Miyakogusa Predicted Gene

Lj3g3v0807650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0807650.1 Non Characterized Hit- tr|I1KFP8|I1KFP8_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,90.96,0,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; RRNA_A_DIMETH,Ribosomal RNA adenine
methy,CUFF.41428.1
         (349 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g007750.1 | dimethyladenosine transferase | HC | chr3:1163...   536   e-152
Medtr5g021210.1 | ribosomal RNA adenine dimethylase family prote...   241   8e-64
Medtr3g467370.1 | dimethyladenosine transferase, putative | HC |...   238   5e-63
Medtr7g076280.1 | ribosomal RNA small subunit methyltransferase ...    92   6e-19

>Medtr3g007750.1 | dimethyladenosine transferase | HC |
           chr3:1163183-1158375 | 20130731
          Length = 351

 Score =  536 bits (1381), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 270/339 (79%), Positives = 282/339 (83%), Gaps = 3/339 (0%)

Query: 13  SQQSTPYQGGISFHKSKGQHILKNPLLVDAIVQKSGIKSTDVILEIGPGTGNLTKKLLEA 72
           S Q TPYQGGISFHKSKGQHILKNPLLVD IVQKSGIK+TDV+LEIGPGTGNLTKKLLEA
Sbjct: 14  SSQHTPYQGGISFHKSKGQHILKNPLLVDTIVQKSGIKTTDVVLEIGPGTGNLTKKLLEA 73

Query: 73  GKKVIAVEIDPRMVLELQRRFQGTPYSSRLTVIQGDVLRTELPYFDICVANIPYQISSPL 132
           GKKVIAVEIDPRMVLEL +RFQGTP SSRLTVIQGDVL+TELPYFDICVANIPYQISSPL
Sbjct: 74  GKKVIAVEIDPRMVLELNKRFQGTP-SSRLTVIQGDVLKTELPYFDICVANIPYQISSPL 132

Query: 133 TFKLLSHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARIFHLLKVGRNNFR 192
           TFKLL HQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARI HLLKVGRNNFR
Sbjct: 133 TFKLLKHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARISHLLKVGRNNFR 192

Query: 193 PPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKNVISLLEKNYKT 252
           PPPKVDSSVVRIEP+KPR EV QKEWDGFLRICFNRKNKTLG+IFRQKNVIS+LEKNYKT
Sbjct: 193 PPPKVDSSVVRIEPKKPRHEVNQKEWDGFLRICFNRKNKTLGAIFRQKNVISMLEKNYKT 252

Query: 253 VQALKLSQEGPLEETDTKVDFSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ--SEFKD 310
           VQALKLSQEG L+E DTKVDFS+F                               SEFKD
Sbjct: 253 VQALKLSQEGLLKEADTKVDFSNFADFVDDQGMEMDDDGVDDNDEDEMDVEDGGPSEFKD 312

Query: 311 KVLSVLKEGDFEEKRSXXXXXXXXXXXXXXFNKAGIHFS 349
           KVL VLKEGD+EEKRS              FNK+GIHF+
Sbjct: 313 KVLGVLKEGDYEEKRSSKLTLLEFIYLLSLFNKSGIHFT 351


>Medtr5g021210.1 | ribosomal RNA adenine dimethylase family protein
           | HC | chr5:8153093-8155684 | 20130731
          Length = 332

 Score =  241 bits (615), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 138/331 (41%), Positives = 181/331 (54%), Gaps = 45/331 (13%)

Query: 20  QGGISFHKSKGQHILKNPLLVDAIVQKSGIKSTDVILEIGPGTGNLTKKLLEAGKKVIAV 79
           +  I F+KS+GQHIL NP ++D IVQKS I  +D +LEIGPGTGNLT KLLEA ++V+A+
Sbjct: 27  EESIYFYKSRGQHILTNPRVLDTIVQKSAINPSDTVLEIGPGTGNLTLKLLEASREVVAI 86

Query: 80  EIDPRMVLELQRRFQGTPYSSRLTVIQGDVLRTELPYFDICVANIPYQISSPLTFKLLSH 139
           EID RMV  L+ R       ++LTVI  D LRTE P FD+ VANIPY ISSPL  KL+  
Sbjct: 87  EIDQRMVNILENRALKRGLRNKLTVISKDALRTEFPPFDLVVANIPYGISSPLIIKLIYE 146

Query: 140 QPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARIFHLLKVGRNNFRPPPKVDS 199
              FR A ++ Q+EFA RL+A PGD  + RL VN +L A +  ++ V + +F P PKVDS
Sbjct: 147 TTPFRSATLLLQKEFARRLLANPGDSEFNRLAVNIKLLADVEFVMDVSKRDFLPSPKVDS 206

Query: 200 SVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQK-NVISLLEKNYKTVQALKL 258
           SVV I P+     V   +W  F R CFN KNKTLG+ F+ K  V+ LLE  +  V  L  
Sbjct: 207 SVVIIRPKVNVPAVNLHQWRAFTRTCFNNKNKTLGATFKNKRKVLELLE--FNNVSGLVG 264

Query: 259 SQEGPLEETDTKVDFSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSEFKDKVLSVLKE 318
            Q+                                              FK+K++ VL+E
Sbjct: 265 EQDD------------------------------------------VCLFKEKIVEVLRE 282

Query: 319 GDFEEKRSXXXXXXXXXXXXXXFNKAGIHFS 349
           G F++KR               FN+ G++F 
Sbjct: 283 GGFDDKRPSKLSIEELMHLLSLFNEVGVYFD 313


>Medtr3g467370.1 | dimethyladenosine transferase, putative | HC |
           chr3:27789366-27790372 | 20130731
          Length = 200

 Score =  238 bits (608), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 137/251 (54%), Positives = 145/251 (57%), Gaps = 53/251 (21%)

Query: 100 SRLTVIQGDVLRTELPYFDICVANIPYQISSPLTFKLLSHQPAFRCAIIMFQREFAMRLV 159
           S ++VIQGDVL+TELPYFDICVANIPYQISSPLTFKLL+HQPAFRCAIIMFQREFAMRLV
Sbjct: 2   SEISVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLNHQPAFRCAIIMFQREFAMRLV 61

Query: 160 AQPGDKLYCRLTVNTQLHARIFHLLKVGRNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWD 219
           AQPGDKLYCRLTVNTQLHARI HLLKVGRNNFRPPPKVDS V                  
Sbjct: 62  AQPGDKLYCRLTVNTQLHARISHLLKVGRNNFRPPPKVDSFV------------------ 103

Query: 220 GFLRICFNRKNKTLGSIFRQKNVISLLEKNYKTVQALKLSQEG-PLEETDTKVDFSSFXX 278
                                            VQALKLSQEG  L ET+ KV       
Sbjct: 104 --------------------------------AVQALKLSQEGDSLNETNAKV--DFSDF 129

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXXXQSEFKDKVLSVLKEGDFEEKRSXXXXXXXXXXXX 338
                                     Q+EFK+KVL VLKEGDFEEKRS            
Sbjct: 130 GDFDDDQGMEVDDDEMDVEDGGADEVQNEFKEKVLGVLKEGDFEEKRSSKLTLEKFLDLL 189

Query: 339 XXFNKAGIHFS 349
             FNKAG+HFS
Sbjct: 190 SLFNKAGLHFS 200


>Medtr7g076280.1 | ribosomal RNA small subunit methyltransferase A |
           HC | chr7:28703298-28698178 | 20130731
          Length = 349

 Score = 92.4 bits (228), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 28/235 (11%)

Query: 22  GISFHKSKGQHILKNPLLVDAIVQKSGIKSTDVILEIGPGTGNLTKKLLEAGKKVIAVEI 81
           G S  KS GQ+ + N  + + +V  +G++  DV+LEIGPGTG+LT  L+ +G  V+AVE 
Sbjct: 74  GRSPKKSLGQNYMLNSDINEQLVGVAGVEEGDVVLEIGPGTGSLTNTLINSGAFVLAVEK 133

Query: 82  DPRMVLELQRRFQGTPYSSRLTVIQGDVLRTELPYF---------DI--------CVANI 124
           D  M   +  RF  T    +L V+  D+++  +            DI         VANI
Sbjct: 134 DKHMAALVSERFSST---GKLKVLNEDIVKCHVRSHISSLVGSTEDIDSDTRKAKVVANI 190

Query: 125 PYQISSPLTFKLLSHQPAFRCAIIMFQREFAMRLVAQPGDKL--YCRLTVNTQLHARIFH 182
           P+ IS+ +   LL     F   +++ Q E A+R V +P  +   Y  + +    ++   +
Sbjct: 191 PFYISTDVIKLLLPMGDIFSEVVLLLQEETALRWV-EPSLRTPEYRPINIFVNFYSDPEY 249

Query: 183 LLKVGRNNFRPPPKVDSSVVRIEPRKPRIEVKQ----KEWDGFLRICFNRKNKTL 233
             KV R NF P P VD++VV  + ++P  E  Q    K +   +   FN K K +
Sbjct: 250 KFKVARTNFFPQPNVDAAVVSFKLKQPS-EYPQVSSNKSFFSMVNSAFNEKRKMI 303