Miyakogusa Predicted Gene

Lj3g3v0807630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0807630.1 tr|B9HVH4|B9HVH4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_770743 PE=3
SV=1,46.81,2e-17,coiled-coil,NULL; no description,NULL; HSP20-like
chaperones,HSP20-like chaperone; HSP20,Alpha cryst,CUFF.41427.1
         (379 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g007660.1 | hsp20/alpha crystallin family protein | HC | c...   261   1e-69
Medtr8g046245.1 | hsp20/alpha crystallin family protein | HC | c...   121   1e-27
Medtr5g087470.1 | hsp20/alpha crystallin family protein | HC | c...    67   3e-11
Medtr4g107860.1 | hsp20/alpha crystallin family protein | HC | c...    62   1e-09
Medtr5g087450.1 | hsp20/alpha crystallin family protein | HC | c...    56   7e-08
Medtr3g007480.1 | transmembrane protein, putative | HC | chr3:10...    54   2e-07
Medtr4g091590.1 | 17.6 kDa class I heat shock protein | HC | chr...    51   2e-06
Medtr4g088475.1 | 17.6 kDa class I heat shock protein | HC | chr...    50   5e-06
Medtr5g081530.1 | 17.6 kDa class I heat shock protein | HC | chr...    49   6e-06
Medtr6g061940.1 | 17.6 kDa class I heat shock protein | HC | chr...    49   7e-06
Medtr6g061850.1 | 17.6 kDa class I heat shock protein | HC | chr...    49   9e-06

>Medtr3g007660.1 | hsp20/alpha crystallin family protein | HC |
           chr3:1112278-1109865 | 20130731
          Length = 406

 Score =  261 bits (666), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 189/424 (44%), Positives = 227/424 (53%), Gaps = 63/424 (14%)

Query: 1   MAMRPETPTFGTPRSARAVYKNIQPKSEMKENEEAYFLRIYLPGFTKESIQISYLLPSRM 60
           MAMR  TPT  T  S   VY+  QPKSE+KENEEAYFL I+LPGF KE I I ++  SR 
Sbjct: 1   MAMRSRTPTSRTKPSPNPVYETFQPKSELKENEEAYFLHIHLPGFIKERINIKFVGLSRT 60

Query: 61  VRIVGERRIDASNKWSLFNQTYPVPENCEVEKLQGKIEHGSLIVTMPKKFIPPPTPIAQV 120
           +RI GER++  SNKWSLF+Q+YPVPENCEVEKLQGK E+G+LIV MPKK+   P+  +QV
Sbjct: 61  LRITGERQLLGSNKWSLFDQSYPVPENCEVEKLQGKFENGTLIVAMPKKY---PSLKSQV 117

Query: 121 XXXXXXXXXXXXXXXATRVEQQEP--------IGDKKISS------------DALKELKG 160
                           T +  + P        + DKK+ S            + LKE KG
Sbjct: 118 ETTKEKIVPSPRTPKGTNIPSKPPTRVLEEPIVRDKKVPSSPSNIVTGLNDLNKLKEQKG 177

Query: 161 AQKDTSPSQKPKDTTSHRPDDYKGLRTL---SPSKSFEEEPVLKTKATAAIPKEQTGKPQ 217
            Q DT PSQ PK          K L       P   +EE  V K K+ A   K Q  K Q
Sbjct: 178 TQ-DTFPSQSPK-------GKLKALEPFVESRPQNVYEENNVPKGKSQAIGAKAQ--KSQ 227

Query: 218 MGIEPN-------TKQIDEEKLQEEIRKKAILEIXXXXXXXXXXXXXXXXXXXXXGADIG 270
             IEP         KQID+EK+QEE RKK+ILE                        +  
Sbjct: 228 EEIEPRFGFKMDPIKQIDDEKIQEENRKKSILETIRKQLHEDEKKSVANKKIE----EDK 283

Query: 271 KPYYESRKPEKYLDHDVVLKGKEIKARKES-------APKSSDDKGKD-------RAKKD 316
           K Y  S+  ++Y+DH++ L+GKEIKARKES       APK +  K KD       R KKD
Sbjct: 284 KTYESSKLDQQYIDHNMFLEGKEIKARKESSKGEEYFAPKDA-KKEKDTTIEKTKRYKKD 342

Query: 317 EIYTIGKGV-KEVGTWTSKVVTRIGEGKLDDQEKTLVANMXXXXXXXXXXXXYVTYKFTS 375
           E YT  KG+ KEV T  S+VV RIGEGKL++QEK LVANM            Y TYKFTS
Sbjct: 343 EKYTKEKGIFKEVATSASQVVKRIGEGKLNEQEKPLVANMGAAILVIVALGAYATYKFTS 402

Query: 376 SDKT 379
           S K 
Sbjct: 403 SSKN 406


>Medtr8g046245.1 | hsp20/alpha crystallin family protein | HC |
           chr8:18109152-18110970 | 20130731
          Length = 411

 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 8   PTFGTPRSARAVYKNIQPKSEMKENEEAYFLRIYLPGFTKESIQISYLLPSRMVRIVGER 67
           PTF +  S R VY+ +QP SEMKE  EAY L +YLPGFTK+ ++I  L  SR +RI GER
Sbjct: 12  PTFRSQLSVRRVYETLQPPSEMKETPEAYLLHVYLPGFTKDQMKIELLDMSRKLRITGER 71

Query: 68  RIDASNKWSLFNQTYPVPENCEVEKLQGKIEHGSLIVTMPKKFIPPPTPIA 118
            I   NKW  F+QTYPVPEN E EKL+ K E G+LI+ M KK I   + +A
Sbjct: 72  PIPG-NKWRKFDQTYPVPENSEAEKLEAKFEQGTLILKMQKKPISQSSQVA 121


>Medtr5g087470.1 | hsp20/alpha crystallin family protein | HC |
           chr5:37900082-37902034 | 20130731
          Length = 269

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 2/101 (1%)

Query: 19  VYKNIQPKSEMKENEEAYFLRIYLPGFTKESIQISYLLPSRMVRIVGERRIDASNKWSLF 78
           VYK++QP  E  E+E +  L + LPGFTKE +++  +    ++RI  ER+    N W  F
Sbjct: 12  VYKDLQPYHEWNEDETSATLVLMLPGFTKEQLRVQ-VTSKGVLRINCERQ-GIENIWHRF 69

Query: 79  NQTYPVPENCEVEKLQGKIEHGSLIVTMPKKFIPPPTPIAQ 119
            + +P+P  CE   +  K E G L +  PK   P   P  Q
Sbjct: 70  GKEFPIPPYCETNDVSAKFERGVLSIMFPKLITPANKPQEQ 110


>Medtr4g107860.1 | hsp20/alpha crystallin family protein | HC |
           chr4:44704953-44703683 | 20130731
          Length = 260

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 4/113 (3%)

Query: 1   MAMRPETPTFGTPR-SAR-AVYKNIQPKSEMKENEEAYFLRIYLPGFTKESIQISYLLPS 58
           MA    TP +G  R  AR +V ++I P S   E+  A++L + LP F KE +++      
Sbjct: 1   MANVRGTPRYGVIRPVARPSVVEDIVPNSAWTEDSAAHYLVVDLPEFVKEDVKLQVDSSG 60

Query: 59  RMVRIVGERRIDASNKWSLFNQTYPVPENCEVEKLQGKIEHGSLIVTMPKKFI 111
           R+V + GER+  +  K   F+ ++P P + E++ + GK + G L VT+PK+ +
Sbjct: 61  RIV-VKGERQA-SEQKRVRFHLSFPEPNDSEIDNIAGKFDGGILYVTLPKRIV 111


>Medtr5g087450.1 | hsp20/alpha crystallin family protein | HC |
           chr5:37892934-37894362 | 20130731
          Length = 254

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 7/107 (6%)

Query: 14  RSARAVYKNIQPKSEMKENEEAYFLRIYLPGFTKESIQISYLLPSRMVRIVGERRIDASN 73
           R A  +Y   +P S+    + +  L + LPGF K+ +++  +  +R++R+ GER+++   
Sbjct: 8   READRIYDEFEPPSDWDHEDTSDTLILMLPGFKKDQLRVQ-VTSTRVLRVSGERQMN-EK 65

Query: 74  KWSLFNQTYPVPENCEVEKLQGKIEHGSLIVTMPK-----KFIPPPT 115
           KW  F + + +P + +   +  K E G L + +PK       +P PT
Sbjct: 66  KWRRFRKEFSIPPHSDTNNIGAKFEAGILYIKLPKLISQQNIVPTPT 112


>Medtr3g007480.1 | transmembrane protein, putative | HC |
           chr3:1038871-1036756 | 20130731
          Length = 464

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 20  YKNIQPKSEMKENEEAYFLRIYLP-GFTKESIQISYLLPSRMVRIVGERRIDASNKWSLF 78
           Y+++ PK E K   E++ L + +P GF +  I          VR+ GER    SNK   F
Sbjct: 9   YEDVHPKIEKKNTPESHLLIVQIPDGFARGDIGAKVEYDFGRVRVFGERS-GGSNKMIRF 67

Query: 79  NQTYPVPENCEVEKLQGKIEHGSLIVTMPKKFIP 112
           N  Y +P +C++  ++GKI+    IVT+  + IP
Sbjct: 68  NVKYQIPSHCDIGNIKGKID--GKIVTITMRNIP 99


>Medtr4g091590.1 | 17.6 kDa class I heat shock protein | HC |
           chr4:36296932-36296453 | 20130731
          Length = 159

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 58/102 (56%), Gaps = 11/102 (10%)

Query: 23  IQPKSEMKENEEAYFLRIYLPGFTKESIQISYLLPSRMVRIVGERRI---DASNKWSL-- 77
           +  + + KE  EA+  +  LPG  KE +++  +   R+++I GER +   D +N+W    
Sbjct: 50  VSTRIDWKETPEAHVFKADLPGLKKEEVKVE-IEDDRVLQISGERNVEKEDKNNQWHRVE 108

Query: 78  -----FNQTYPVPENCEVEKLQGKIEHGSLIVTMPKKFIPPP 114
                F + + +PEN ++++++  +E+G L VT+PK+ +  P
Sbjct: 109 RSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKP 150


>Medtr4g088475.1 | 17.6 kDa class I heat shock protein | HC |
           chr4:35097471-35098496 | 20130731
          Length = 231

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 11/97 (11%)

Query: 28  EMKENEEAYFLRIYLPGFTKESIQISYLLPSRMVRIVGERRI---DASNKWSL------- 77
           + KE  EA+     LPG  KE +++  +   R+++I GER +   D +++W         
Sbjct: 54  DWKETPEAHVFEADLPGLKKEEVKVE-IEGDRVLQISGERNVEKEDKNDQWHRVERSSGK 112

Query: 78  FNQTYPVPENCEVEKLQGKIEHGSLIVTMPKKFIPPP 114
           F + + +PEN ++++++  +E+G L VT+PK+ I  P
Sbjct: 113 FMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIKKP 149


>Medtr5g081530.1 | 17.6 kDa class I heat shock protein | HC |
           chr5:34918670-34919471 | 20130731
          Length = 150

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 11/117 (9%)

Query: 1   MAMRPETPTFGTPRSARAVYKNIQPKSEMKENEEAYFLRIYLPGFTKESIQISYLLPSRM 60
            +M    P  G P SAR        + + KE +EA+   + LPG  KE +++  +    +
Sbjct: 19  FSMDIWDPLQGFPSSARETTALANTRVDWKETQEAHVFSVDLPGLKKEEVKVE-IEDGNV 77

Query: 61  VRIVGER---RIDASNKWSL-------FNQTYPVPENCEVEKLQGKIEHGSLIVTMP 107
           ++I GER   + +  +KW         F + + +PEN ++++++  +E+G L VT+P
Sbjct: 78  LQISGERNKEQEEKDDKWHRVERSSGKFMRRFRLPENVKMDQVKAGMENGVLTVTVP 134


>Medtr6g061940.1 | 17.6 kDa class I heat shock protein | HC |
           chr6:24041280-24040583 | 20130731
          Length = 159

 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 56/97 (57%), Gaps = 11/97 (11%)

Query: 28  EMKENEEAYFLRIYLPGFTKESIQISYLLPSRMVRIVGERRI---DASNKWSL------- 77
           + KE  EA+  +  LPG  KE +++  +   R+++I GER +   D +++W         
Sbjct: 55  DWKETPEAHVFKADLPGLKKEEVKVE-IEDDRVLQISGERNVEKEDKNDQWHRVERSSGK 113

Query: 78  FNQTYPVPENCEVEKLQGKIEHGSLIVTMPKKFIPPP 114
           F + + +PEN ++++++  +E+G L VT+PK+ +  P
Sbjct: 114 FMRRFRLPENAKMDQVKAAMENGILTVTVPKEEVKKP 150


>Medtr6g061850.1 | 17.6 kDa class I heat shock protein | HC |
           chr6:24014831-24014010 | 20130731
          Length = 159

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 58/102 (56%), Gaps = 11/102 (10%)

Query: 23  IQPKSEMKENEEAYFLRIYLPGFTKESIQISYLLPSRMVRIVGERRI---DASNKWSL-- 77
           +  + + KE  EA+  +  LPG  KE +++  +   R+++I GER +   D +++W    
Sbjct: 50  VSTRIDWKETPEAHVFKADLPGLKKEEVKVE-IEGDRVLQISGERNVEKEDKNDQWHRVE 108

Query: 78  -----FNQTYPVPENCEVEKLQGKIEHGSLIVTMPKKFIPPP 114
                F + + +PEN ++++++  +E+G L VT+PK+ +  P
Sbjct: 109 RSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKP 150