAVTGSQIHTTDRNVQ 399
>Medtr2g061230.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:25954060-25951976 | 20130731
Length = 237
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 121/200 (60%), Gaps = 7/200 (3%)
Query: 16 LEGTTSTGESVTVDSDVQD-EGRVHREEVGSDVEKAAREGWDLRKRKSAYLVAKALGLET 74
++ T GE +T +V+D E + EEV E A E KRK+ LVA ALG+ T
Sbjct: 39 IQITNFDGEQLTKTDNVEDDESWMTMEEV----EGATLECKKTCKRKAPCLVANALGMVT 94
Query: 75 YTDEAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVAKECPVCKGEVT 134
+ G + +F+DCNICL+ A +PVLTCCGHLFCW CFY+L+YAYS AKECPVC+GEV
Sbjct: 95 SANGVGGRTRNFFDCNICLDTANNPVLTCCGHLFCWECFYQLAYAYSNAKECPVCEGEVL 154
Query: 135 EASIIPIYGSASVDCIDKLGSEGDALIVPDRPHASRIESIRQQCRSPTATPIHEMMISYL 194
+ IIP+YG+ +D I +L + L VPDRPHA R+ES RQ+ R T ++ + L
Sbjct: 155 DTDIIPVYGNGMIDDISRLELKETCLRVPDRPHAPRVESTRQRRRRRTVASTNQDL--SL 212
Query: 195 LHNLASFEEQFQFETPGATT 214
N EE + P +T
Sbjct: 213 FGNFGGLEEPDPMQFPSIST 232
>Medtr7g093390.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118841-37122307 | 20130731
Length = 453
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 79/116 (68%), Gaps = 4/116 (3%)
Query: 76 TDEAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVAKECPVCKGEVTE 135
++A G G F+DCNICL++A++PVLTCCGHLFCW C YR + +S A+ECPVCKGEVT
Sbjct: 159 VEKAGGGDGDFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDARECPVCKGEVTI 218
Query: 136 ASIIPIYGSASVDCIDKLGSEGDALIVPDRPHASRIESIRQQC-RSPTATPIHEMM 190
S+ PIYG + ++ E L +P RP A R+ES+RQ R+ A P+ EM+
Sbjct: 219 KSVTPIYGRGNS---TRVLEEDSTLKIPPRPQAKRVESLRQTLQRNAFAFPVEEMI 271
>Medtr7g093390.3 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118841-37121989 | 20130731
Length = 453
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 79/116 (68%), Gaps = 4/116 (3%)
Query: 76 TDEAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVAKECPVCKGEVTE 135
++A G G F+DCNICL++A++PVLTCCGHLFCW C YR + +S A+ECPVCKGEVT
Sbjct: 159 VEKAGGGDGDFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDARECPVCKGEVTI 218
Query: 136 ASIIPIYGSASVDCIDKLGSEGDALIVPDRPHASRIESIRQQC-RSPTATPIHEMM 190
S+ PIYG + ++ E L +P RP A R+ES+RQ R+ A P+ EM+
Sbjct: 219 KSVTPIYGRGNS---TRVLEEDSTLKIPPRPQAKRVESLRQTLQRNAFAFPVEEMI 271
>Medtr7g093390.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118817-37121936 | 20130731
Length = 453
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 79/116 (68%), Gaps = 4/116 (3%)
Query: 76 TDEAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVAKECPVCKGEVTE 135
++A G G F+DCNICL++A++PVLTCCGHLFCW C YR + +S A+ECPVCKGEVT
Sbjct: 159 VEKAGGGDGDFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDARECPVCKGEVTI 218
Query: 136 ASIIPIYGSASVDCIDKLGSEGDALIVPDRPHASRIESIRQQC-RSPTATPIHEMM 190
S+ PIYG + ++ E L +P RP A R+ES+RQ R+ A P+ EM+
Sbjct: 219 KSVTPIYGRGNS---TRVLEEDSTLKIPPRPQAKRVESLRQTLQRNAFAFPVEEMI 271
>Medtr7g093390.4 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118817-37122307 | 20130731
Length = 453
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 79/116 (68%), Gaps = 4/116 (3%)
Query: 76 TDEAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVAKECPVCKGEVTE 135
++A G G F+DCNICL++A++PVLTCCGHLFCW C YR + +S A+ECPVCKGEVT
Sbjct: 159 VEKAGGGDGDFFDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDARECPVCKGEVTI 218
Query: 136 ASIIPIYGSASVDCIDKLGSEGDALIVPDRPHASRIESIRQQC-RSPTATPIHEMM 190
S+ PIYG + ++ E L +P RP A R+ES+RQ R+ A P+ EM+
Sbjct: 219 KSVTPIYGRGNS---TRVLEEDSTLKIPPRPQAKRVESLRQTLQRNAFAFPVEEMI 271
>Medtr1g054260.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23305014-23305622 | 20130731
Length = 202
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 66/100 (66%), Gaps = 9/100 (9%)
Query: 81 GFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYR-------LSYAY-SVAKECPVCKGE 132
G FYDCNIC +A+DPVLTCCGHLFCWPC YR LS+ S+AKECPVCKGE
Sbjct: 81 GNDRGFYDCNICFVLAKDPVLTCCGHLFCWPCLYRWLNTKSPLSFTRSSLAKECPVCKGE 140
Query: 133 VTEASIIPIYGSAS-VDCIDKLGSEGDALIVPDRPHASRI 171
VT+ ++ PIYG + V+ + S L +P RP+A R+
Sbjct: 141 VTDKTVTPIYGGGNDVEVVRAEDSSSTTLQIPPRPNARRV 180
>Medtr1g054210.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23234618-23235307 | 20130731
Length = 229
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 76 TDEAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVA-KECPVCKGEVT 134
D G G FYDCNICL +A+DPV+T CGHLFCWPC YR ++ S KECPVCKGEV
Sbjct: 111 VDNGCGSKGGFYDCNICLGLAKDPVVTRCGHLFCWPCLYRWLHSGSYGNKECPVCKGEVK 170
Query: 135 EASIIPIYGSASVDCIDKLGSEGDA--LIVPDRPHASRIESIRQQCR 179
+ +IPIYG + D ++G E + L +P RP+A R +S +Q R
Sbjct: 171 DKKVIPIYGGGN-DV--EVGHEDSSSTLQIPRRPNARRKDSNARQSR 214
>Medtr1g054465.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23552590-23553177 | 20130731
Length = 195
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 69/104 (66%), Gaps = 10/104 (9%)
Query: 76 TDEAE-GFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYR-------LSYAY-SVAKEC 126
DE + G FYDCNIC ++A++PVLTCCGHLFCWPC YR LS+ S+AKEC
Sbjct: 43 VDEKDCGNDRGFYDCNICFDLAKEPVLTCCGHLFCWPCLYRWLNTKSPLSFRRSSLAKEC 102
Query: 127 PVCKGEVTEASIIPIYGSAS-VDCIDKLGSEGDALIVPDRPHAS 169
PVCKGEVT+ ++ PIYG + V+ + S L +P RP+AS
Sbjct: 103 PVCKGEVTDKTVTPIYGGGNEVEVVRAEDSSSTTLQIPPRPNAS 146
>Medtr1g054280.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23323943-23324740 | 20130731
Length = 265
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 76 TDEAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYR-LSYAYSVAKECPVCKGEVT 134
++ G GS +DCNICL++A++PV+TCCGHLFCWPC YR L S K CPVCKGEVT
Sbjct: 65 VEKGGGSEGSVFDCNICLDLAKNPVVTCCGHLFCWPCLYRWLHLRSSQTKACPVCKGEVT 124
Query: 135 EASIIPIYGSASVDCIDKLGSEGDALIVPDRPHASRIESIRQQ 177
+ ++IPIYG + + + L +P RP A + + Q
Sbjct: 125 DKNVIPIYGGEN-NVEVRHEDSSSTLQIPSRPKARHVSNDSSQ 166
>Medtr5g019300.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr5:7292943-7291465 | 20130731
Length = 239
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 87 YDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVAKECPVCKGEVTEASIIPIYGSAS 146
++CNIC ++A+DPV+T CGHLFCWPC YR + +S ++ECPVCK V E ++P+YG
Sbjct: 35 FECNICFDLAQDPVITLCGHLFCWPCLYRWLHHHSHSQECPVCKALVQEEKLVPLYGRGK 94
Query: 147 VDCIDKLGSEGDALIVPDRPHASRIES 173
D + +P RP R ++
Sbjct: 95 TQ-TDPRTKSYPGMEIPRRPSGQRPQT 120
>Medtr2g090325.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr2:38420153-38419551 | 20130731
Length = 200
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 85 SFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVAKECPVCKGEVTEASIIPIYGS 144
S +DCNICLE +DPV+T CGHL+CWPC Y+ + +CPVCK E++E++++P+YG
Sbjct: 16 SGFDCNICLENVQDPVVTLCGHLYCWPCIYKWLNTRNEKSQCPVCKLEISESTLVPLYGR 75
Query: 145 ASVDCIDKLGSEGDALIVPDRP 166
K S ++VP RP
Sbjct: 76 G------KTTSTSKGIVVPPRP 91
>Medtr1g021895.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr1:6660200-6658417 | 20130731
Length = 232
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 87 YDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVAKECPVCKGEVTEASIIPIYGSAS 146
++CNIC ++A+DP++T CGHLFCWPC Y+ + +S ++ECPVCK + E ++P+YG
Sbjct: 30 FECNICFDLAQDPIITLCGHLFCWPCLYKWLHFHSQSRECPVCKAMIEEEKLVPLYGRGK 89
Query: 147 VDCIDKLGSEGDALIVPDRPHASRIES 173
D + +P RP R E+
Sbjct: 90 TS-TDPRSKSVPGVNIPHRPAGQRPET 115
>Medtr1g021895.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr1:6660432-6658324 | 20130731
Length = 232
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 87 YDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVAKECPVCKGEVTEASIIPIYGSAS 146
++CNIC ++A+DP++T CGHLFCWPC Y+ + +S ++ECPVCK + E ++P+YG
Sbjct: 30 FECNICFDLAQDPIITLCGHLFCWPCLYKWLHFHSQSRECPVCKAMIEEEKLVPLYGRGK 89
Query: 147 VDCIDKLGSEGDALIVPDRPHASRIES 173
D + +P RP R E+
Sbjct: 90 TS-TDPRSKSVPGVNIPHRPAGQRPET 115
>Medtr2g090330.3 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:38426674-38424779 | 20130731
Length = 166
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Query: 87 YDCNICLEMARDPVLTCCGHLFCWPCFYRL----SYAYSVAKECPVCKGEVTEASIIPIY 142
++CNICLE +DPV+T CGHL+CWPC Y+ S+ ++ ECP+CK E++E++++P+Y
Sbjct: 33 FECNICLEHVKDPVVTLCGHLYCWPCIYKWINSTSWEHNEKPECPICKSEISESTLVPLY 92
Query: 143 GSASVDCIDKLGSEGDALIVPDRPHASR 170
G + + D ++VP RP R
Sbjct: 93 GRGKTTSSSEGEAHQDGVVVPPRPLGPR 120
>Medtr2g090330.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:38425346-38424779 | 20130731
Length = 163
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Query: 87 YDCNICLEMARDPVLTCCGHLFCWPCFYRL----SYAYSVAKECPVCKGEVTEASIIPIY 142
++CNICLE +DPV+T CGHL+CWPC Y+ S+ ++ ECP+CK E++E++++P+Y
Sbjct: 30 FECNICLEHVKDPVVTLCGHLYCWPCIYKWINSTSWEHNEKPECPICKSEISESTLVPLY 89
Query: 143 GSASVDCIDKLGSEGDALIVPDRPHASR 170
G + + D ++VP RP R
Sbjct: 90 GRGKTTSSSEGEAHQDGVVVPPRPLGPR 117
>Medtr2g090330.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:38426674-38424779 | 20130731
Length = 163
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Query: 87 YDCNICLEMARDPVLTCCGHLFCWPCFYRL----SYAYSVAKECPVCKGEVTEASIIPIY 142
++CNICLE +DPV+T CGHL+CWPC Y+ S+ ++ ECP+CK E++E++++P+Y
Sbjct: 30 FECNICLEHVKDPVVTLCGHLYCWPCIYKWINSTSWEHNEKPECPICKSEISESTLVPLY 89
Query: 143 GSASVDCIDKLGSEGDALIVPDRPHASR 170
G + + D ++VP RP R
Sbjct: 90 GRGKTTSSSEGEAHQDGVVVPPRPLGPR 117
>Medtr2g090295.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:38396296-38393419 | 20130731
Length = 247
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
Query: 79 AEGFSGS-FYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVAKE-------CPVCK 130
AE SGS +DCNICLE +DPV+T CGHL+CWPC Y+ ++ +E CPVCK
Sbjct: 31 AEAISGSSGFDCNICLECVQDPVVTLCGHLYCWPCIYKWLNFHAENQEKQKEEPQCPVCK 90
Query: 131 GEVTEASIIPIYGSASVDCIDKLGSEGDALIVPDRP 166
E++++S++P+YG K ++P RP
Sbjct: 91 SEISKSSLVPLYGRGQTTPPSKGNDHQIGSVIPPRP 126
>Medtr8g465910.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr8:23517772-23514789 | 20130731
Length = 244
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 8/96 (8%)
Query: 83 SGSFYDCNICLEMARDPVLTCCGHLFCWPCFYR-LSYAYSVAKE-------CPVCKGEVT 134
+ S +DCNICL+ +DPV+T CGHL+CWPC Y+ L ++ E CPVCK E++
Sbjct: 40 ASSGFDCNICLDCVQDPVVTFCGHLYCWPCIYKWLDIQSGISSENEKQKPQCPVCKSELS 99
Query: 135 EASIIPIYGSASVDCIDKLGSEGDALIVPDRPHASR 170
++S++P+YG + + ++ ++VP RP R
Sbjct: 100 QSSLVPLYGRGQTMTLSEGKAQQVGIVVPRRPTGPR 135
>Medtr4g088875.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr4:35472873-35474936 | 20130731
Length = 231
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 14/116 (12%)
Query: 78 EAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVA------KECPVCKG 131
E E S +DCNICL+ A +PV+T CGHL+CW C Y+ + S + +CPVCK
Sbjct: 22 ETEKNCDSCFDCNICLDFAHEPVVTLCGHLYCWSCIYKWLFVQSASLAPDEPPQCPVCKD 81
Query: 132 EVTEASIIPIYGSASVDCIDKLGSEGDA------LIVPDRPHASRIESIRQQCRSP 181
++ ++P+YG + + + DA + +P RP AS I+S+ SP
Sbjct: 82 GISHTKMVPLYGRGQT--LSRCDRDSDAKPTLEDISIPPRPPASGIQSLLAMATSP 135
>Medtr2g013550.2 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:3664172-3662157 | 20130731
Length = 236
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 78 EAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYS-------VAKECPVCK 130
EAE +G +DCNICL+ A +PV+T CGHL+CWPC Y+ + S +CPVCK
Sbjct: 20 EAEESNG--FDCNICLDFANEPVVTLCGHLYCWPCIYKWLHVQSDDSLGSDEHPQCPVCK 77
Query: 131 GEVTEASIIPIYGSASVDCIDKLGSEGDALIVPDRPHASRIESI 174
++ +++P+YG S D VP RP AS +++
Sbjct: 78 ENISHTTMVPLYGRGGHTPPSGKSSCCDDNFVPPRPTASGAQAL 121
>Medtr2g013550.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:3664296-3662157 | 20130731
Length = 236
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 78 EAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYS-------VAKECPVCK 130
EAE +G +DCNICL+ A +PV+T CGHL+CWPC Y+ + S +CPVCK
Sbjct: 20 EAEESNG--FDCNICLDFANEPVVTLCGHLYCWPCIYKWLHVQSDDSLGSDEHPQCPVCK 77
Query: 131 GEVTEASIIPIYGSASVDCIDKLGSEGDALIVPDRPHASRIESI 174
++ +++P+YG S D VP RP AS +++
Sbjct: 78 ENISHTTMVPLYGRGGHTPPSGKSSCCDDNFVPPRPTASGAQAL 121
>Medtr2g013550.3 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:3664165-3662157 | 20130731
Length = 236
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 78 EAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYS-------VAKECPVCK 130
EAE +G +DCNICL+ A +PV+T CGHL+CWPC Y+ + S +CPVCK
Sbjct: 20 EAEESNG--FDCNICLDFANEPVVTLCGHLYCWPCIYKWLHVQSDDSLGSDEHPQCPVCK 77
Query: 131 GEVTEASIIPIYGSASVDCIDKLGSEGDALIVPDRPHASRIESI 174
++ +++P+YG S D VP RP AS +++
Sbjct: 78 ENISHTTMVPLYGRGGHTPPSGKSSCCDDNFVPPRPTASGAQAL 121
>Medtr4g088870.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr4:35466967-35468099 | 20130731
Length = 199
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 68 KALGLETYTDEAEGFSGSFYDCNICLEMARDPVLTCCGHLFCWPCFY------RLSYAYS 121
KA G E E F DC+ICL+ A +PV+T CGHLFCW C Y R S A
Sbjct: 14 KADGNSVTETEKENIDNCF-DCHICLDFAHEPVVTLCGHLFCWSCIYKWLFVQRASLAPD 72
Query: 122 VAKECPVCKGEVTEASIIPIYGSASVDCIDKLGSEGDALI----VPDRPHASRIESIRQQ 177
+CPVCK +++ ++P+YG + G A + +P RP AS I+S+ +
Sbjct: 73 EHPQCPVCKHDISHTKMVPLYGRGQT-LSSRRGRNRKATLEDISIPPRPPASEIQSLLET 131
Query: 178 CRSPTA 183
SP +
Sbjct: 132 RTSPQS 137
>Medtr1g015390.1 | peroxisome biogenesis factor 10 | HC |
chr1:3820269-3810303 | 20130731
Length = 420
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 88 DCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVAKECPVCKGEVTEASIIPIYGS 144
C +CL + P T CGH+FCW C + ECP+C+ +T +S++ +Y S
Sbjct: 365 KCTLCLSNRQHPTATSCGHVFCWNCITEWC---NEKPECPLCRTPITHSSLVCVYHS 418
>Medtr1g044120.1 | DNA repair helicase rad5,16, putative | HC |
chr1:16509136-16515621 | 20130731
Length = 1153
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 75 YTDEAEGF--SGSFYDCNICLEMARDPVLTCCGHLFCWPCFYRLSYAYSVAKECPVCKGE 132
Y DE G G +C IC+E DPV T C H FC C + + S+ +CP+C+
Sbjct: 901 YIDEVLGHIQKGESVECAICMESPDDPVFTPCAHQFCRECLFN-CWGTSMGGKCPICRQI 959
Query: 133 VTEASII 139
+ + +I
Sbjct: 960 LKKNDLI 966