Miyakogusa Predicted Gene

Lj3g3v0839390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0839390.1 Non Characterized Hit- tr|B9T0Y0|B9T0Y0_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,65.62,4e-18,seg,NULL,CUFF.41576.1
         (359 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g033530.1 | hypothetical protein | HC | chr3:10750798-1074...   530   e-151
Medtr6g087880.1 | late embryogenesis abundant protein | HC | chr...    79   7e-15
Medtr2g101870.1 | late embryogenesis abundant protein | HC | chr...    73   3e-13
Medtr8g106580.1 | late embryogenesis abundant protein | HC | chr...    73   5e-13
Medtr6g081930.1 | late embryogenesis abundant protein | HC | chr...    71   1e-12
Medtr3g037650.1 | late embryogenesis abundant protein | LC | chr...    61   2e-09
Medtr0154s0010.1 | late embryogenesis abundant protein | HC | sc...    57   2e-08
Medtr4g075730.1 | late embryogenesis abundant protein | HC | chr...    55   7e-08

>Medtr3g033530.1 | hypothetical protein | HC |
           chr3:10750798-10747558 | 20130731
          Length = 350

 Score =  530 bits (1366), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 260/359 (72%), Positives = 287/359 (79%), Gaps = 9/359 (2%)

Query: 1   MPNHNAMHHNNTTVEDHHDALIYQTYPCGYYVQSPSTLSHANSAATDIRSNIQNDAGSTF 60
           M  HN MHHNN  VEDH + L YQTYPCGYYVQSPST+SHANS   D  SNIQND  STF
Sbjct: 1   MSYHNGMHHNNNVVEDH-ETLTYQTYPCGYYVQSPSTVSHANS--IDKHSNIQNDTESTF 57

Query: 61  HSPVRSETHPLNPAHEDDPSRFALCRYXXXXXXXXXFLHHKKISYDGTDATENGDINRPV 120
           HSP RSET P+NP HE +P+RFALCRY         FLHHKK+SYDGT ATENGD +  +
Sbjct: 58  HSPNRSETLPINPVHEQEPNRFALCRYSSSRGSNNSFLHHKKVSYDGT-ATENGDDHHLM 116

Query: 121 IVDGCGGXXXXXXXXXXXXKLFFDYYYGNGKGGWKRYFSYSYADSCGWICLQMSWRLMVS 180
           IV+  G             K  FD YY    GGWKRYFSY  +DSC WI LQ++WR+MVS
Sbjct: 117 IVNDSGSVVSDEEE-----KGLFDEYYYEKNGGWKRYFSYHNSDSCAWIWLQVTWRVMVS 171

Query: 181 FGIALLVFYIATKPPPPNFSLEISKIPEFKLGEGVDRTGVTTKILTCNCSMNLIIENKSR 240
           FG ALLVFYIATKPP P  S EI++IPEFKLGEGVDRTGVTTKILTCNCSMNLI+ENKSR
Sbjct: 172 FGFALLVFYIATKPPTPKISFEIARIPEFKLGEGVDRTGVTTKILTCNCSMNLIVENKSR 231

Query: 241 FFGLHIRPPLMDMKFSVLPFASSNGPKLYAESGLTIFTLQLGVKNKPMYGAGRSMQDMLD 300
           FFGLHIRPP MDMKFS+LPFA SNGP+LYAESGLT+F LQL VKNKPMYGAGRSM+DMLD
Sbjct: 232 FFGLHIRPPKMDMKFSILPFAFSNGPELYAESGLTVFPLQLEVKNKPMYGAGRSMEDMLD 291

Query: 301 SGKGLPIAIRVILSSSFEVVPNLIKPRFHHRVECIVVLKKDYDRKHRTQAFNSTCKVTS 359
           SG+GLPI I+V LSSSFEVVP L+KP+FHHRVECIVVLKK Y++KH +QAFNSTCKVTS
Sbjct: 292 SGRGLPILIQVTLSSSFEVVPALVKPKFHHRVECIVVLKKTYNKKHHSQAFNSTCKVTS 350


>Medtr6g087880.1 | late embryogenesis abundant protein | HC |
           chr6:33066104-33069639 | 20130731
          Length = 307

 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 86/164 (52%), Gaps = 4/164 (2%)

Query: 177 LMVSFGIALLVFYIATKPPPPNFSLEISKIPEFKLGEGVDRTGVTTKILTCNCSMNLIIE 236
            ++ F +   + + A+    P  S++   +  F  GEG D TGV TK+LT NCSM +++ 
Sbjct: 127 FVLVFSLFCFIIWAASLHYKPQLSVKSLTVHNFYFGEGSDVTGVPTKMLTVNCSMRMLVH 186

Query: 237 NKSRFFGLHIRPPLMDMKFSVLPFASSNGPKLYAESGLTIFTLQLGVKNK--PMYGAGRS 294
           N + FFG+++    +++ +S L  A+    K Y +   +  T+ + ++    P+YGAG  
Sbjct: 187 NPATFFGIYVSSKSVNLMYSDLTVATGELKK-YHQQRKSRRTVSVNIQGSKVPLYGAGAD 245

Query: 295 MQDMLDSGKGLPIAIRVILSSSFEVVPNLIKPRFHHRVECIVVL 338
           +   +D+GK + + +   + S   VV  L++ +   RV C + +
Sbjct: 246 VASSVDNGK-ISLTLVFEVKSRGNVVGKLVRTKHTQRVSCSIAV 288


>Medtr2g101870.1 | late embryogenesis abundant protein | HC |
           chr2:43826956-43829452 | 20130731
          Length = 309

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 93/189 (49%), Gaps = 3/189 (1%)

Query: 151 KGGWKRYFSYSYADSCGWICLQMSWRLMVSFGIALLVFYIATKPPPPNFSLEISKIPEFK 210
           +G ++ +   S+A    +  L   +  +V F +  L+ + A++P     +++   +    
Sbjct: 105 EGSYREFEDMSFARR--FQALIAVFTFLVVFTVFCLIIWGASRPFKAEVTVKSLAVHNLY 162

Query: 211 LGEGVDRTGVTTKILTCNCSMNLIIENKSRFFGLHIRPPLMDMKFSVLPFASSNGPKLYA 270
           + EG D TGV TKILT N ++++ I N + FFG+H+    +++ +S +  A+    K Y 
Sbjct: 163 VWEGTDHTGVPTKILTINSTLHMNIYNPATFFGIHVHTSPINLVYSDISIATGELKKHYQ 222

Query: 271 -ESGLTIFTLQLGVKNKPMYGAGRSMQDMLDSGKGLPIAIRVILSSSFEVVPNLIKPRFH 329
                 I ++ L     P+YGAG ++         + + ++  + S  +VV  L++ R H
Sbjct: 223 PRKSHRIVSVNLEGNKIPLYGAGSTITVSQTGSVEVALVLKFEIRSRGDVVGKLVRTRHH 282

Query: 330 HRVECIVVL 338
             + C +V+
Sbjct: 283 KEITCPLVI 291


>Medtr8g106580.1 | late embryogenesis abundant protein | HC |
           chr8:44974833-44973007 | 20130731
          Length = 296

 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 12/155 (7%)

Query: 191 ATKPPPPNFSLEISKIPEFKLGEGVDRTGVTTKILTCNCSMNLIIENKSRFFGLHIRPPL 250
           A++P  P+  ++  K    ++  G D TGV T ++T N ++     NK  FFG+H+    
Sbjct: 129 ASRPMKPHVMIKSIKFEHVRVQAGSDATGVATDMITVNATVKFTYRNKGTFFGVHVSSTP 188

Query: 251 MDMKFSVLPFASSNGPKLY-AESGLTIFTLQLGVKNKPMYGAGRSMQDMLDSGKGLPIAI 309
           +D+ +S +   + N  K Y +     + ++ +     P+YG+G S    L S  G+P  +
Sbjct: 189 LDLSYSEIVIGTGNMKKFYQSRRSQRLVSVAVMGSKIPLYGSGAS----LSSTTGMP-TL 243

Query: 310 RVILSSSFE------VVPNLIKPRFHHRVECIVVL 338
            V L  SFE      V+  L+KP+++ +V C VV 
Sbjct: 244 PVPLKLSFEIRSRAYVLGKLVKPKYYKKVHCSVVF 278


>Medtr6g081930.1 | late embryogenesis abundant protein | HC |
           chr6:30580513-30584032 | 20130731
          Length = 294

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 89/183 (48%), Gaps = 12/183 (6%)

Query: 162 YADSCGWICLQMSWRLMVSFGIALLVFYIATKPPPPNFSLEISKIPEFKLGEGVDRTGVT 221
           Y+  C ++   + +   V F +  L+ + A++P  P   ++  K     +  G D TGV 
Sbjct: 100 YSRRCYFLAFVVGF--FVLFSLFSLILWGASRPMKPKIVIKSIKFDHVTVQAGSDSTGVA 157

Query: 222 TKILTCNCSMNLIIENKSRFFGLHIRPPLMDMKFSVLPFASSNGPKLY-AESGLTIFTLQ 280
           T ++T N ++     N   FFG+H+    +++ +S +  AS N  + + +     + ++ 
Sbjct: 158 TDMITMNSTLKFTYRNTGTFFGVHVSATPLELSYSDIVIASGNMKEFHQSRRSHRLVSVA 217

Query: 281 LGVKNKPMYGAGRSMQDMLDSGKGL-----PIAIRVILSSSFEVVPNLIKPRFHHRVECI 335
           +     P+YG+G S    L S  G+     P+ +  ++ S   V+ NL+K +++ R++C 
Sbjct: 218 VMGSKVPLYGSGAS----LSSTTGMPTLPVPLNLNFVMRSRANVLGNLVKHKYYKRIQCS 273

Query: 336 VVL 338
           + L
Sbjct: 274 ITL 276


>Medtr3g037650.1 | late embryogenesis abundant protein | LC |
           chr3:13829626-13832376 | 20130731
          Length = 273

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 11/177 (6%)

Query: 183 IALLVFYIATKPPPPNFSLEISKIPEFKLGEGVDRTGVTTKILTCNCSMNLIIENKSRFF 242
           I LLV +  ++  P  F LE      + + EG+D  G  T ++T N S+ L   N + F 
Sbjct: 102 IPLLVIWAVSRQKPDLF-LESITFDRYSIEEGIDHYGFNTSMVTTNSSLKLTFTNTATFS 160

Query: 243 GLHIRPPLMDMK-FSVLPFASSNGPKLYA--ESGLTIFTLQLGVKNKPMYGAGRSMQDML 299
           G+H+    ++MK ++ LP A+ N P  Y   +S  +I  +++     P++ A     D  
Sbjct: 161 GIHVTSIPLEMKNYNQLPIATGNIPNFYQRRKSARSI-DVKVEGSQIPVHIA----PDDY 215

Query: 300 DSGKGLPIAIRVILSSSFEVVPNLIKPRFHHRVECIVVLKKDYDRKHRTQAFNSTCK 356
             G+ +P+ + +I++S   V+  L+  +F+  +EC   L  D  +        +TCK
Sbjct: 216 VLGESIPLTLNMIVNSKANVLWILVTHKFNMNIEC--SLYMDTKKMGVPIPLTNTCK 270


>Medtr0154s0010.1 | late embryogenesis abundant protein | HC |
           scaffold0154:1-1407 | 20130731
          Length = 136

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 68/118 (57%), Gaps = 4/118 (3%)

Query: 224 ILTCNCSMNLIIENKSRFFGLHIRPPLMDMKFSVLPFASSNGPKLYAESGLTIFTLQLGV 283
           +++ N ++ +   N + FFG+H+    +D+ +  L  A+ N PK Y +S  +  ++++ V
Sbjct: 1   MVSMNSTVKMTFRNTATFFGVHVASTPLDLNYYQLTLATGNMPKFY-QSRKSQRSIKVMV 59

Query: 284 KNK--PMYGAGRSMQDMLDSG-KGLPIAIRVILSSSFEVVPNLIKPRFHHRVECIVVL 338
           K    P+YG G  +  +  S  + +P+ + +++ S   V+  L+KP+F+ ++EC +++
Sbjct: 60  KGSHIPLYGGGARLNTVNGSPVEPVPLTLNIMVRSKAYVLGALVKPKFNKKIECALIM 117


>Medtr4g075730.1 | late embryogenesis abundant protein | HC |
           chr4:28960090-28965957 | 20130731
          Length = 318

 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 12/161 (7%)

Query: 186 LVFYIATKPPPPNFSLEISKIPEFKLGEGVDRTGVTTKILTCNCSMNLIIENKSRFFGLH 245
           L+ + A+K   P   L+        +  G D TGV T +L+ N ++ ++  N + FFG+H
Sbjct: 144 LILWGASKSYKPRVILKSIVFENLNVQSGNDGTGVPTDMLSLNSTVRILYRNPATFFGVH 203

Query: 246 IRPPLMDMKFSVLPFASSNGPKLY----AESGLTIFTLQLGVKNKPMYGA----GRSMQD 297
           +    M + +  L  AS    + Y    ++  L +      V   P+YG     G S  +
Sbjct: 204 VTSTPMQLSYYQLRLASGQIQEFYQSRKSQRKLAVVVHGYQV---PLYGGVSVLGNSNTE 260

Query: 298 MLDSGKGLPIAIRVILSSSFEVVPNLIKPRFHHRVECIVVL 338
            +++   LP+ +   + S   ++  L+K  F+HR+ C +  
Sbjct: 261 HINT-VALPMNLTFEVRSRAYILGRLVKSTFYHRIRCSITF 300