Miyakogusa Predicted Gene

Lj3g3v0819890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0819890.1 Non Characterized Hit- tr|A5ATG0|A5ATG0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,31.53,1e-18,
,gene.g46138.t1.1
         (315 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g023510.1 | PPR containing protein, putative | HC | chr3:7...   346   1e-95
Medtr7g090775.1 | hypothetical protein | HC | chr7:35756717-3575...    85   1e-16
Medtr1g051750.1 | hypothetical protein | LC | chr1:20616591-2061...    84   2e-16
Medtr7g090820.1 | RecA-like protein | LC | chr7:35787927-3578435...    82   1e-15
Medtr7g090830.1 | hypothetical protein | LC | chr7:35790289-3578...    79   7e-15
Medtr7g090780.2 | hypothetical protein | HC | chr7:35762239-3576...    79   8e-15
Medtr7g090780.1 | hypothetical protein | HC | chr7:35762997-3576...    79   8e-15
Medtr7g090800.1 | hypothetical protein | LC | chr7:35767974-3576...    77   3e-14
Medtr7g090860.1 | RecA-like protein | LC | chr7:35800572-3579613...    72   6e-13

>Medtr3g023510.1 | PPR containing protein, putative | HC |
           chr3:7136716-7132150 | 20130731
          Length = 365

 Score =  346 bits (888), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 190/318 (59%), Positives = 222/318 (69%), Gaps = 23/318 (7%)

Query: 1   MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
           +YCH NV +W DS AEEAFQNAKKRYWA +NNLPCDISLPDP+++IEQIDWNP ID E I
Sbjct: 64  IYCHHNVLDWKDSGAEEAFQNAKKRYWANVNNLPCDISLPDPDAYIEQIDWNPCIDAELI 123

Query: 61  KELDKAFFVLPD-EEQGDATKNKRTKTSVDDEDAWKPTGTPLSRVLENKEW---NQEDYH 116
           KELD AFF +PD EEQ +A + KRTK SVD E+ W+   T + R LEN E    NQ DYH
Sbjct: 124 KELDNAFFTVPDEEEQENAIQYKRTKISVDGENPWECAATSVGRGLENNEVQGQNQGDYH 183

Query: 117 DDSGNMDNTDNPWECSVTRQNGGLTGNDNPWECSVTPQNGGLTDNSWKGDHAQSWGWNEG 176
           D+S N+  TDNPW  S                C     N GLTDN+W+G H +S GWNEG
Sbjct: 184 DNSENVGTTDNPWVSSAV--------------CG----NQGLTDNAWEGGHVKSRGWNEG 225

Query: 177 RDHDNQCRDWNSGFSQKDKGWGKVGCSSWSQQQSNDWASFSNSWGCKSSQQNVTPVNTGW 236
           RDH+NQC  WNSG  Q DKGWGKV  +SW  Q+SN+ A+  NSWGCKSSQQNV P+NTGW
Sbjct: 226 RDHNNQCSGWNSGCLQTDKGWGKVRDNSWCHQKSNNLANSGNSWGCKSSQQNVIPMNTGW 285

Query: 237 GNRGANVSGWKQQENTDLSRGLQFKRNNGGCSAWNQSY-QRREGSFRHNSGYNSSQFQRD 295
            N G  V  WKQ EN  ++   QF+RNNGG ++ NQSY Q R GS RHN  YN SQ QRD
Sbjct: 286 RNSGTIVPRWKQHENAYVTSDSQFRRNNGGWNSGNQSYHQMRGGSNRHNPSYNGSQPQRD 345

Query: 296 DRETGNYWRRDRSNKRDF 313
           D +TG+YWRR++S KRDF
Sbjct: 346 DSQTGHYWRREQSRKRDF 363


>Medtr7g090775.1 | hypothetical protein | HC |
           chr7:35756717-35755199 | 20130731
          Length = 278

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 47/65 (72%)

Query: 1   MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
           M  H NV NW+DSA +EAF NAK R+WA IN LPCDI LPDP  +++ +DWN  IDPE  
Sbjct: 44  MSLHPNVVNWDDSAVKEAFNNAKNRFWAEINGLPCDIPLPDPNIYLDDVDWNATIDPELY 103

Query: 61  KELDK 65
            ++++
Sbjct: 104 LDVER 108


>Medtr1g051750.1 | hypothetical protein | LC |
           chr1:20616591-20614664 | 20130731
          Length = 233

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 1/75 (1%)

Query: 1   MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
           M  ++N+ NW+DSAA+EAF NAK R+WA IN LPC+I  PDP+ +I+ IDWN  +DPE +
Sbjct: 51  MCKYNNIVNWDDSAAKEAFDNAKSRFWADINGLPCNIPFPDPDMYIDDIDWNSSVDPELL 110

Query: 61  KELDKAFFVLPDEEQ 75
            +LD      P +E+
Sbjct: 111 LDLDNV-TTFPSQEE 124


>Medtr7g090820.1 | RecA-like protein | LC | chr7:35787927-35784353 |
           20130731
          Length = 343

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 45/65 (69%)

Query: 1   MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
           M  H  V NWNDSA +EAF NAK R+WA IN LPC+I LPDP  +I+ +DWN  ID E  
Sbjct: 60  MCLHPKVVNWNDSAVKEAFDNAKNRFWAEINGLPCNIPLPDPNIYIDDVDWNASIDSELY 119

Query: 61  KELDK 65
            E+++
Sbjct: 120 LEVER 124


>Medtr7g090830.1 | hypothetical protein | LC |
           chr7:35790289-35789120 | 20130731
          Length = 289

 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 46/65 (70%)

Query: 1   MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
           M  H NV NW+DSA +EAF NAK R+WA IN++PCDI  PDP  +I+ IDWN  +D E  
Sbjct: 46  MCLHPNVVNWDDSAVKEAFNNAKNRFWAEINDIPCDIPSPDPNIYIDDIDWNASVDTELY 105

Query: 61  KELDK 65
            ++++
Sbjct: 106 LDVER 110


>Medtr7g090780.2 | hypothetical protein | HC |
           chr7:35762239-35760012 | 20130731
          Length = 251

 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 88/194 (45%), Gaps = 16/194 (8%)

Query: 1   MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
           MY H NV NW+DSA +EAF NAK R+WA IN  PCDI LPDP++ I+ +DWN  +DPE  
Sbjct: 1   MYLHPNVVNWDDSAVKEAFDNAKNRFWAEINEFPCDIPLPDPDTHIDDVDWNASVDPELY 60

Query: 61  KELDKAFFVLPD-EEQGDATKNKRTKTSVDDEDAWKPTGTPLSRVLENKEWNQEDYHDDS 119
           +++++      + EE+G+A     +   ++   +    G       E KE  +       
Sbjct: 61  QDVEREAEARRNMEEKGEAAVILGSSLLLNQSFSGPGWGPTGWGDEEEKEVTK------P 114

Query: 120 GNMDNTDNPWECSVTRQNGGLTGNDNPWECSVTPQNGGLTDNSWKGDHAQSWGWNE---- 175
              +     WE +    N       N WE    P      +  W+       GWN+    
Sbjct: 115 SEPNYAAQGWESNQHENN-----ETNSWEQYRAPVVEHSKEYGWRNGQNDYHGWNQTEQY 169

Query: 176 GRDHDNQCRDWNSG 189
           G D  N+ +  N G
Sbjct: 170 GADLHNKYQGRNGG 183


>Medtr7g090780.1 | hypothetical protein | HC |
           chr7:35762997-35760012 | 20130731
          Length = 314

 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 88/194 (45%), Gaps = 16/194 (8%)

Query: 1   MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
           MY H NV NW+DSA +EAF NAK R+WA IN  PCDI LPDP++ I+ +DWN  +DPE  
Sbjct: 64  MYLHPNVVNWDDSAVKEAFDNAKNRFWAEINEFPCDIPLPDPDTHIDDVDWNASVDPELY 123

Query: 61  KELDKAFFVLPD-EEQGDATKNKRTKTSVDDEDAWKPTGTPLSRVLENKEWNQEDYHDDS 119
           +++++      + EE+G+A     +   ++   +    G       E KE  +       
Sbjct: 124 QDVEREAEARRNMEEKGEAAVILGSSLLLNQSFSGPGWGPTGWGDEEEKEVTK------P 177

Query: 120 GNMDNTDNPWECSVTRQNGGLTGNDNPWECSVTPQNGGLTDNSWKGDHAQSWGWNE---- 175
              +     WE +    N       N WE    P      +  W+       GWN+    
Sbjct: 178 SEPNYAAQGWESNQHENN-----ETNSWEQYRAPVVEHSKEYGWRNGQNDYHGWNQTEQY 232

Query: 176 GRDHDNQCRDWNSG 189
           G D  N+ +  N G
Sbjct: 233 GADLHNKYQGRNGG 246


>Medtr7g090800.1 | hypothetical protein | LC |
           chr7:35767974-35765813 | 20130731
          Length = 307

 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 6/90 (6%)

Query: 1   MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
           M+ H  V NW+DSA +EAF NAK R+WA IN  PCDI LPDP   I+ +D    +DP+  
Sbjct: 64  MFLHPTVINWDDSAVKEAFDNAKNRFWADINGFPCDIPLPDPNIHIDDVDSTASVDPQLY 123

Query: 61  KELDKAFFVLPDEEQGDATKNKRTKTSVDD 90
            +++       + E  D  + KR  T + D
Sbjct: 124 LDVES------EAEASDNMEEKRDVTLIID 147


>Medtr7g090860.1 | RecA-like protein | LC | chr7:35800572-35796139 |
           20130731
          Length = 527

 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 44/64 (68%)

Query: 1   MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
           MY H  V NW+DSA +EAF NAK RYWA IN +P DI LP+P  +I+ +D N  +D E  
Sbjct: 65  MYMHPKVVNWDDSAVKEAFDNAKNRYWAEINGIPWDIPLPNPNIYIDDVDSNASVDSELH 124

Query: 61  KELD 64
           ++++
Sbjct: 125 RDVE 128