Miyakogusa Predicted Gene
- Lj3g3v0766060.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0766060.1 Non Characterized Hit- tr|I0Z1S1|I0Z1S1_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,29.81,3e-18,Transglut_core2,NULL; seg,NULL,CUFF.41376.1
(366 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g014680.1 | transglutaminase family protein | HC | chr3:42... 538 e-153
>Medtr3g014680.1 | transglutaminase family protein | HC |
chr3:4217003-4210793 | 20130731
Length = 422
Score = 538 bits (1385), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/334 (77%), Positives = 278/334 (83%)
Query: 33 RVMCCGGSNSQPAATDYKFVLHDALDSSGIDTTHAREARVEFCSQIQKFTGIEKQTSICI 92
RV+C GGSN Q ATD KF LHDALD+SGIDT HAREAR FCSQI++ T IEK+TSICI
Sbjct: 34 RVICHGGSNVQHVATDLKFFLHDALDASGIDTAHAREAREGFCSQIKRLTDIEKETSICI 93
Query: 93 NRSVDLGRTALYIAAEXXXXXXXXXXXXXXXAFIVRLDDLSMDYCPHYSPKYDSSPEKFL 152
NR VDLGRTALYIAAE AF+ RLDDLSMDYCPHY+P YDSSPEKFL
Sbjct: 94 NRHVDLGRTALYIAAEDDSLVSHSSVPLPVDAFVARLDDLSMDYCPHYTPSYDSSPEKFL 153
Query: 153 ESIERFLYVHKGFKRTDANLLEPRSLYLHSVLTHRSGSAAMLSLIYSEILKMLRLWGLLY 212
ESIERFLYVHKGF+RT ANLLEP++LYLHSVLTHRSGS AMLSLIYSEILKMLRLWGLLY
Sbjct: 154 ESIERFLYVHKGFRRTSANLLEPQALYLHSVLTHRSGSPAMLSLIYSEILKMLRLWGLLY 213
Query: 213 FDAEIFFPHDFLTLPKGYNKQKSKESDQAHIMTSGNLLVEILNNLKHAFWPFQHDYTKTL 272
FDAEIF+PHD +PKGY+K KSKESDQAHIMTSGNLLVEILNNLKHAFWPF HD++KTL
Sbjct: 214 FDAEIFYPHDIFNVPKGYHKLKSKESDQAHIMTSGNLLVEILNNLKHAFWPFHHDHSKTL 273
Query: 273 FLRAAHAADCVDRSAFVGEXXXXXXXXXXXXHRLDRGVWTNACFGDMRRSLSACERLILL 332
FLRAAHAA+CVDRS FVGE HRLDRGVWT FGDMRRSLSACERLILL
Sbjct: 274 FLRAAHAANCVDRSDFVGESGSQIASAKAARHRLDRGVWTTVRFGDMRRSLSACERLILL 333
Query: 333 TNDANELRDYSILLYHCGLYEQSFQYLKKYRELK 366
TND NELRDYSILLYHCGLYE+S QYL KY+E K
Sbjct: 334 TNDPNELRDYSILLYHCGLYEESLQYLTKYQEHK 367