Miyakogusa Predicted Gene

Lj3g3v0824590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0824590.1 Non Characterized Hit- tr|D8RU93|D8RU93_SELML
Putative uncharacterized protein OS=Selaginella
moelle,41.35,0.000000000000002,BIOGENESIS OF LYSOSOME-RELATED
ORGANELLES COMPLEX 1 SUBUNIT 2,NULL; PHYTOENE DEHYDROGENASE,NULL;
BLO,CUFF.41494.1
         (128 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g034300.2 | biogenesis of lysosome-related organelles comp...   228   1e-60
Medtr3g034300.1 | biogenesis of lysosome-related organelles comp...   228   1e-60

>Medtr3g034300.2 | biogenesis of lysosome-related organelles
           complex-1 protein | HC | chr3:11093595-11090293 |
           20130731
          Length = 127

 Score =  228 bits (580), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 112/123 (91%), Positives = 116/123 (94%)

Query: 1   MDNMKNDEAQDQKHDELAESLNDLFTSISTMIKSELQGTNNHLELLEKMNLRVAEEYKGF 60
           MDN+K DEAQDQK DELAESLNDLF+S++TMIKSELQGTNNHLELLEKMNLRVAEEY GF
Sbjct: 1   MDNIKKDEAQDQKRDELAESLNDLFSSVATMIKSELQGTNNHLELLEKMNLRVAEEYNGF 60

Query: 61  GDLASGLRVFVEQLKCKSGSFNEYVEQIDAIEKQVTEFEAVVSMLDKYVALLESRVLSVY 120
           GDLASGLRVFVEQLKCKSGSFNEYVEQIDAIEKQVTEFEAVVSMLDKYV LLESRV S Y
Sbjct: 61  GDLASGLRVFVEQLKCKSGSFNEYVEQIDAIEKQVTEFEAVVSMLDKYVTLLESRVQSQY 120

Query: 121 QHK 123
           Q K
Sbjct: 121 QTK 123


>Medtr3g034300.1 | biogenesis of lysosome-related organelles
           complex-1 protein | HC | chr3:11093995-11090293 |
           20130731
          Length = 127

 Score =  228 bits (580), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 112/123 (91%), Positives = 116/123 (94%)

Query: 1   MDNMKNDEAQDQKHDELAESLNDLFTSISTMIKSELQGTNNHLELLEKMNLRVAEEYKGF 60
           MDN+K DEAQDQK DELAESLNDLF+S++TMIKSELQGTNNHLELLEKMNLRVAEEY GF
Sbjct: 1   MDNIKKDEAQDQKRDELAESLNDLFSSVATMIKSELQGTNNHLELLEKMNLRVAEEYNGF 60

Query: 61  GDLASGLRVFVEQLKCKSGSFNEYVEQIDAIEKQVTEFEAVVSMLDKYVALLESRVLSVY 120
           GDLASGLRVFVEQLKCKSGSFNEYVEQIDAIEKQVTEFEAVVSMLDKYV LLESRV S Y
Sbjct: 61  GDLASGLRVFVEQLKCKSGSFNEYVEQIDAIEKQVTEFEAVVSMLDKYVTLLESRVQSQY 120

Query: 121 QHK 123
           Q K
Sbjct: 121 QTK 123