Miyakogusa Predicted Gene

Lj3g3v0821170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0821170.1 Non Characterized Hit- tr|A9PA47|A9PA47_POPTR
Putative uncharacterized protein OS=Populus trichocarp,47.17,2e-19,
,CUFF.41747.1
         (168 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g023110.1 | EARLY responsive TO dehydration protein, putat...   201   4e-52
Medtr7g090630.2 | dehydration-induced protein ERD15 | HC | chr7:...    93   9e-20
Medtr7g090630.1 | dehydration-induced protein ERD15 | HC | chr7:...    93   9e-20
Medtr7g090630.3 | dehydration-induced protein ERD15 | HC | chr7:...    92   3e-19
Medtr5g083690.1 | early response-like dehydration-protein | HC |...    74   6e-14

>Medtr3g023110.1 | EARLY responsive TO dehydration protein, putative
           | HC | chr3:6977413-6980864 | 20130731
          Length = 169

 Score =  201 bits (510), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 110/174 (63%), Positives = 127/174 (72%), Gaps = 11/174 (6%)

Query: 1   MALVSGRSSDLNPNAPLFIPAALREVEDFSPQWWELVESSTWFRDYWSSQHKEEDFGESG 60
           MALV+GRSS LNPNAPLFIPAA R+VEDFSPQWWELV+SSTWF +YW SQHKEEDF ESG
Sbjct: 1   MALVTGRSSALNPNAPLFIPAAFRQVEDFSPQWWELVKSSTWFHNYWLSQHKEEDFVESG 60

Query: 61  IN--STNDDVENMISETLDLGIDQEDLNFLEHEFEQLAMSHEDQEFPVRDIDPNDGKKPX 118
            N  + +DD+E+M+SET DLGI +ED NFL++EFE+L MS E QE PV D +P + KKP 
Sbjct: 61  GNDATNDDDIEHMLSETFDLGI-EEDFNFLDNEFEKLVMSDEAQECPVMD-EPVEEKKPV 118

Query: 119 XXXXXXXXXXXXXXEPKSPKERGLK----SPKHLEKPAQHVNIKSAPSRIHQPR 168
                            SPKERG K    SPK  EKPAQ+VN+K AP RIHQPR
Sbjct: 119 HGVNKDAAALIKIL---SPKERGSKSPIGSPKQFEKPAQYVNLKCAPQRIHQPR 169


>Medtr7g090630.2 | dehydration-induced protein ERD15 | HC |
           chr7:35671578-35672471 | 20130731
          Length = 115

 Score = 93.2 bits (230), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 68/104 (65%), Gaps = 3/104 (2%)

Query: 1   MALVSGRSSDLNPNAPLFIPAALREVEDFSPQWWELVESSTWFRDYW-SSQHKEEDFGES 59
           MALVSG  S LNPNAPL+IPAA R VEDFSP+WW+LV +  W+ DYW S QH +E F + 
Sbjct: 1   MALVSGGRSTLNPNAPLYIPAAFRYVEDFSPEWWQLVTTLKWYHDYWLSQQHDDEGFYDD 60

Query: 60  GINSTNDDVENMISETLDLGIDQEDLNFLEHEFEQLAMSHEDQE 103
                 +DV +++ +  DL  D ED++ +E + E+   S E QE
Sbjct: 61  VDEFDGNDVVDLLPDAFDLDAD-EDIS-IEAQLEEFIKSSEAQE 102


>Medtr7g090630.1 | dehydration-induced protein ERD15 | HC |
           chr7:35670923-35672571 | 20130731
          Length = 115

 Score = 93.2 bits (230), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 68/104 (65%), Gaps = 3/104 (2%)

Query: 1   MALVSGRSSDLNPNAPLFIPAALREVEDFSPQWWELVESSTWFRDYW-SSQHKEEDFGES 59
           MALVSG  S LNPNAPL+IPAA R VEDFSP+WW+LV +  W+ DYW S QH +E F + 
Sbjct: 1   MALVSGGRSTLNPNAPLYIPAAFRYVEDFSPEWWQLVTTLKWYHDYWLSQQHDDEGFYDD 60

Query: 60  GINSTNDDVENMISETLDLGIDQEDLNFLEHEFEQLAMSHEDQE 103
                 +DV +++ +  DL  D ED++ +E + E+   S E QE
Sbjct: 61  VDEFDGNDVVDLLPDAFDLDAD-EDIS-IEAQLEEFIKSSEAQE 102


>Medtr7g090630.3 | dehydration-induced protein ERD15 | HC |
           chr7:35670923-35672571 | 20130731
          Length = 103

 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 3/103 (2%)

Query: 1   MALVSGRSSDLNPNAPLFIPAALREVEDFSPQWWELVESSTWFRDYW-SSQHKEEDFGES 59
           MALVSG  S LNPNAPL+IPAA R VEDFSP+WW+LV +  W+ DYW S QH +E F + 
Sbjct: 1   MALVSGGRSTLNPNAPLYIPAAFRYVEDFSPEWWQLVTTLKWYHDYWLSQQHDDEGFYDD 60

Query: 60  GINSTNDDVENMISETLDLGIDQEDLNFLEHEFEQLAMSHEDQ 102
                 +DV +++ +  DL  D ED++ +E + E+   S E Q
Sbjct: 61  VDEFDGNDVVDLLPDAFDLDAD-EDIS-IEAQLEEFIKSSEAQ 101


>Medtr5g083690.1 | early response-like dehydration-protein | HC |
           chr5:36105513-36106632 | 20130731
          Length = 134

 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 75/174 (43%), Gaps = 49/174 (28%)

Query: 1   MALVSGRSSDLNPNAPLFIPAALREVEDFSPQWWELVESSTWFRDYWSSQHKEEDFGESG 60
           ++     SS LNPNAP+F+P A R VEDFS +WW LV SS WFRDYW      E F    
Sbjct: 4   LSATRTSSSSLNPNAPMFVPLAYRTVEDFSDEWWNLVHSSPWFRDYW----LRERF---- 55

Query: 61  INSTNDDVENMISETLDLGIDQEDLNFLEHEFEQLAMSHEDQEFPVRDIDPN--DGKKPX 118
                                Q+  N+    F    M  ED  F V +I+P   DGK+  
Sbjct: 56  ---------------------QDPQNYQNDSFSDFEMMDEDDLFHVHEIEPQHEDGKE-- 92

Query: 119 XXXXXXXXXXXXXXEPKSPKERG----LKSPKHLEKPAQHVNIKSAPSRIHQPR 168
                         +  S K RG     + P++ EK  + V  + +P  IHQPR
Sbjct: 93  ------------LMKLGSLKWRGSDGWAEVPRYAEKAPKIVKPRVSPRAIHQPR 134