Miyakogusa Predicted Gene

Lj3g3v0883720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0883720.1 Non Characterized Hit- tr|H3HQ15|H3HQ15_STRPU
Uncharacterized protein OS=Strongylocentrotus
purpurat,37.74,0.000000000000008,Thioredoxin-like,Thioredoxin-like
fold; coiled-coil,NULL; DUF953,Protein of unknown function
DUF953,,CUFF.41593.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g027090.1 | thioredoxin-like protein | HC | chr3:8382516-8...   238   8e-64

>Medtr3g027090.1 | thioredoxin-like protein | HC |
           chr3:8382516-8384675 | 20130731
          Length = 132

 Score =  238 bits (608), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 112/132 (84%), Positives = 123/132 (93%)

Query: 1   MPLKLFDATVSTFDGVFDKFRSEASQNKANLILFLADKDPATSLSWCPDCVRAEPVIYKK 60
           M LK+F +TVS FD VF+KFRSE  Q+KANLILFLAD DP+TSLSWCPDCVRAEPVIYKK
Sbjct: 1   MTLKVFTSTVSNFDSVFEKFRSEIPQHKANLILFLADNDPSTSLSWCPDCVRAEPVIYKK 60

Query: 61  LEASPDDIALIRAYVGDRPTWRNPHHPWRVDPKFKLTGVPTLIRWENDEVKGRLEDYEAH 120
           LEASP++IAL++AYVGDRPTWRNPHHPWRVDPKFKLTGVPTLIRWEND VKGRLED+EAH
Sbjct: 61  LEASPNEIALLKAYVGDRPTWRNPHHPWRVDPKFKLTGVPTLIRWENDAVKGRLEDHEAH 120

Query: 121 LENKIEALVADK 132
           +E KIEALVADK
Sbjct: 121 IEKKIEALVADK 132