Miyakogusa Predicted Gene

Lj3g3v0917040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0917040.1 Non Characterized Hit- tr|D8TCR5|D8TCR5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,37.19,0.00000000000004,SUBFAMILY NOT NAMED,NULL; RAB3-GAP
REGULATORY DOMAIN,Protein N-terminal asparagine
amidohydrolase,CUFF.41614.1
         (148 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g060820.1 | amine-terminal asparagine amidohydrolase | HC ...   275   1e-74

>Medtr2g060820.1 | amine-terminal asparagine amidohydrolase | HC |
           chr2:25786974-25792384 | 20130731
          Length = 378

 Score =  275 bits (703), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 123/147 (83%), Positives = 139/147 (94%)

Query: 2   CVLGHNTRKDSDGKTYPIFNGFVVETATGVVIPASFDRSSRCPDEVVRRIRVSASYEDTS 61
           CVLGHNT++DSDG TYPIFNGFVVETATG VIPASFDRSSRCPDE+VRRIRVS SYED+S
Sbjct: 180 CVLGHNTKRDSDGNTYPIFNGFVVETATGTVIPASFDRSSRCPDEIVRRIRVSVSYEDSS 239

Query: 62  WNGKLLETYDYSTDCFKIAPCRWTLRQYHIALSLQNYSDSELLSICSTSPTAEGPDFVDN 121
           WNGKLLETY+ +TD F+I+PC WT RQYHIALSLQ+YSDSE+LSICSTSPTAEGPDFVD+
Sbjct: 240 WNGKLLETYETATDSFRISPCCWTRRQYHIALSLQHYSDSEILSICSTSPTAEGPDFVDD 299

Query: 122 LKRQWNYLIEHPYWTETFPKRQPRVFA 148
           L+R+WNY+IEHP+WTETFPKRQPR+F 
Sbjct: 300 LRRKWNYIIEHPHWTETFPKRQPRIFT 326