Miyakogusa Predicted Gene

Lj3g3v0838340.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0838340.1 Non Characterized Hit- tr|I1PEL9|I1PEL9_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,51.35,4e-19,Ankyrin repeat,Ankyrin repeat-containing domain;
seg,NULL; ANK_REPEAT,Ankyrin repeat; ANK_REP_REGION,CUFF.41570.1
         (156 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g029590.1 | ARM repeat CCCH-type zinc finger protein | HC ...   223   8e-59
Medtr3g435590.1 | ARM repeat CCCH-type zinc finger protein | HC ...   196   8e-51
Medtr7g092070.1 | ARM repeat CCCH-type zinc finger protein | HC ...   173   7e-44
Medtr0728s0020.1 | ARM repeat CCCH-type zinc finger protein | HC...   165   1e-41
Medtr1g050438.1 | ARM repeat CCCH-type zinc finger protein | HC ...   161   3e-40
Medtr5g082830.1 | ARM repeat CCCH-type zinc finger protein | HC ...   120   3e-28
Medtr3g070880.1 | ARM repeat CCCH-type zinc finger protein | HC ...   111   3e-25
Medtr1g075890.1 | zinc finger CCCH domain protein, putative | HC...   108   1e-24
Medtr2g105770.1 | zinc finger CCCH domain protein, putative | LC...    96   1e-20
Medtr5g071070.1 | ARM repeat CCCH-type zinc finger protein | HC ...    92   2e-19
Medtr3g464280.1 | zinc finger CCCH domain protein | HC | chr3:25...    88   4e-18
Medtr3g464260.1 | CCCH-type zinc finger protein, putative | HC |...    86   2e-17
Medtr5g071070.2 | ARM repeat CCCH-type zinc finger protein | HC ...    60   9e-10

>Medtr3g029590.1 | ARM repeat CCCH-type zinc finger protein | HC |
           chr3:9317344-9312889 | 20130731
          Length = 731

 Score =  223 bits (567), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 110/134 (82%), Positives = 118/134 (88%)

Query: 23  VKDMKNLTVHTEDSFSTLHELASNNDFESFKLALDRDASLINEVGPWYVRQSGSKQIVLE 82
           V+DMKNLTV T+DSFS+L E ASNNDFE FK+ALD DASLINEVG WYVRQ GS QIVLE
Sbjct: 28  VEDMKNLTVRTDDSFSSLLEHASNNDFEDFKVALDSDASLINEVGFWYVRQKGSNQIVLE 87

Query: 83  HRTPLMVASCYGSIDVLKLILTCSEADVNFSCGNDKSTALHCAASGGSVNAVDVMKLLLS 142
           HRTPLMVA+ YGSID+LKLIL+  EADVNFSCG DKSTALHCAAS GSVNAVD +KLLLS
Sbjct: 88  HRTPLMVAASYGSIDILKLILSYPEADVNFSCGTDKSTALHCAASSGSVNAVDAIKLLLS 147

Query: 143 AGADINCVDANGNR 156
           AGADIN VDANG R
Sbjct: 148 AGADINSVDANGKR 161


>Medtr3g435590.1 | ARM repeat CCCH-type zinc finger protein | HC |
           chr3:11689204-11687795 | 20130731
          Length = 469

 Score =  196 bits (498), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 100/134 (74%), Positives = 112/134 (83%)

Query: 23  VKDMKNLTVHTEDSFSTLHELASNNDFESFKLALDRDASLINEVGPWYVRQSGSKQIVLE 82
           V+DMKNLTV T DS S+L E AS NDFE FK+ALD DASL+ EVG W VRQ+G  QIVLE
Sbjct: 15  VEDMKNLTVTTNDSLSSLLEHASKNDFEQFKIALDSDASLLLEVGAWCVRQNGHNQIVLE 74

Query: 83  HRTPLMVASCYGSIDVLKLILTCSEADVNFSCGNDKSTALHCAASGGSVNAVDVMKLLLS 142
            RT LMVA+  GSID+LKLIL+CSEA VNF+CG DK+TALHCAAS G+VNAVD +KLLLS
Sbjct: 75  DRTALMVAASCGSIDILKLILSCSEAGVNFTCGTDKTTALHCAASSGTVNAVDAVKLLLS 134

Query: 143 AGADINCVDANGNR 156
           AGADI CVDANGNR
Sbjct: 135 AGADIYCVDANGNR 148


>Medtr7g092070.1 | ARM repeat CCCH-type zinc finger protein | HC |
           chr7:36454363-36458250 | 20130731
          Length = 734

 Score =  173 bits (438), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 84/131 (64%), Positives = 104/131 (79%)

Query: 26  MKNLTVHTEDSFSTLHELASNNDFESFKLALDRDASLINEVGPWYVRQSGSKQIVLEHRT 85
           M +LT+ TEDSF++L ELA+NND E FK  ++ D   ++EVG WY R+ GSKQ+V E RT
Sbjct: 33  MNHLTISTEDSFASLLELAANNDVEGFKRLIEYDPMSVDEVGLWYGRRKGSKQMVNEQRT 92

Query: 86  PLMVASCYGSIDVLKLILTCSEADVNFSCGNDKSTALHCAASGGSVNAVDVMKLLLSAGA 145
           PLMVA+ YGSIDV+KLI + S+ D+N  CG DKSTALHCAASGG+ NAVD +KLLL+AGA
Sbjct: 93  PLMVAATYGSIDVMKLIFSLSDVDINRPCGLDKSTALHCAASGGAENAVDAVKLLLAAGA 152

Query: 146 DINCVDANGNR 156
           D N VDANG+R
Sbjct: 153 DPNSVDANGDR 163


>Medtr0728s0020.1 | ARM repeat CCCH-type zinc finger protein | HC |
           scaffold0728:3845-5830 | 20130731
          Length = 626

 Score =  165 bits (418), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 81/134 (60%), Positives = 108/134 (80%), Gaps = 1/134 (0%)

Query: 24  KDMKNLTVHTEDSFSTLHELASNNDFESFKLALDRD-ASLINEVGPWYVRQSGSKQIVLE 82
           KDM+ L V+ +DSF +L  LAS+ND E FKL L+++ A+ INE G WY RQ+GS +IVLE
Sbjct: 15  KDMETLAVNIKDSFPSLLVLASHNDSEGFKLLLEKEGAASINEAGIWYGRQTGSTEIVLE 74

Query: 83  HRTPLMVASCYGSIDVLKLILTCSEADVNFSCGNDKSTALHCAASGGSVNAVDVMKLLLS 142
           H+TPLMVA+ YGSIDV+K+IL   + DVNF+C  +KSTALH AASGGS N VD +++L+S
Sbjct: 75  HKTPLMVAATYGSIDVMKVILLYPDVDVNFTCVANKSTALHYAASGGSANVVDAVRILIS 134

Query: 143 AGADINCVDANGNR 156
           AGA+++CV++NGNR
Sbjct: 135 AGANVSCVNSNGNR 148


>Medtr1g050438.1 | ARM repeat CCCH-type zinc finger protein | HC |
           chr1:19408327-19410099 | 20130731
          Length = 590

 Score =  161 bits (407), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 79/132 (59%), Positives = 106/132 (80%), Gaps = 1/132 (0%)

Query: 26  MKNLTVHTEDSFSTLHELASNNDFESFKLALDRD-ASLINEVGPWYVRQSGSKQIVLEHR 84
           M+ L V+ +DSF +L  LAS+ND E FKL L+++ A+ INE G WY RQ+GS +IVLEH+
Sbjct: 1   METLAVNIKDSFPSLLVLASHNDSEGFKLLLEKEGAASINEAGIWYGRQTGSTEIVLEHK 60

Query: 85  TPLMVASCYGSIDVLKLILTCSEADVNFSCGNDKSTALHCAASGGSVNAVDVMKLLLSAG 144
           TPLMVA+ YGSIDV+K+IL   + DVNF+C  +KSTALH AASGGS N VD +++L+SAG
Sbjct: 61  TPLMVAATYGSIDVMKVILLYPDVDVNFTCVANKSTALHYAASGGSANVVDAVRILISAG 120

Query: 145 ADINCVDANGNR 156
           A+++CV++NGNR
Sbjct: 121 ANVSCVNSNGNR 132


>Medtr5g082830.1 | ARM repeat CCCH-type zinc finger protein | HC |
           chr5:35642238-35645468 | 20130731
          Length = 683

 Score =  120 bits (302), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 93/134 (69%), Gaps = 3/134 (2%)

Query: 23  VKDMKNLTVHTEDSFSTLHELASNNDFESFKLALDRDASLINEVGPWYVRQSGSKQIVLE 82
           ++D   + +H     S L EL++++DF++FK  +D     +NE G WY R+ GSK++  E
Sbjct: 16  MEDKLQMGIHNS---SILLELSASDDFDAFKREVDEKDLDVNEEGFWYGRRIGSKKMESE 72

Query: 83  HRTPLMVASCYGSIDVLKLILTCSEADVNFSCGNDKSTALHCAASGGSVNAVDVMKLLLS 142
            RTPLM+AS +GS  V++ I++  + DVN  CG+D +TALHCA +GGS   ++V+KLLL 
Sbjct: 73  KRTPLMIASMFGSTRVVEYIVSAGKVDVNGVCGSDMATALHCAVAGGSEFLLEVVKLLLD 132

Query: 143 AGADINCVDANGNR 156
           AGAD +C+DA+GN+
Sbjct: 133 AGADADCLDASGNK 146


>Medtr3g070880.1 | ARM repeat CCCH-type zinc finger protein | HC |
           chr3:31810070-31811872 | 20130731
          Length = 517

 Score =  111 bits (277), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 80/114 (70%)

Query: 38  STLHELASNNDFESFKLALDRDASLINEVGPWYVRQSGSKQIVLEHRTPLMVASCYGSID 97
           STL EL++ +D E+FK  ++     +NE G WY R+ GSK++  E RTPLM+AS +GSI 
Sbjct: 8   STLLELSAIDDIEAFKREVEEKGYDVNEAGFWYCRKIGSKKMCYEKRTPLMIASLFGSIR 67

Query: 98  VLKLILTCSEADVNFSCGNDKSTALHCAASGGSVNAVDVMKLLLSAGADINCVD 151
           V+K I+  +  +VN + G++  TALHCA +GGS +  +++KLLL AGAD++ +D
Sbjct: 68  VVKYIIETNMVNVNMAIGSENVTALHCAVAGGSKSKFEIVKLLLDAGADVDFLD 121


>Medtr1g075890.1 | zinc finger CCCH domain protein, putative | HC |
           chr1:33647135-33649096 | 20130731
          Length = 653

 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 78/119 (65%)

Query: 38  STLHELASNNDFESFKLALDRDASLINEVGPWYVRQSGSKQIVLEHRTPLMVASCYGSID 97
           S L E ++ +D  +F  A+++D   ++EVG WY R+ GSK++  E RTPLMVA+ YGS  
Sbjct: 31  SALLEFSAKDDVMAFTDAVEKDDHNVDEVGLWYGRKVGSKEMGYEERTPLMVAALYGSKG 90

Query: 98  VLKLILTCSEADVNFSCGNDKSTALHCAASGGSVNAVDVMKLLLSAGADINCVDANGNR 156
           VL  IL     DVN  CG+D++TAL CA SG S  + +V+KLLL A AD++  DA  NR
Sbjct: 91  VLSYILGTGRVDVNRVCGSDRATALRCAVSGCSAASAEVVKLLLDASADVSSADAYRNR 149


>Medtr2g105770.1 | zinc finger CCCH domain protein, putative | LC |
           chr2:45634593-45635713 | 20130731
          Length = 131

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 1/98 (1%)

Query: 35  DSFSTLHELASNNDFESFKLALDRD-ASLINEVGPWYVRQSGSKQIVLEHRTPLMVASCY 93
           +SFS+L ELASNND + FKL LD++ AS INE   +Y         + EH+T LMV   Y
Sbjct: 32  NSFSSLLELASNNDIKGFKLLLDKEGASSINEARIFYTIGKMGLSKLFEHKTSLMVDVTY 91

Query: 94  GSIDVLKLILTCSEADVNFSCGNDKSTALHCAASGGSV 131
           GSIDV+KLIL C EA+VNF+   +KSTAL+C   GG V
Sbjct: 92  GSIDVIKLILLCPEANVNFAFPMNKSTALNCVVYGGFV 129


>Medtr5g071070.1 | ARM repeat CCCH-type zinc finger protein | HC |
           chr5:30120798-30124106 | 20130731
          Length = 704

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 75/119 (63%)

Query: 38  STLHELASNNDFESFKLALDRDASLINEVGPWYVRQSGSKQIVLEHRTPLMVASCYGSID 97
           S L E ++ +D   FK A++ +   ++ VG WY R  GS +   E RTPLMVA+ YGS+D
Sbjct: 33  SYLLEFSAADDVIGFKNAIENEGCDVDGVGLWYGRNVGSNKFGYEERTPLMVAAMYGSLD 92

Query: 98  VLKLILTCSEADVNFSCGNDKSTALHCAASGGSVNAVDVMKLLLSAGADINCVDANGNR 156
           V   IL     DVN S G+D +TALHCA  GGS  +  ++K+LL A AD + VDANG+R
Sbjct: 93  VSAYILGTGRVDVNRSSGSDGATALHCAVVGGSAASPKIIKILLDASADASAVDANGSR 151


>Medtr3g464280.1 | zinc finger CCCH domain protein | HC |
           chr3:25817675-25819322 | 20130731
          Length = 497

 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 65/100 (65%)

Query: 56  LDRDASLINEVGPWYVRQSGSKQIVLEHRTPLMVASCYGSIDVLKLILTCSEADVNFSCG 115
           L+  A  ++EVG WY R+ GSK++  E RTPLM+A+ +GS  VL  IL     +V+  CG
Sbjct: 33  LEFSAKDVDEVGLWYGRKIGSKEMSYEERTPLMIAALFGSKGVLSYILGTGRVNVSRPCG 92

Query: 116 NDKSTALHCAASGGSVNAVDVMKLLLSAGADINCVDANGN 155
           +D+ TALH + +G S  + +++KLL+ A AD + VD N N
Sbjct: 93  SDRGTALHFSVTGCSAASAEIIKLLVDASADGSVVDENDN 132


>Medtr3g464260.1 | CCCH-type zinc finger protein, putative | HC |
           chr3:25811443-25813783 | 20130731
          Length = 529

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 65/104 (62%)

Query: 43  LASNNDFESFKLALDRDASLINEVGPWYVRQSGSKQIVLEHRTPLMVASCYGSIDVLKLI 102
           + + +D  +F  A+++    ++EVG WY R+ GSK +  E RT LMVA+ +GS  VL  I
Sbjct: 28  VTAKDDVLAFTDAVEKGEHEVDEVGLWYGRRVGSKDMGYEERTALMVAALFGSKGVLSYI 87

Query: 103 LTCSEADVNFSCGNDKSTALHCAASGGSVNAVDVMKLLLSAGAD 146
           L  S  DVN  CG+D++TAL CA SG S  + +V+ L L A AD
Sbjct: 88  LGTSRVDVNRVCGSDRATALRCAVSGCSAASAEVINLSLDASAD 131


>Medtr5g071070.2 | ARM repeat CCCH-type zinc finger protein | HC |
           chr5:30120798-30124106 | 20130731
          Length = 622

 Score = 60.1 bits (144), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/69 (53%), Positives = 47/69 (68%)

Query: 88  MVASCYGSIDVLKLILTCSEADVNFSCGNDKSTALHCAASGGSVNAVDVMKLLLSAGADI 147
           MVA+ YGS+DV   IL     DVN S G+D +TALHCA  GGS  +  ++K+LL A AD 
Sbjct: 1   MVAAMYGSLDVSAYILGTGRVDVNRSSGSDGATALHCAVVGGSAASPKIIKILLDASADA 60

Query: 148 NCVDANGNR 156
           + VDANG+R
Sbjct: 61  SAVDANGSR 69