Miyakogusa Predicted Gene

Lj3g3v0850590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0850590.1 Non Characterized Hit- tr|I1MJM7|I1MJM7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.34332
PE,68.17,0,seg,NULL; ZF_RING_2,Zinc finger, RING-type; ZF_C3H1,Zinc
finger, CCCH-type; ZF_RING_1,Zinc finger, R,CUFF.41580.1
         (452 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g028170.1 | makorin RING-zinc-finger protein | HC | chr3:8...   519   e-147
Medtr3g028190.1 | makorin RING-zinc-finger protein | HC | chr3:8...   318   5e-87

>Medtr3g028170.1 | makorin RING-zinc-finger protein | HC |
           chr3:8918386-8925048 | 20130731
          Length = 481

 Score =  519 bits (1337), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 273/473 (57%), Positives = 321/473 (67%), Gaps = 53/473 (11%)

Query: 1   MFNRGICKFYARGRCLKGEQCDYSHQRNDTPVDICAYYQKGSCTYGSQCRFKHVKXXXXX 60
           M NR +CKFYARG CLKG+QCD+SHQR DT  DIC+YYQKGSC YGS+CR+KHV+     
Sbjct: 1   MSNR-VCKFYARGVCLKGDQCDFSHQRKDTASDICSYYQKGSCAYGSRCRYKHVRASQAS 59

Query: 61  XXXXXXXXLVSDSAAAHTTRGTSSSVRKAANLSSYDKRA-QSLQHKHQESLGHGDVGESS 119
                     S    A + +  S+ V K   + S DKR  + LQ KHQ+S    DVGESS
Sbjct: 60  SSASMVS--DSAVPVARSAKVASNWVPKVTKVPSPDKRGVKGLQRKHQDST---DVGESS 114

Query: 120 TRTATATPSVHIFCPFAAADCPSRDKCPLIHGNQCSYCEKYCLHPTDREGKKNHLRTCEK 179
           T   +A P  ++FC FAAA+CP    C  IHGNQC YC KYCLHPTD++ K+NHLRTC+K
Sbjct: 115 T--GSARPHENLFCKFAAANCPG--GCSRIHGNQCLYCRKYCLHPTDKKEKENHLRTCDK 170

Query: 180 KEKYLQDL--SKEVECNVCLERVLSKPKQSECKFGLLPECDHAFCLSCIRNWRNSASASG 237
           KEKYL  L  S+E+ECNVCLERVLSKPK SECKFGLLPECDHAFCLSCIRNWR+SA  S 
Sbjct: 171 KEKYLLALKNSEEIECNVCLERVLSKPKPSECKFGLLPECDHAFCLSCIRNWRSSAPTSA 230

Query: 238 MDINNNANTVRTCPVCRKLSYFVIPSAIWFSTKEEKQEIIDNYKGKCKSVDCKHFNFGNG 297
           M+I +N NTVRTCPVCRKLSYFVIPS IWF+TKEEKQEIIDNYK  C+ +DCKHF+ GNG
Sbjct: 231 MEIGSNTNTVRTCPVCRKLSYFVIPSGIWFTTKEEKQEIIDNYKANCRLIDCKHFDSGNG 290

Query: 298 NCPFGARCFYKHTVKQGSYTDIXXXXXXXXXXNNYDMYDVLDMLNEVDLQPEEYYSIMRD 357
           NCPFGA CFYKHTVK GSYT            N++DM+D+LD+L EVDL   E+YSIMRD
Sbjct: 291 NCPFGASCFYKHTVKPGSYTWRHRRPPPQRRQNHFDMHDMLDVLGEVDLSSGEFYSIMRD 350

Query: 358 SEFFDEMDACEMMALSQSM--------------------------------------GLY 379
           S+FF+ MD  EMMALS S+                                         
Sbjct: 351 SDFFEGMDPFEMMALSDSLAGGSGPCLGPFDSDDDDDDGFRVSRMAAMQEAMAIGMDAFG 410

Query: 380 NSDEEDEYNFFQMAAFSEAMASGVDDFGHEDFENEEFNPMEAALFSMMMHSNM 432
             D+E+E+N F+MAA  EAM SG+DDFG +DF     +PM+AAL SMMMHS+M
Sbjct: 411 PDDDEEEFNVFRMAAMQEAMVSGIDDFGPDDFPG--IDPMDAALISMMMHSHM 461


>Medtr3g028190.1 | makorin RING-zinc-finger protein | HC |
           chr3:8931474-8934895 | 20130731
          Length = 357

 Score =  318 bits (816), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 165/334 (49%), Positives = 210/334 (62%), Gaps = 22/334 (6%)

Query: 1   MFNRGICKFYARGRCLKGEQCDYSHQRNDTPVDICAYYQKGSCTYGSQCRFKHVKXXXXX 60
           M  R +CKF+A G CLKGE C++SH     P +IC +YQKG C YGS+CR+ HVK     
Sbjct: 1   MSKRVLCKFFAHGACLKGEHCEFSHDWKAPPNNICTFYQKGVCAYGSRCRYDHVKASRAQ 60

Query: 61  XXXXXXXX-----LVSDSAAAHTTRGTSSSVRKAANLSSYDKR--AQSLQHKHQES---- 109
                        LVS+SA    TR TS+ V  AA  S +       S Q  +QES    
Sbjct: 61  SSTPSSSITEHQPLVSESAVLGNTRVTSNGVATAAEFSLFSTPFVLPSEQAWNQESAQLD 120

Query: 110 -LGHGDVGESSTRTATATPSVHIFCPFAAA-DCPSRDKCPLIHGNQCSYCEKYCLHPTDR 167
            L   DV +S       +PS    C FAAA +CP  ++CP +HG+ C  C + CLHP   
Sbjct: 121 FLREDDVVQS----VITSPSELPICSFAAAGNCPRGEQCPHVHGDLCPSCGRQCLHPFRP 176

Query: 168 EGKKNHLRTCEKKEKYLQDL--SKEVECNVCLERVLSKPKQSECKFGLLPECDHAFCLSC 225
           E ++ H+ +C  K+K+L+ L  S+E+EC+VCLERVLSKP  +E KFGLL ECDH FC+SC
Sbjct: 177 EEREEHMMSCRNKQKHLEALKRSQEIECSVCLERVLSKPTAAERKFGLLSECDHPFCVSC 236

Query: 226 IRNWRNSASASGMDINNNANTVRTCPVCRKLSYFVIPSAIWFSTKEEKQEIIDNYKGKCK 285
           IRNWR+S    GMD+N+   T+R CP+CRKLSYFV+PS IW++T EEK EIID YK K K
Sbjct: 237 IRNWRSSNPTLGMDVNS---TLRACPICRKLSYFVVPSVIWYATSEEKMEIIDTYKAKLK 293

Query: 286 SVDCKHFNFGNGNCPFGARCFYKHTVKQGSYTDI 319
           S+DCKHF+FG GNCPFG  CFYKH  + G   ++
Sbjct: 294 SIDCKHFDFGEGNCPFGTSCFYKHAYRDGRLEEV 327