Miyakogusa Predicted Gene

Lj3g3v0917060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0917060.1 CUFF.41615.1
         (216 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g060910.2 | hypothetical protein | HC | chr2:25847964-2584...   167   6e-42
Medtr2g060910.1 | hypothetical protein | HC | chr2:25847964-2583...   167   9e-42
Medtr4g125960.1 | hypothetical protein | LC | chr4:52322247-5232...   139   2e-33

>Medtr2g060910.2 | hypothetical protein | HC |
           chr2:25847964-25840604 | 20130731
          Length = 283

 Score =  167 bits (424), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 93/175 (53%), Positives = 114/175 (65%), Gaps = 27/175 (15%)

Query: 45  LPIRAPNPQFPKPHDPSSHHYLYPFASSARGGGPFVAKGFGPLPADPTVSGYXXXXXXSL 104
           L +R+PNP            +LYPFAS +R        G+ P P               L
Sbjct: 48  LHVRSPNP------------FLYPFASPSRASANHAVGGYPPPPPPSQPQ-------PPL 88

Query: 105 MYSHG--VRGMHLDYLTHALHMNRP-PHLPYPHTGHAPPASTASPPVKGHTKATARSAAS 161
           +YSHG  VRGM+LDYL+HALH+ RP  H+ +PH      A+TASPPVKGH K TARS  S
Sbjct: 89  LYSHGGGVRGMNLDYLSHALHVTRPLSHVQFPHL-----AATASPPVKGHLKGTARSTVS 143

Query: 162 DVNGHKDTSTRERSRDETFVVIRDRKVRLTENASLYALCRSWLRNGIIEESQPQQ 216
           DVNGH+D++ RERSRD+   V+RDRKVR+TE+ASLYALCRSWLRNG+ +ESQP Q
Sbjct: 144 DVNGHRDSTVRERSRDDALTVVRDRKVRITEDASLYALCRSWLRNGVNDESQPPQ 198


>Medtr2g060910.1 | hypothetical protein | HC |
           chr2:25847964-25838005 | 20130731
          Length = 283

 Score =  167 bits (422), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 91/175 (52%), Positives = 112/175 (64%), Gaps = 27/175 (15%)

Query: 45  LPIRAPNPQFPKPHDPSSHHYLYPFASSARGGGPFVAKGFGPLPADPTVSGYXXXXXXSL 104
           L +R+PNP            +LYPFAS +R        G+                   L
Sbjct: 48  LHVRSPNP------------FLYPFASPSRASANHAVGGY-------PPPPPPSQPQPPL 88

Query: 105 MYSHG--VRGMHLDYLTHALHMNRP-PHLPYPHTGHAPPASTASPPVKGHTKATARSAAS 161
           +YSHG  VRGM+LDYL+HALH+ RP  H+ +PH      A+TASPPVKGH K TARS  S
Sbjct: 89  LYSHGGGVRGMNLDYLSHALHVTRPLSHVQFPHL-----AATASPPVKGHLKGTARSTVS 143

Query: 162 DVNGHKDTSTRERSRDETFVVIRDRKVRLTENASLYALCRSWLRNGIIEESQPQQ 216
           DVNGH+D++ RERSRD+   V+RDRKVR+TE+ASLYALCRSWLRNG+ +ESQP Q
Sbjct: 144 DVNGHRDSTVRERSRDDALTVVRDRKVRITEDASLYALCRSWLRNGVNDESQPPQ 198


>Medtr4g125960.1 | hypothetical protein | LC |
           chr4:52322247-52321179 | 20130731
          Length = 290

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/169 (47%), Positives = 104/169 (61%), Gaps = 18/169 (10%)

Query: 54  FPKPHDPSSHHYLYPFASSARGGGPFVAKGFGPLP---ADPTVSGYXXXXXXSLMYSH-- 108
           FP P+    H+      S+ +G  P     F  L    A+  V  Y       L+YSH  
Sbjct: 43  FPNPNSKPIHY------SNQQGLPPRSLNSFASLSGATANQAVGSYPPPWP-PLLYSHWG 95

Query: 109 GVRGMHLDYLTHALHMNRP-PHLPYPHTGHAPPASTASPPVKGHTKATARSAASDVNGHK 167
            VRG++LD L++ LHM RP  H  +PH      A+T  PP++GH K T+RS  SDVNG+K
Sbjct: 96  SVRGVNLDNLSNTLHMTRPLSHEQFPHL-----AATMPPPIEGHRKGTSRSTVSDVNGYK 150

Query: 168 DTSTRERSRDETFVVIRDRKVRLTENASLYALCRSWLRNGIIEESQPQQ 216
           D S R+RSRD+   V+RDRKVR+TE+ASLYALCRSWLRNG+ +ESQP Q
Sbjct: 151 DASARKRSRDDELTVVRDRKVRITEDASLYALCRSWLRNGLNDESQPPQ 199