Miyakogusa Predicted Gene

Lj3g3v0797560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0797560.1 tr|Q5I6E1|Q5I6E1_VOLCA Arsenite-resistance
protein OS=Volvox carteri f. nagariensis PE=2
SV=1,23.02,2e-18,DUF3546,Protein of unknown function DUF3546;
ARS2,Arsenite-resistance protein 2; SUBFAMILY NOT NAMED,CUFF.41739.1
         (550 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g006760.1 | serrate RNA effector molecule-like protein | H...   772   0.0  
Medtr8g043980.1 | serrate RNA effector molecule-like protein | H...   717   0.0  
Medtr3g006760.2 | serrate RNA effector molecule-like protein | H...   602   e-172
Medtr2g084355.1 | serrate RNA effector molecule-like protein, pu...   255   7e-68

>Medtr3g006760.1 | serrate RNA effector molecule-like protein | HC |
           chr3:850770-843225 | 20130731
          Length = 704

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/549 (73%), Positives = 437/549 (79%), Gaps = 7/549 (1%)

Query: 2   NRGYSDLPSGGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHK 61
           NRGY+DLPSGGA+REGLMSYKQFIQELEDD+LP+EAERRYQEYKSEYI+TQKRAYFN HK
Sbjct: 163 NRGYADLPSGGARREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNTHK 222

Query: 62  DEEWLKDKYHPTNLLTVIERRNENARRVAKDFLLDLQSGTLDLNPGLNSSPPNKSGQASE 121
           D EWLKDKYHPTNLLTVIERRNENARR+AK+FLLDLQSGTLD+NPGLNS+   KS QA+E
Sbjct: 223 DAEWLKDKYHPTNLLTVIERRNENARRLAKEFLLDLQSGTLDINPGLNSAS-TKSEQATE 281

Query: 122 GNSEEETDASGKRRRHGRGSNNDNDFSAAPKAHPISSEXXXXXXXXXXXXXVVRKLDIEK 181
            NSEEETDA GKRRRHGRGSN DNDFSAAPKAHP+SSE             VVRKLD EK
Sbjct: 282 PNSEEETDAGGKRRRHGRGSNKDNDFSAAPKAHPVSSEPRRIQEDIHQVQAVVRKLDKEK 341

Query: 182 GIEDNILYTSDQSKNDDKAHSGSVGPIVIIRGLASVKGLEGVELLDTLITYLWRIHGIDY 241
           GIEDNIL T+D SKN DKA SGSVGP+VIIRGL S+KGLEGVELLDTLITYLWRIHG+DY
Sbjct: 342 GIEDNILCTNDHSKNSDKARSGSVGPVVIIRGLTSIKGLEGVELLDTLITYLWRIHGVDY 401

Query: 242 YGMVETNEAKGFRHVRPDGTGHEEASKSGPEWEKKLDSFWQGRLNGQDPLDVMTAKEKID 301
           YGM+ET++AKGFRHVRP+G  HEE +KSG EWEKKLDSFWQ RL+G DPL+V TAKEKID
Sbjct: 402 YGMLETSDAKGFRHVRPEGARHEETAKSGSEWEKKLDSFWQRRLDGLDPLEVRTAKEKID 461

Query: 302 AAATDFLDPHVRKIRDEKYGWKYGCGAKGCTKLFHASEFVXXXXXXXXXXXXXXXTAKLR 361
           AAA D LDP+VRKIRDEKYGWKYGCGAK CTKLFHA EFV               T+KLR
Sbjct: 462 AAAADMLDPYVRKIRDEKYGWKYGCGAKSCTKLFHAVEFVYKHLKLKHPELVLELTSKLR 521

Query: 362 EDLYFQNYMNDSNAPGGTPIMQQPQXXXXXXXXXXXXXXXXXXGSRRDMDKSDRINGDRP 421
           EDLYFQNYMND +APGGTP+MQQ Q                  G+RRD D+SDR NGDRP
Sbjct: 522 EDLYFQNYMNDPDAPGGTPVMQQSQ-DKPLKRRLLEGRLKDDRGNRRDQDRSDRTNGDRP 580

Query: 422 DNSPSRERQRGNHDEGEAMYDSYGGPAVXXXXXXXXXXXXXXXXXXXXXXXXXFVPAPPE 481
           D+SPS ERQ GN D  E M+D+YGGPAV                         FVPAPPE
Sbjct: 581 DSSPSHERQLGNRD--ETMFDAYGGPAV--SFNSDMPPPPVLMPVPGAGPLGPFVPAPPE 636

Query: 482 VAMQMFRDQGGPSSYDPSGMNMRSGPHMGGPAPIMAVPPGFRPDPRRMRSYQDLDAPEDE 541
           VAMQMFRDQ GPSSYDPSGM MRSGPH+GG A ++AVPP FRPDPRRMRSYQDLDAPE+E
Sbjct: 637 VAMQMFRDQ-GPSSYDPSGMTMRSGPHIGGQASMIAVPPTFRPDPRRMRSYQDLDAPEEE 695

Query: 542 VTVIDYRSL 550
           VTVIDYRSL
Sbjct: 696 VTVIDYRSL 704


>Medtr8g043980.1 | serrate RNA effector molecule-like protein | HC |
           chr8:16823584-16831186 | 20130731
          Length = 746

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/557 (67%), Positives = 416/557 (74%), Gaps = 33/557 (5%)

Query: 2   NRGYSDLPSGGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHK 61
           NRGY+DLPSGG QREGLMSYKQFIQELEDD+LP EAERRYQEYKSEYISTQKRAYF+AHK
Sbjct: 215 NRGYADLPSGGGQREGLMSYKQFIQELEDDILPTEAERRYQEYKSEYISTQKRAYFSAHK 274

Query: 62  DEEWLKDKYHPTNLLTVIERRNENARRVAKDFLLDLQSGTLDLNPGLNSSPPNKSGQASE 121
           DEEWLKDKYHPTNLLTVIERRNE+AR++AKDFLLDLQSGTLD NPGL++S  +KSGQASE
Sbjct: 275 DEEWLKDKYHPTNLLTVIERRNESARQLAKDFLLDLQSGTLDPNPGLSASLSSKSGQASE 334

Query: 122 GNSEEETDASGKRRRHGRGSNNDNDFSAAPKAHPISSEXXXXXXXXXXXXXVVRKLDIEK 181
            NSEEE  A  +RRR G GSN  +DFSAAPKAHP+SSE             +VRKLD EK
Sbjct: 335 PNSEEE--AEDQRRRDGWGSNKKSDFSAAPKAHPVSSEPRRIQADVQQAQALVRKLDTEK 392

Query: 182 GIEDNILYTSDQSKNDDKAHSGSVGPIVIIRGLASVKGLEGVELLDTLITYLWRIHGIDY 241
            I DNIL +                  +IIRGL SVKGLEGVELLDTLITYLWRIHG+DY
Sbjct: 393 RIGDNILCS------------------IIIRGLTSVKGLEGVELLDTLITYLWRIHGVDY 434

Query: 242 YGMVETNEAKGFRHVRPDGTGHEEASKSGPEWEKKLDSFWQGRLNGQDPLDVMTAKEKID 301
           YGM+ETNEAKGFRHVRP+  GHEE  KSG EWEKKLDSFWQGRLNGQDPL+V+ AKEK+D
Sbjct: 435 YGMIETNEAKGFRHVRPERKGHEETGKSGSEWEKKLDSFWQGRLNGQDPLEVLAAKEKMD 494

Query: 302 AAATDFLDPHVRKIRDEKYGWKYGCGAKGCTKLFHASEFVXXXXXXXXXXXXXXXTAKLR 361
           AAA + LDP+VRKIRDEKYGWKYGCGAKGCTKLFHA+EFV               T+KLR
Sbjct: 495 AAAIEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELALEQTSKLR 554

Query: 362 EDLYFQNYMNDSNAPGGTPIMQQPQXXXXXXXXXX--XXXXXXXXGSRRDMDKSDRINGD 419
           EDLY QNYMND +APGG P+MQQPQ                    G+RRD ++ DR+NGD
Sbjct: 555 EDLYTQNYMNDPDAPGGKPVMQQPQKDNRPLNQRLGFEGRLRDDRGNRRDHERYDRMNGD 614

Query: 420 RPDNSPSRERQR-----GNHDEGEAMYDSYGGPAVXXXXXXXXXXXXXXXXXXXXXXXXX 474
           R  NSPSRERQ      GNHD  E M D++ GP V                         
Sbjct: 615 RA-NSPSRERQSKALEMGNHD--ETMQDTFAGPGV--PPFSSDIPPPVLMPVPGAGPLGP 669

Query: 475 FVPAPPEVAMQMFRDQGGPSSYDPSGMNMRSGP-HMGGPAPIMAVPPGFRPDPRRMRSYQ 533
           FVPAPPEVAMQMFRDQGGPSS+D SG+NM SGP HMGGPAPI+ +PPGFRPDPR+MRSYQ
Sbjct: 670 FVPAPPEVAMQMFRDQGGPSSFDGSGINMLSGPHHMGGPAPIITLPPGFRPDPRKMRSYQ 729

Query: 534 DLDAPEDEVTVIDYRSL 550
           DLDAP++EVTVIDYRSL
Sbjct: 730 DLDAPDEEVTVIDYRSL 746


>Medtr3g006760.2 | serrate RNA effector molecule-like protein | HC |
           chr3:850762-844755 | 20130731
          Length = 591

 Score =  602 bits (1553), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 303/385 (78%), Positives = 329/385 (85%), Gaps = 1/385 (0%)

Query: 2   NRGYSDLPSGGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHK 61
           NRGY+DLPSGGA+REGLMSYKQFIQELEDD+LP+EAERRYQEYKSEYI+TQKRAYFN HK
Sbjct: 163 NRGYADLPSGGARREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNTHK 222

Query: 62  DEEWLKDKYHPTNLLTVIERRNENARRVAKDFLLDLQSGTLDLNPGLNSSPPNKSGQASE 121
           D EWLKDKYHPTNLLTVIERRNENARR+AK+FLLDLQSGTLD+NPGLNS+   KS QA+E
Sbjct: 223 DAEWLKDKYHPTNLLTVIERRNENARRLAKEFLLDLQSGTLDINPGLNSAS-TKSEQATE 281

Query: 122 GNSEEETDASGKRRRHGRGSNNDNDFSAAPKAHPISSEXXXXXXXXXXXXXVVRKLDIEK 181
            NSEEETDA GKRRRHGRGSN DNDFSAAPKAHP+SSE             VVRKLD EK
Sbjct: 282 PNSEEETDAGGKRRRHGRGSNKDNDFSAAPKAHPVSSEPRRIQEDIHQVQAVVRKLDKEK 341

Query: 182 GIEDNILYTSDQSKNDDKAHSGSVGPIVIIRGLASVKGLEGVELLDTLITYLWRIHGIDY 241
           GIEDNIL T+D SKN DKA SGSVGP+VIIRGL S+KGLEGVELLDTLITYLWRIHG+DY
Sbjct: 342 GIEDNILCTNDHSKNSDKARSGSVGPVVIIRGLTSIKGLEGVELLDTLITYLWRIHGVDY 401

Query: 242 YGMVETNEAKGFRHVRPDGTGHEEASKSGPEWEKKLDSFWQGRLNGQDPLDVMTAKEKID 301
           YGM+ET++AKGFRHVRP+G  HEE +KSG EWEKKLDSFWQ RL+G DPL+V TAKEKID
Sbjct: 402 YGMLETSDAKGFRHVRPEGARHEETAKSGSEWEKKLDSFWQRRLDGLDPLEVRTAKEKID 461

Query: 302 AAATDFLDPHVRKIRDEKYGWKYGCGAKGCTKLFHASEFVXXXXXXXXXXXXXXXTAKLR 361
           AAA D LDP+VRKIRDEKYGWKYGCGAK CTKLFHA EFV               T+KLR
Sbjct: 462 AAAADMLDPYVRKIRDEKYGWKYGCGAKSCTKLFHAVEFVYKHLKLKHPELVLELTSKLR 521

Query: 362 EDLYFQNYMNDSNAPGGTPIMQQPQ 386
           EDLYFQNYMND +APGGTP+MQQ Q
Sbjct: 522 EDLYFQNYMNDPDAPGGTPVMQQSQ 546


>Medtr2g084355.1 | serrate RNA effector molecule-like protein,
           putative | HC | chr2:35534449-35532317 | 20130731
          Length = 248

 Score =  255 bits (652), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 125/197 (63%), Positives = 138/197 (70%), Gaps = 26/197 (13%)

Query: 190 TSDQSKNDDKAHSGSVGPIVIIRGLASVKGLEGVELLDTLITYLWRIHGIDYYGMVETNE 249
           +SD +K DDK+H+GSVGP VIIRGL   KGLEGVELLDTLITYLWRIHG+DYYGM+ETNE
Sbjct: 7   SSDHNKTDDKSHNGSVGPTVIIRGLTYFKGLEGVELLDTLITYLWRIHGVDYYGMIETNE 66

Query: 250 AKGFRHVRPDGTGHEEASKSGPEWEKKLDSFWQGRLNGQDPLDVMTAKEKIDAAATDFLD 309
           AKGFRHVRP+ TGHEE                           VM AKE IDAAA + LD
Sbjct: 67  AKGFRHVRPERTGHEET--------------------------VMAAKENIDAAAIEVLD 100

Query: 310 PHVRKIRDEKYGWKYGCGAKGCTKLFHASEFVXXXXXXXXXXXXXXXTAKLREDLYFQNY 369
           P VRKIRDEKYGWKY CGAKGCTKLFHA+E V               T+KLREDLY QNY
Sbjct: 101 PSVRKIRDEKYGWKYVCGAKGCTKLFHAAEVVYKHLKLKHLELALEQTSKLREDLYTQNY 160

Query: 370 MNDSNAPGGTPIMQQPQ 386
           +ND +APGG P+MQQPQ
Sbjct: 161 INDPDAPGGKPVMQQPQ 177