Miyakogusa Predicted Gene

Lj3g3v0807610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0807610.1 Non Characterized Hit- tr|I1LYL1|I1LYL1_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,78.73,0,THF_DHG_CYH,Tetrahydrofolate
dehydrogenase/cyclohydrolase, catalytic domain; BIFUNCTIONAL PROTEIN
FO,CUFF.41425.1
         (222 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g007490.1 | methylenetetrahydrofolate dehydrogenase | HC |...   306   1e-83
Medtr1g030450.1 | methylenetetrahydrofolate dehydrogenase | HC |...   205   2e-53
Medtr7g076680.3 | methylenetetrahydrofolate dehydrogenase | HC |...   191   6e-49
Medtr7g076680.1 | methylenetetrahydrofolate dehydrogenase | HC |...   190   8e-49
Medtr7g076680.2 | methylenetetrahydrofolate dehydrogenase | HC |...   189   2e-48
Medtr7g108580.1 | cytoplasmic C-1-tetrahydrofolate synthase | HC...   170   9e-43
Medtr3g007580.1 | methylenetetrahydrofolate dehydrogenase | HC |...    51   7e-07

>Medtr3g007490.1 | methylenetetrahydrofolate dehydrogenase | HC |
           chr3:1040089-1043268 | 20130731
          Length = 363

 Score =  306 bits (784), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 149/221 (67%), Positives = 182/221 (82%), Gaps = 4/221 (1%)

Query: 5   ATAAMVALHRTLRNAL--HSFSAPSSYALFGPNLPDVWIPRENTSP-HTHFPETFQWSNG 61
           + + +VA H+TLR  L  HSFS+P S    GPNLPDVW+PR NTSP HT  P++ QW++ 
Sbjct: 9   SLSGIVASHKTLRKVLYLHSFSSPPSSTFLGPNLPDVWVPRHNTSPPHTLLPQSLQWTDN 68

Query: 62  NGHNNAAILEGKPIAKDIKFEVAEDIRRMRSGIGKFPRLAVVFVGDRSDSHTFINIKLKA 121
           + H+ AAILEGKPIA  IK +VA++IRRM+S IGKFP+LA V VGDR DSHTFI++K KA
Sbjct: 69  DDHS-AAILEGKPIANHIKLKVADEIRRMKSDIGKFPKLAFVLVGDRRDSHTFIHLKSKA 127

Query: 122 CDQVGIETVVAQFPENCTENELLDAVSSFSDDPGVHGIVVQLPLPQHLEEEKIINVVSPE 181
           C++VGIETVV+Q PENCTENELLD VS  +DD  VHGI+VQLPLPQHL+EE+I+N+VSPE
Sbjct: 128 CEKVGIETVVSQLPENCTENELLDVVSGLNDDQDVHGIIVQLPLPQHLDEERIMNIVSPE 187

Query: 182 KDVDGFHPTNMGNLAKRGRKPFFVPCAPKGCIELLLRHGVE 222
           KDVDGFHP N+GNLA+ GRKPFF+PCA + CIELLL HG+E
Sbjct: 188 KDVDGFHPLNIGNLARSGRKPFFIPCASRSCIELLLNHGIE 228


>Medtr1g030450.1 | methylenetetrahydrofolate dehydrogenase | HC |
           chr1:10595287-10589370 | 20130731
          Length = 361

 Score =  205 bits (522), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 92/195 (47%), Positives = 135/195 (69%), Gaps = 6/195 (3%)

Query: 28  SYALFGPNLPDVWIPRENTSPHTHFPETFQWSNGNGHNNAAILEGKPIAKDIKFEVAEDI 87
           S AL   +LPD+W P  +        ++F          A +++GK +A +I+ ++A+ +
Sbjct: 37  SPALASLDLPDIWTPNSSCQSVPDIHKSFN------EQTATVIDGKLMATEIRSKIADQV 90

Query: 88  RRMRSGIGKFPRLAVVFVGDRSDSHTFINIKLKACDQVGIETVVAQFPENCTENELLDAV 147
           R+M+ G+GK P LAV+ VG R DS T++  K+ AC++VG+++VV + P +C + ++ +A+
Sbjct: 91  RQMKKGLGKVPGLAVILVGQRRDSLTYVRNKIIACEEVGMKSVVTELPTDCADADVQNAI 150

Query: 148 SSFSDDPGVHGIVVQLPLPQHLEEEKIINVVSPEKDVDGFHPTNMGNLAKRGRKPFFVPC 207
             F+ DP +HGI+VQLPLPQHL+EEKI++ V  EKDVDGFHP NMGNLA RGR+P F+PC
Sbjct: 151 MRFNKDPSIHGILVQLPLPQHLDEEKILDAVCLEKDVDGFHPVNMGNLALRGREPLFIPC 210

Query: 208 APKGCIELLLRHGVE 222
             K CIELL+R GVE
Sbjct: 211 TTKACIELLIRSGVE 225


>Medtr7g076680.3 | methylenetetrahydrofolate dehydrogenase | HC |
           chr7:28900731-28896287 | 20130731
          Length = 368

 Score =  191 bits (484), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 84/153 (54%), Positives = 113/153 (73%)

Query: 69  ILEGKPIAKDIKFEVAEDIRRMRSGIGKFPRLAVVFVGDRSDSHTFINIKLKACDQVGIE 128
           +++GK +AK I+ E+A ++ RMR   G  P LAV+ VGDR DS T++  K KAC+ VGI 
Sbjct: 79  VIDGKTVAKQIRDEIAVEVSRMREAAGVIPGLAVILVGDRKDSATYVRNKKKACETVGIN 138

Query: 129 TVVAQFPENCTENELLDAVSSFSDDPGVHGIVVQLPLPQHLEEEKIINVVSPEKDVDGFH 188
           ++    PE+ TE E+L+ ++ ++DDP VHGI+VQLPLP H+ E+ ++N V  EKDVDGFH
Sbjct: 139 SLEVNLPEDSTEEEVLNHIAGYNDDPSVHGILVQLPLPSHMNEQNVLNAVRIEKDVDGFH 198

Query: 189 PTNMGNLAKRGRKPFFVPCAPKGCIELLLRHGV 221
           P N+G LA RGR+P FVPC PKGCIELL R+GV
Sbjct: 199 PLNIGRLAMRGREPLFVPCTPKGCIELLHRYGV 231


>Medtr7g076680.1 | methylenetetrahydrofolate dehydrogenase | HC |
           chr7:28900731-28896287 | 20130731
          Length = 351

 Score =  190 bits (483), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 84/153 (54%), Positives = 113/153 (73%)

Query: 69  ILEGKPIAKDIKFEVAEDIRRMRSGIGKFPRLAVVFVGDRSDSHTFINIKLKACDQVGIE 128
           +++GK +AK I+ E+A ++ RMR   G  P LAV+ VGDR DS T++  K KAC+ VGI 
Sbjct: 62  VIDGKTVAKQIRDEIAVEVSRMREAAGVIPGLAVILVGDRKDSATYVRNKKKACETVGIN 121

Query: 129 TVVAQFPENCTENELLDAVSSFSDDPGVHGIVVQLPLPQHLEEEKIINVVSPEKDVDGFH 188
           ++    PE+ TE E+L+ ++ ++DDP VHGI+VQLPLP H+ E+ ++N V  EKDVDGFH
Sbjct: 122 SLEVNLPEDSTEEEVLNHIAGYNDDPSVHGILVQLPLPSHMNEQNVLNAVRIEKDVDGFH 181

Query: 189 PTNMGNLAKRGRKPFFVPCAPKGCIELLLRHGV 221
           P N+G LA RGR+P FVPC PKGCIELL R+GV
Sbjct: 182 PLNIGRLAMRGREPLFVPCTPKGCIELLHRYGV 214


>Medtr7g076680.2 | methylenetetrahydrofolate dehydrogenase | HC |
           chr7:28900731-28896314 | 20130731
          Length = 347

 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 84/153 (54%), Positives = 113/153 (73%)

Query: 69  ILEGKPIAKDIKFEVAEDIRRMRSGIGKFPRLAVVFVGDRSDSHTFINIKLKACDQVGIE 128
           +++GK +AK I+ E+A ++ RMR   G  P LAV+ VGDR DS T++  K KAC+ VGI 
Sbjct: 58  VIDGKTVAKQIRDEIAVEVSRMREAAGVIPGLAVILVGDRKDSATYVRNKKKACETVGIN 117

Query: 129 TVVAQFPENCTENELLDAVSSFSDDPGVHGIVVQLPLPQHLEEEKIINVVSPEKDVDGFH 188
           ++    PE+ TE E+L+ ++ ++DDP VHGI+VQLPLP H+ E+ ++N V  EKDVDGFH
Sbjct: 118 SLEVNLPEDSTEEEVLNHIAGYNDDPSVHGILVQLPLPSHMNEQNVLNAVRIEKDVDGFH 177

Query: 189 PTNMGNLAKRGRKPFFVPCAPKGCIELLLRHGV 221
           P N+G LA RGR+P FVPC PKGCIELL R+GV
Sbjct: 178 PLNIGRLAMRGREPLFVPCTPKGCIELLHRYGV 210


>Medtr7g108580.1 | cytoplasmic C-1-tetrahydrofolate synthase | HC |
           chr7:44234483-44237478 | 20130731
          Length = 293

 Score =  170 bits (431), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 76/155 (49%), Positives = 106/155 (68%)

Query: 67  AAILEGKPIAKDIKFEVAEDIRRMRSGIGKFPRLAVVFVGDRSDSHTFINIKLKACDQVG 126
           A +++GK +A+ I+ E+ +++R +    GK P LAVV VG+R DS +++  K KAC  +G
Sbjct: 2   ATVIDGKAVAQTIRSEITDEVRLLSEKYGKVPGLAVVIVGNRQDSESYVRTKRKACADLG 61

Query: 127 IETVVAQFPENCTENELLDAVSSFSDDPGVHGIVVQLPLPQHLEEEKIINVVSPEKDVDG 186
           I+      PE  +E E++  V   + DP VHGI+VQLPLP+H+ EEK++  +S EKDVDG
Sbjct: 62  IKNFDIDLPEQISEAEVIKHVHQLNADPNVHGILVQLPLPKHINEEKVLTEISLEKDVDG 121

Query: 187 FHPTNMGNLAKRGRKPFFVPCAPKGCIELLLRHGV 221
           FHP N+G LA +GR P FVPC PK C+ELL R GV
Sbjct: 122 FHPLNIGKLAMKGRDPLFVPCTPKACLELLSRSGV 156


>Medtr3g007580.1 | methylenetetrahydrofolate dehydrogenase | HC |
           chr3:1065282-1067045 | 20130731
          Length = 134

 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/30 (73%), Positives = 25/30 (83%), Gaps = 1/30 (3%)

Query: 194 NLAKRGRKPFFVPCAPKGCIE-LLLRHGVE 222
           NLA+ GRKPFF+PCA K CIE LLL HG+E
Sbjct: 15  NLARSGRKPFFIPCASKSCIELLLLNHGIE 44