Miyakogusa Predicted Gene

Lj3g3v0807810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0807810.1 CUFF.41471.1
         (228 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g008020.1 | 8-amino-7-oxononanoate synthase-like protein |...   398   e-111
Medtr6g033290.1 | long chain base biosynthesis 2a-like protein |...    63   3e-10

>Medtr3g008020.1 | 8-amino-7-oxononanoate synthase-like protein | HC
           | chr3:1291558-1284618 | 20130731
          Length = 473

 Score =  398 bits (1022), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/228 (83%), Positives = 201/228 (88%)

Query: 1   MRRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE 60
           M+RK+V+TDSLFSMDGD+APMVELAELRKKH FLLVIDDAHGTFVCG+NGGGVAEEFNCE
Sbjct: 246 MKRKIVITDSLFSMDGDFAPMVELAELRKKHGFLLVIDDAHGTFVCGKNGGGVAEEFNCE 305

Query: 61  KDVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXXXXK 120
           KDVD+CIGTLSKAAGCHGGFIACS SWKLLIQSRGRSFIFS                  K
Sbjct: 306 KDVDICIGTLSKAAGCHGGFIACSTSWKLLIQSRGRSFIFSTATPVPVAAAAHAAVRVAK 365

Query: 121 LETWRRKAIWNRVKDFHSLTGIPVTSPIISLIVGSEDKALQASRFLLQSGFHVTAIRPPT 180
            ETWRRKAIWNRVKDFH LTGIPVTSPIISLIVG+EDKALQASR LLQ+GFHVTAIRPPT
Sbjct: 366 HETWRRKAIWNRVKDFHLLTGIPVTSPIISLIVGTEDKALQASRHLLQAGFHVTAIRPPT 425

Query: 181 VPPNSCRLRVTLSAVHTRQDLENLSAALSRCINFQDTRIYSSNGYARL 228
           VPPNSCRLRV LSAVHTR+DLENL+AALS CINFQDTRIY  NGYARL
Sbjct: 426 VPPNSCRLRVALSAVHTREDLENLAAALSNCINFQDTRIYGCNGYARL 473


>Medtr6g033290.1 | long chain base biosynthesis 2a-like protein | HC
           | chr6:10618345-10608414 | 20130731
          Length = 490

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 18/216 (8%)

Query: 2   RRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE- 60
           ++ +V+ + ++SM+G+   + E+  + KK+     +D+AH     G+ G GV E    + 
Sbjct: 240 KKIMVIVEGIYSMEGELCKLPEVIAICKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299

Query: 61  KDVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXX--- 117
            D+D+ +GT +K+ G  GG+IA SK     ++    + +++                   
Sbjct: 300 ADIDIMMGTFTKSFGSCGGYIAGSKELIEYLKYTCPAHLYATSISPPAAQQIISSIKVIL 359

Query: 118 --------XXKLETWRRKAIWNRVKDFHSLTGIPV----TSPIISLIVGSEDKALQASRF 165
                     KL   R  +  N  +      G  V     SP++ +++ +  K    SR 
Sbjct: 360 GEDGSSRGAQKLAKIRENS--NFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRE 417

Query: 166 LLQSGFHVTAIRPPTVPPNSCRLRVTLSAVHTRQDL 201
            L+    V  +  P  P    R R+ +SA H+R+DL
Sbjct: 418 CLRQNVAVVTVAFPATPLLLARARICISASHSREDL 453