Miyakogusa Predicted Gene

Lj3g3v0807600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0807600.1 tr|G7IVB3|G7IVB3_MEDTR 17.6 kDa class I heat
shock protein OS=Medicago truncatula GN=MTR_3g007660
PE,27.93,0.0000000000001,seg,NULL; coiled-coil,NULL,CUFF.41424.1
         (407 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g007480.1 | transmembrane protein, putative | HC | chr3:10...   209   4e-54
Medtr3g007660.1 | hsp20/alpha crystallin family protein | HC | c...    67   3e-11
Medtr8g046245.1 | hsp20/alpha crystallin family protein | HC | c...    62   7e-10
Medtr5g087470.1 | hsp20/alpha crystallin family protein | HC | c...    57   4e-08
Medtr6g478190.1 | hsp20/alpha crystallin family protein | HC | c...    50   4e-06

>Medtr3g007480.1 | transmembrane protein, putative | HC |
           chr3:1038871-1036756 | 20130731
          Length = 464

 Score =  209 bits (532), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 164/465 (35%), Positives = 216/465 (46%), Gaps = 77/465 (16%)

Query: 7   DVQVQCETQETPESHLLLVNIPDGFAREHIGAKVEYDFGRVRVYGEKPLGNNKSSRFDER 66
           DV  + E + TPESHLL+V IPDGFAR  IGAKVEYDFGRVRV+GE+  G+NK  RF+ +
Sbjct: 11  DVHPKIEKKNTPESHLLIVQIPDGFARGDIGAKVEYDFGRVRVFGERSGGSNKMIRFNVK 70

Query: 67  YKVPAHCDISRVRGRFDGKTITIIMPKIPG-LVPETTEQEPPKPAVQETQPNQGNDKDET 125
           Y++P+HCDI  ++G+ DGK +TI M  IP   VP+  E+   +   +  + N   D+  T
Sbjct: 71  YQIPSHCDIGNIKGKIDGKIVTITMRNIPDRAVPQEEEEPTQENNNKAEEVNDQKDQQNT 130

Query: 126 PQQSAIGDDKEKATASEVKDQKGTQEGTSSEQDPKSTIEGKEEGKDHEASTSTSAPE--- 182
             Q    + + K  A +V   +  QE  +S++D  + ++ K E   HE STS  A +   
Sbjct: 131 SDQDPKSNVESKEDAQKVTMPQKVQE-ENSQKDQVTKVDSKGETY-HETSTSQEATQEST 188

Query: 183 --------ATEESLPQKGTQEPTPQNATATRDAKLQTXXXXXXXXXXXXXXXXXXSLPQK 234
                   + +ESLPQKG QE   Q  +  +  +                     SLPQK
Sbjct: 189 PQKVQQEISQKESLPQKG-QEEISQKESLPQKGQEAISQKESLPQKGQEEISQKKSLPQK 247

Query: 235 -------------------------------------------GTQEPTPQNA------- 244
                                                      GT E  PQ         
Sbjct: 248 DQEEISQKESLAQKGQEEISQKSQVTKVESKENTHQETSTQSEGTHESNPQKGQDQGIQN 307

Query: 245 --TATRDAKLQTEATSXXXXXXXXXXXXXXXXPNNKTSEKGNTPEEKAVVADXXXXXXXX 302
             T T+DAKLQTE +                  + K   K    E+  VV D        
Sbjct: 308 KPTDTKDAKLQTEESVKDENKEKQMVVKEETKEHLK---KAIESEKSHVVDDSSPTLERK 364

Query: 303 XXXXXXXXXXXXXXLPKSTEKVKGKE-INGKSGADENETKSDKKAMVESTRTKIKEKASS 361
                          PK T K KGKE IN K G        D+K ++ESTRT+IK+ A S
Sbjct: 365 TKDESKGSASVETFPPKKTYKEKGKEMINDKFGD------HDEKKILESTRTRIKDMALS 418

Query: 362 AYQALTSMTNRFNEEDKQKLIYMGAAVVVLTLSVYASYKFRSSRR 406
             QA+TS   RF+EEDKQKLIY GA ++V+ L VYASYK+RSSRR
Sbjct: 419 TTQAVTSYAKRFSEEDKQKLIYTGATILVVALGVYASYKYRSSRR 463


>Medtr3g007660.1 | hsp20/alpha crystallin family protein | HC |
           chr3:1112278-1109865 | 20130731
          Length = 406

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 25/179 (13%)

Query: 8   VQVQCETQETPESHLLLVNIPDGFAREHIGAKVEYDFGRVRVYGEKPL-GNNKSSRFDER 66
            Q + E +E  E++ L +++P GF +E I  K       +R+ GE+ L G+NK S FD+ 
Sbjct: 23  FQPKSELKENEEAYFLHIHLP-GFIKERINIKFVGLSRTLRITGERQLLGSNKWSLFDQS 81

Query: 67  YKVPAHCDISRVRGRFDGKTITIIMP-KIPGL---VPETTEQEPPKPAVQETQPNQGNDK 122
           Y VP +C++ +++G+F+  T+ + MP K P L   V  T E+  P P      P   N  
Sbjct: 82  YPVPENCEVEKLQGKFENGTLIVAMPKKYPSLKSQVETTKEKIVPSPRT----PKGTNIP 137

Query: 123 DETP----QQSAIGDDKEKATASEV----------KDQKGTQEGTSSEQDPKSTIEGKE 167
            + P    ++  + D K  ++ S +          K+QKGTQ+ T   Q PK  ++  E
Sbjct: 138 SKPPTRVLEEPIVRDKKVPSSPSNIVTGLNDLNKLKEQKGTQD-TFPSQSPKGKLKALE 195


>Medtr8g046245.1 | hsp20/alpha crystallin family protein | HC |
           chr8:18109152-18110970 | 20130731
          Length = 411

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 34/208 (16%)

Query: 8   VQVQCETQETPESHLLLVNIPDGFAREHIGAKVEYDFGR-VRVYGEKPLGNNKSSRFDER 66
           +Q   E +ETPE++LL V +P GF ++ +  ++  D  R +R+ GE+P+  NK  +FD+ 
Sbjct: 27  LQPPSEMKETPEAYLLHVYLP-GFTKDQMKIEL-LDMSRKLRITGERPIPGNKWRKFDQT 84

Query: 67  YKVPAHCDISRVRGRFDGKTITIIMPKIPGLVPETTEQEPPKPAVQETQPNQGNDKD--- 123
           Y VP + +  ++  +F+  T+ + M K P  + ++++  P     QE + +  N+KD   
Sbjct: 85  YPVPENSEAEKLEAKFEQGTLILKMQKKP--ISQSSQVAP----QQEVEKSPSNNKDLDE 138

Query: 124 ---ETPQQSAIGDDKEKATASEVKDQKGTQEGTSSEQDPKSTIEGKEEGKDHEASTSTSA 180
              E  Q++ I   +        KD K     TS       +IE K +  D  +S     
Sbjct: 139 AKVEKAQETNIPPPQSTNLEESTKDMKSDSPQTS------QSIEKKTQNDDDTSS----- 187

Query: 181 PEATEESLPQKGTQ--EPTPQNATATRD 206
                  +PQKG Q  EP P +   T D
Sbjct: 188 ------QIPQKGQQEFEPKPTSKDTTND 209


>Medtr5g087470.1 | hsp20/alpha crystallin family protein | HC |
           chr5:37900082-37902034 | 20130731
          Length = 269

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 72/135 (53%), Gaps = 3/135 (2%)

Query: 6   KDVQVQCETQETPESHLLLVNIPDGFAREHIGAKVEYDFGRVRVYGEKPLGNNKSSRFDE 65
           KD+Q   E  E   S  L++ +P GF +E +  +V    G +R+  E+    N   RF +
Sbjct: 14  KDLQPYHEWNEDETSATLVLMLP-GFTKEQLRVQVTSK-GVLRINCERQGIENIWHRFGK 71

Query: 66  RYKVPAHCDISRVRGRFDGKTITIIMPKIPGLVPETTEQEP-PKPAVQETQPNQGNDKDE 124
            + +P +C+ + V  +F+   ++I+ PK+     +  EQEP   P  + + P Q +D+ +
Sbjct: 72  EFPIPPYCETNDVSAKFERGVLSIMFPKLITPANKPQEQEPITNPPQESSMPQQLSDEPK 131

Query: 125 TPQQSAIGDDKEKAT 139
            P Q+ + DD+++++
Sbjct: 132 APTQAQVVDDQQESS 146


>Medtr6g478190.1 | hsp20/alpha crystallin family protein | HC |
           chr6:29070474-29068817 | 20130731
          Length = 165

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 30  GFAREHIGAKVEYDFGRVRVYGEKPLGNNKSSRFDERYKVPAHCDISRVRGRFDGKTITI 89
           GF +E +  +   + G +++YGE+ LG+ K SRF +  ++   CD++ ++ +F    ++I
Sbjct: 38  GFKKEQLKVQTN-NKGILKIYGERTLGSKKCSRFHKEIRISRDCDVNGIQAKFSQGILSI 96

Query: 90  IMPK 93
           IMPK
Sbjct: 97  IMPK 100