Miyakogusa Predicted Gene

Lj3g3v0893730.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0893730.1 tr|I0Z5P1|I0Z5P1_9CHLO Uroporphyrin-III C-m
OS=Coccomyxa subellipsoidea C-169 PE=3 SV=1,56.63,1e-18,seg,NULL;
TP_methylase,Tetrapyrrole methylase; UROPORPHYRIN-III
METHYLTRANSFERASE,NULL; METHYLTETRAH,CUFF.41627.1
         (220 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g034345.1 | uroporphyrinogen-III C-methyltransferase | HC ...   174   5e-44
Medtr7g034345.2 | uroporphyrinogen-III C-methyltransferase | HC ...   174   7e-44
Medtr3g026780.1 | uroporphyrinogen-III C-methyltransferase | HC ...   138   4e-33

>Medtr7g034345.1 | uroporphyrinogen-III C-methyltransferase | HC |
           chr7:12836672-12833047 | 20130731
          Length = 364

 Score =  174 bits (442), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/190 (54%), Positives = 121/190 (63%), Gaps = 14/190 (7%)

Query: 3   LHKLASFPSLHTPFITNRHYLHRHHRISSLNCTFSASPFTEKHSTERYQRDQWVYQNPQR 62
           LHK+ SF S + P               +   + ++SPFTEK+ST+RYQRDQWVYQN   
Sbjct: 4   LHKITSFSSPNPPLTPQNQ--RNPISSINCTTSSTSSPFTEKYSTQRYQRDQWVYQN--- 58

Query: 63  ETMSC-----PLPSDSGAFREDDIAXXXXXXXXXXXXXXXXXXSEGNCSGGNCEPGDVFL 117
            T SC     P      + RE DIA                  SEG CS G C  GDVFL
Sbjct: 59  -TTSCNNNHTPF---GDSIREHDIALQLPELKKLVQVLKKKRESEGKCSDGKCVSGDVFL 114

Query: 118 VGTGPGDPELLTLKAVRVMESADLLLYDRLVSNDVLDLVSPNAKLLYVGKTAGYHSRTQV 177
           VGTGPGDPELLTLKAVRV++SADLLLYDRLVSNDVLDLV P+AKLLYVGKTAGYHSRTQ 
Sbjct: 115 VGTGPGDPELLTLKAVRVIKSADLLLYDRLVSNDVLDLVGPDAKLLYVGKTAGYHSRTQE 174

Query: 178 KMLAIFLAFS 187
           ++  + L+F+
Sbjct: 175 EIHELLLSFA 184


>Medtr7g034345.2 | uroporphyrinogen-III C-methyltransferase | HC |
           chr7:12836672-12834368 | 20130731
          Length = 334

 Score =  174 bits (440), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 93/150 (62%), Positives = 104/150 (69%), Gaps = 12/150 (8%)

Query: 43  EKHSTERYQRDQWVYQNPQRETMSC-----PLPSDSGAFREDDIAXXXXXXXXXXXXXXX 97
           EK+ST+RYQRDQWVYQN    T SC     P      + RE DIA               
Sbjct: 42  EKYSTQRYQRDQWVYQN----TTSCNNNHTPF---GDSIREHDIALQLPELKKLVQVLKK 94

Query: 98  XXXSEGNCSGGNCEPGDVFLVGTGPGDPELLTLKAVRVMESADLLLYDRLVSNDVLDLVS 157
              SEG CS G C  GDVFLVGTGPGDPELLTLKAVRV++SADLLLYDRLVSNDVLDLV 
Sbjct: 95  KRESEGKCSDGKCVSGDVFLVGTGPGDPELLTLKAVRVIKSADLLLYDRLVSNDVLDLVG 154

Query: 158 PNAKLLYVGKTAGYHSRTQVKMLAIFLAFS 187
           P+AKLLYVGKTAGYHSRTQ ++  + L+F+
Sbjct: 155 PDAKLLYVGKTAGYHSRTQEEIHELLLSFA 184


>Medtr3g026780.1 | uroporphyrinogen-III C-methyltransferase | HC |
           chr3:8248347-8245737 | 20130731
          Length = 234

 Score =  138 bits (347), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 67/87 (77%), Positives = 76/87 (87%)

Query: 101 SEGNCSGGNCEPGDVFLVGTGPGDPELLTLKAVRVMESADLLLYDRLVSNDVLDLVSPNA 160
           SEG CS G C  GDVFLVGTGPGDPELLT+KAVRV++SADLLLYDRLVSNDVLDLV  +A
Sbjct: 21  SEGKCSEGECVKGDVFLVGTGPGDPELLTVKAVRVIKSADLLLYDRLVSNDVLDLVGDHA 80

Query: 161 KLLYVGKTAGYHSRTQVKMLAIFLAFS 187
           KLLYVGKTAGYHSRTQ ++  + L+F+
Sbjct: 81  KLLYVGKTAGYHSRTQEEIHELLLSFA 107