Miyakogusa Predicted Gene
- Lj3g3v0797530.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0797530.1 tr|G7K2Z2|G7K2Z2_MEDTR Protein argonaute 4A
OS=Medicago truncatula GN=MTR_5g087890 PE=4
SV=1,54.44,2e-19,PAZ,Argonaute/Dicer protein, PAZ; SUBFAMILY NOT
NAMED,NULL; EUKARYOTIC TRANSLATION INITIATION FACTOR,CUFF.41415.1
(95 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g010650.1 | eukaryotic translation initiation factor 2c, p... 135 7e-33
Medtr6g043180.1 | eukaryotic translation initiation factor 2c, p... 107 3e-24
Medtr5g087870.2 | eukaryotic translation initiation factor 2c, p... 106 5e-24
Medtr5g087870.1 | eukaryotic translation initiation factor 2c, p... 106 5e-24
Medtr5g087890.1 | eukaryotic translation initiation factor 2c, p... 106 6e-24
Medtr3g078647.1 | eukaryotic translation initiation factor 2c, p... 104 2e-23
Medtr3g083300.2 | eukaryotic translation initiation factor 2c, p... 91 2e-19
Medtr3g083300.3 | eukaryotic translation initiation factor 2c, p... 91 2e-19
Medtr3g083300.1 | eukaryotic translation initiation factor 2c, p... 91 2e-19
Medtr7g107230.1 | PAZ domain protein | LC | chr7:43723935-437206... 59 1e-09
>Medtr3g010650.1 | eukaryotic translation initiation factor 2c,
putative | LC | chr3:2517864-2524038 | 20130731
Length = 876
Score = 135 bits (341), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 71/84 (84%)
Query: 1 MLKNLRVKANNMEYKIIGLSEKPCRTQTFSLRHGKDANGEVQSSEITVYDYFKHNKKIEL 60
MLKNLR+KANN + KI GLSEK C TQ F +HG DANGEVQSSEIT+Y+YFK +KKIEL
Sbjct: 271 MLKNLRIKANNTQRKITGLSEKSCMTQNFLFKHGNDANGEVQSSEITIYEYFKRHKKIEL 330
Query: 61 RYSADMPCINVGKPKRPSYFPVEV 84
YS DMPCINVGKPKRP Y+P+E+
Sbjct: 331 CYSVDMPCINVGKPKRPIYYPMEL 354
>Medtr6g043180.1 | eukaryotic translation initiation factor 2c,
putative | HC | chr6:14913981-14920303 | 20130731
Length = 903
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 2 LKNLRVKA--NNMEYKIIGLSEKPCRTQTFSLRHGKDANGEVQSSEITVYDYFKHNKKIE 59
LKNLR+ +N E+KI GLSE+PC+ Q F+L+ A GE S EIT+Y+YF + +KI
Sbjct: 301 LKNLRITTMPSNQEFKITGLSERPCKDQLFTLKKRGAAPGEDDSEEITIYEYFVNRRKIP 360
Query: 60 LRYSADMPCINVGKPKRPSYFPVEV 84
L+YSA +PCINVGKPKRP+YFP+E+
Sbjct: 361 LKYSARLPCINVGKPKRPTYFPIEL 385
>Medtr5g087870.2 | eukaryotic translation initiation factor 2c,
putative | HC | chr5:38109974-38119293 | 20130731
Length = 926
Score = 106 bits (265), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 2 LKNLRVKAN--NMEYKIIGLSEKPCRTQTFSLRHGKDANGEVQSSEITVYDYFKHNKKIE 59
LKNLR+ + N EYKI GLSE PC+ Q F+L+ GE + EITVYDYF + +KI
Sbjct: 342 LKNLRITTSPTNQEYKITGLSEMPCKDQLFTLKKRGAVPGEDDTEEITVYDYFVNRRKIS 401
Query: 60 LRYSADMPCINVGKPKRPSYFPVEV 84
L+YSAD+PCINVGKPKRP++ PVE+
Sbjct: 402 LQYSADLPCINVGKPKRPTFVPVEL 426
>Medtr5g087870.1 | eukaryotic translation initiation factor 2c,
putative | HC | chr5:38109974-38119294 | 20130731
Length = 948
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 2 LKNLRVKAN--NMEYKIIGLSEKPCRTQTFSLRHGKDANGEVQSSEITVYDYFKHNKKIE 59
LKNLR+ + N EYKI GLSE PC+ Q F+L+ GE + EITVYDYF + +KI
Sbjct: 342 LKNLRITTSPTNQEYKITGLSEMPCKDQLFTLKKRGAVPGEDDTEEITVYDYFVNRRKIS 401
Query: 60 LRYSADMPCINVGKPKRPSYFPVEV 84
L+YSAD+PCINVGKPKRP++ PVE+
Sbjct: 402 LQYSADLPCINVGKPKRPTFVPVEL 426
>Medtr5g087890.1 | eukaryotic translation initiation factor 2c,
putative | HC | chr5:38121608-38127605 | 20130731
Length = 892
Score = 106 bits (264), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 2 LKNLRVKA--NNMEYKIIGLSEKPCRTQTFSLRHGKDANGEVQSSEITVYDYFKHNKKIE 59
LKNLR+ A +N EYKI GLSE C+ Q F+++ GE + EITVYDYF H +KI+
Sbjct: 292 LKNLRITAKPSNQEYKITGLSELSCKDQLFTMKKRGAVAGEDDTEEITVYDYFVHRRKID 351
Query: 60 LRYSADMPCINVGKPKRPSYFPVEV 84
L+YSA +PCINVGKPKRP+Y P+E+
Sbjct: 352 LQYSAGLPCINVGKPKRPTYIPIEL 376
>Medtr3g078647.1 | eukaryotic translation initiation factor 2c,
putative | HC | chr3:35462504-35470692 | 20130731
Length = 923
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%), Gaps = 6/85 (7%)
Query: 2 LKNLRVKA--NNMEYKIIGLSEKPCRTQTFSLRHGKDANGEVQSSEITVYDYFKHNKKIE 59
LKNLRVK +N E+KI GLSE PC+ TF+L+ +D +G + E+TV DYF + +KI+
Sbjct: 321 LKNLRVKTHPSNQEWKICGLSEVPCKELTFTLKK-RDGDG---TDEMTVLDYFTNVRKID 376
Query: 60 LRYSADMPCINVGKPKRPSYFPVEV 84
LRYSAD+PCINVG+PKRP+YFP+E+
Sbjct: 377 LRYSADLPCINVGRPKRPTYFPIEL 401
>Medtr3g083300.2 | eukaryotic translation initiation factor 2c,
putative | HC | chr3:37597691-37589775 | 20130731
Length = 909
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 64/88 (72%), Gaps = 5/88 (5%)
Query: 1 MLKNLRVKAN--NMEYKIIGLSEKPCRTQTFSLRH--GKDANGEVQSSEITVYDYFKHNK 56
+LKNLRV+A N E+KI G+SEKPC Q FS++ G+D N E Q+ +ITVY+YF ++
Sbjct: 297 ILKNLRVRATHRNQEFKISGMSEKPCIQQLFSMKMKIGEDNNTE-QTVDITVYEYFAKHR 355
Query: 57 KIELRYSADMPCINVGKPKRPSYFPVEV 84
IEL SA PC++VGKP RP++ P+E+
Sbjct: 356 GIELTSSAYFPCLDVGKPNRPNFLPLEL 383
>Medtr3g083300.3 | eukaryotic translation initiation factor 2c,
putative | HC | chr3:37598985-37589775 | 20130731
Length = 909
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 64/88 (72%), Gaps = 5/88 (5%)
Query: 1 MLKNLRVKAN--NMEYKIIGLSEKPCRTQTFSLRH--GKDANGEVQSSEITVYDYFKHNK 56
+LKNLRV+A N E+KI G+SEKPC Q FS++ G+D N E Q+ +ITVY+YF ++
Sbjct: 297 ILKNLRVRATHRNQEFKISGMSEKPCIQQLFSMKMKIGEDNNTE-QTVDITVYEYFAKHR 355
Query: 57 KIELRYSADMPCINVGKPKRPSYFPVEV 84
IEL SA PC++VGKP RP++ P+E+
Sbjct: 356 GIELTSSAYFPCLDVGKPNRPNFLPLEL 383
>Medtr3g083300.1 | eukaryotic translation initiation factor 2c,
putative | HC | chr3:37598985-37589775 | 20130731
Length = 909
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 64/88 (72%), Gaps = 5/88 (5%)
Query: 1 MLKNLRVKAN--NMEYKIIGLSEKPCRTQTFSLRH--GKDANGEVQSSEITVYDYFKHNK 56
+LKNLRV+A N E+KI G+SEKPC Q FS++ G+D N E Q+ +ITVY+YF ++
Sbjct: 297 ILKNLRVRATHRNQEFKISGMSEKPCIQQLFSMKMKIGEDNNTE-QTVDITVYEYFAKHR 355
Query: 57 KIELRYSADMPCINVGKPKRPSYFPVEV 84
IEL SA PC++VGKP RP++ P+E+
Sbjct: 356 GIELTSSAYFPCLDVGKPNRPNFLPLEL 383
>Medtr7g107230.1 | PAZ domain protein | LC | chr7:43723935-43720626
| 20130731
Length = 258
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 48 VYDYFKHNKKIELRYSADMPCINVGKPKRPSYFPVEVTK 86
VYDYF + +KI L YSAD+PCINV KPKRP+Y +E K
Sbjct: 92 VYDYFDNQRKIALHYSADLPCINVRKPKRPTYVLIEALK 130