Miyakogusa Predicted Gene

Lj3g3v0807580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0807580.1 Non Characterized Hit- tr|K0SZ12|K0SZ12_THAOC
Uncharacterized protein OS=Thalassiosira oceanica
PE=4,30,0.00000000004,CrbC,Camphor resistance CrcB protein;
CRCB,Camphor resistance CrcB protein; seg,NULL,CUFF.41422.1
         (339 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g007470.1 | camphor resistance CrcB-like protein | HC | ch...   372   e-103
Medtr3g072830.1 | camphor resistance CrcB-like protein | HC | ch...   300   1e-81
Medtr3g072840.1 | camphor resistance CrcB-like protein | LC | ch...   281   4e-76

>Medtr3g007470.1 | camphor resistance CrcB-like protein | HC |
           chr3:1033031-1036474 | 20130731
          Length = 385

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/325 (62%), Positives = 227/325 (69%), Gaps = 8/325 (2%)

Query: 22  GSQKLKPYPGESTSVSSIVPLTSELRSPLFSNQREGSQDIKH--ELDKELSKSLHYALCL 79
           G  KL+ + G S SVSSI+PLTSE  SPL SN+RE S+DI+   E  KEL K L  A  L
Sbjct: 6   GVNKLQLHLGASNSVSSILPLTSEQMSPLLSNEREDSEDIQQLQEPSKELPKLLDNASYL 65

Query: 80  LHLAVFGILGVLTRYILGLLFGPGIGRVTSDQTILYHDLPSNMVGSFVMGWLGVVFKEDI 139
           +HLAVFGILGVLTRY L  LFGP +G VTSDQTILY DLPSNMVGSF+MGW GVVFKEDI
Sbjct: 66  IHLAVFGILGVLTRYTLDKLFGPSVGHVTSDQTILYLDLPSNMVGSFLMGWFGVVFKEDI 125

Query: 140 SNVSEYLAIALTTGYLGSLTTFSGWNQKMLEHSAAGNWLYSVLGYLIGLSLVAFASIISG 199
           SNVS+YLA+ALTTGYLGSLTTFSGWNQKMLE S  GNWL+ VLG+LIGL LVAF SII G
Sbjct: 126 SNVSKYLAVALTTGYLGSLTTFSGWNQKMLELSVTGNWLFVVLGFLIGLFLVAF-SIIFG 184

Query: 200 IETAKGFRWLLSRPKMSSGSETGRSKINIKC-----HLEAMXXXXXXXXXXXXXXXXXXX 254
           IETAKGFRWLL+R  ++SGSET R K   K      HL  M                   
Sbjct: 185 IETAKGFRWLLTRLNVTSGSETSRDKTKAKVEAFKHHLVVMLVFLLILGLLWGVSGVLMI 244

Query: 255 XDFKNGEKSVVWIGCIVGPFGVWIXXXXXXXXXXXXXXXXXXNWIPFGTLIANVSACCVM 314
            +FKNGE + +WI CIVGP GVWI                  +W+ FGTL ANVSA C+M
Sbjct: 245 AEFKNGENAYLWIACIVGPLGVWIRWLLSRLNGHGLGSRGLLSWMRFGTLTANVSAACIM 304

Query: 315 AALATTKKLVDTRNCDTIITGIQFG 339
           AALATTK  V+TR+CDTI+ GIQFG
Sbjct: 305 AALATTKIYVNTRDCDTIVKGIQFG 329


>Medtr3g072830.1 | camphor resistance CrcB-like protein | HC |
           chr3:32779600-32776698 | 20130731
          Length = 451

 Score =  300 bits (768), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 170/312 (54%), Positives = 201/312 (64%), Gaps = 11/312 (3%)

Query: 37  SSIVPLTSELRS--PLFSNQREGSQDIKHELDKELSKSLHYALCLLHLAVFGILGVLTRY 94
           SS+ PL  +L S  PL ++ R GSQD K E  K L + L Y  C   LAVFGILGV+TRY
Sbjct: 83  SSVRPLPHQLSSTPPLSTDARVGSQDSKFEPSKGLPEFLDYVSCTAQLAVFGILGVITRY 142

Query: 95  ILGLLFGPGIGRVTSDQTILYHDLPSNMVGSFVMGWLGVVFKEDISNVSEYLAIALTTGY 154
           +L  LFGPG+  VTS+ TILY DLPSNM+GSF+MGW GVV+K+DISNVSE+LA+A+TTGY
Sbjct: 143 LLQKLFGPGVANVTSNHTILYLDLPSNMIGSFLMGWFGVVYKKDISNVSEHLAVAITTGY 202

Query: 155 LGSLTTFSGWNQKMLEHSAAGNWLYSVLGYLIGLSLVAFASIISGIETAKGFRWLLSRPK 214
           LGSLTTFSGWNQKMLE SA+G+W+ S LG+LIGL+LVA  SI  GIETAKGFR LL+R  
Sbjct: 203 LGSLTTFSGWNQKMLELSASGHWVISSLGFLIGLALVA-VSIAFGIETAKGFRLLLNRQN 261

Query: 215 MSSGSETGRSKINIKC-----HLEAMXXXXXXXXXXXXXXXXXXXXDFKNGEKSV-VWIG 268
           ++   E G   IN K       L  M                     FK G  +  +W  
Sbjct: 262 ITK-PENGTFMINFKVDSYRRQLTIMMIFLVILGVLWGVSGALVKAKFKRGGSAAELWFA 320

Query: 269 CIVGPFGVWIX-XXXXXXXXXXXXXXXXXNWIPFGTLIANVSACCVMAALATTKKLVDTR 327
           C+VGP GVWI                    WIPFGTLIANVSA C MAAL+T K  V+TR
Sbjct: 321 CMVGPIGVWIRWFLARLNGHGLGKDGLRFKWIPFGTLIANVSAACAMAALSTIKNAVNTR 380

Query: 328 NCDTIITGIQFG 339
           NCDT++ GIQFG
Sbjct: 381 NCDTVVAGIQFG 392


>Medtr3g072840.1 | camphor resistance CrcB-like protein | LC |
           chr3:32784151-32781499 | 20130731
          Length = 444

 Score =  281 bits (720), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 169/333 (50%), Positives = 202/333 (60%), Gaps = 16/333 (4%)

Query: 17  VVKSPGSQKLKPYPGESTSVSSIVPLTSELRSPLF--SNQREGSQDIKH--ELDKELSKS 72
           VV +P  +   P     ++ + IV     L  P+F  +N +   +DIK   ELDK + K 
Sbjct: 65  VVYNPAMEHELP----PSNNNYIVNPQEHLDLPIFVSTNGKVNYEDIKQVLELDK-IPKL 119

Query: 73  LHYALCLLHLAVFGILGVLTRYILGLLFGPGIGRVTSDQTILYHDLPSNMVGSFVMGWLG 132
           L Y  CL HLAVFGILGVLTRY+L   FGPG   VTSD T+ Y DLPSNM+GSF+MGW G
Sbjct: 120 LEYVSCLTHLAVFGILGVLTRYLLQKSFGPGGFGVTSDHTVFYLDLPSNMIGSFLMGWFG 179

Query: 133 VVFKEDISNVSEYLAIALTTGYLGSLTTFSGWNQKMLEHSAAGNWLYSVLGYLIGLSLVA 192
            VFK DIS VSE+LAI LTTGYLGSLTTFSGWNQKMLE   AG+W+ S LG+LIG+ LVA
Sbjct: 180 FVFKRDISCVSEHLAIGLTTGYLGSLTTFSGWNQKMLELGVAGHWILSFLGFLIGMLLVA 239

Query: 193 FASIISGIETAKGFRWLLSRPKMSSGSETGRSKINIKC-----HLEAMXXXXXXXXXXXX 247
             SII G  TAKGF+WLL R  M  GS    SK++ K       L               
Sbjct: 240 L-SIIIGFWTAKGFKWLLKRLNMRHGSGNFISKVSWKVDSFPRQLVVTIVLLVILALLWG 298

Query: 248 XXXXXXXXDFKN-GEKSVVWIGCIVGPFGVWIXXXXXXXXXXXXXXXXXXNWIPFGTLIA 306
                   +FKN G ++ +W+ CIVGP GVW+                   W+ FGTLIA
Sbjct: 299 VSSALEINEFKNGGGEAQLWLACIVGPLGVWLRWFLATRLNECEIGGGFLKWLRFGTLIA 358

Query: 307 NVSACCVMAALATTKKLVDTRNCDTIITGIQFG 339
           N SA C+MAALAT KK V+T NCDT+ITG+QFG
Sbjct: 359 NFSAACIMAALATLKKSVNTTNCDTVITGLQFG 391