Miyakogusa Predicted Gene

Lj3g3v0766030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0766030.1 Non Characterized Hit- tr|I3T5K4|I3T5K4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,90.7,0.000000000000004, ,CUFF.41349.1
         (99 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g106690.1 | PAP fibrillin domain protein,expressed protein...   184   1e-47

>Medtr8g106690.1 | PAP fibrillin domain protein,expressed protein |
           HC | chr8:45034141-45031608 | 20130731
          Length = 232

 Score =  184 bits (468), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 85/98 (86%), Positives = 93/98 (94%)

Query: 2   NSYAKRIENGVYLGPIGQLTFEGRLSWKNRILAFIFENLRIKIGPLKPLQISLGKKEDAE 61
           ++ AKRIENGV+LGPIGQLTFEGRLSWKNRIL+FIFENLRIK+GPLKPLQISLG+KED E
Sbjct: 135 DAAAKRIENGVFLGPIGQLTFEGRLSWKNRILSFIFENLRIKVGPLKPLQISLGQKEDRE 194

Query: 62  PNTKSPFFIWFYVDEEIAVARGHSGGTAFWCRSRQVNI 99
           P+TK PFFIWFYVDEEIAVARG SGGTAFWCR RQV+I
Sbjct: 195 PSTKDPFFIWFYVDEEIAVARGRSGGTAFWCRCRQVDI 232