Miyakogusa Predicted Gene

Lj3g3v0743580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0743580.1 Non Characterized Hit- tr|I1LYK6|I1LYK6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35918
PE,92.57,0,Prefoldin,Prefoldin; coiled-coil,NULL; PREFOLDIN SUBUNIT
2,NULL; no description,NULL; Prefoldin_2,Pr,CUFF.41708.1
         (185 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g007250.1 | prefoldin | HC | chr3:943460-948529 | 20130731      257   3e-69
Medtr3g007250.2 | prefoldin | HC | chr3:946036-948529 | 20130731      257   3e-69

>Medtr3g007250.1 | prefoldin | HC | chr3:943460-948529 | 20130731
          Length = 147

 Score =  257 bits (657), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 125/139 (89%), Positives = 134/139 (96%)

Query: 47  KEPVNEQAVANTYAAMRSELNQYYSKITELEMEVSEHTLVLNAIQPLDQSRRCYRMIGGV 106
           KEPVNEQAVAN YAAMRS+LNQ Y+KITELEMEVSEH+LVLNAIQPLDQSRRCYRMIGGV
Sbjct: 9   KEPVNEQAVANMYAAMRSDLNQIYTKITELEMEVSEHSLVLNAIQPLDQSRRCYRMIGGV 68

Query: 107 LVERTIKEVMPAVQRNKEGLEEVVARLNEALEKKKKEISDFEAKYKIRIRKADAEVKDES 166
           LVERTIKEV+PAVQRNKEGLEEVVARLNE LEKKK+EI++FE KYKIR+RKADAEV DES
Sbjct: 69  LVERTIKEVLPAVQRNKEGLEEVVARLNETLEKKKREIAEFETKYKIRMRKADAEVNDES 128

Query: 167 GRKEGSAQGVLVGPAGGSE 185
           G+KEGSAQGVLVGPAGGSE
Sbjct: 129 GKKEGSAQGVLVGPAGGSE 147


>Medtr3g007250.2 | prefoldin | HC | chr3:946036-948529 | 20130731
          Length = 147

 Score =  257 bits (657), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 125/139 (89%), Positives = 134/139 (96%)

Query: 47  KEPVNEQAVANTYAAMRSELNQYYSKITELEMEVSEHTLVLNAIQPLDQSRRCYRMIGGV 106
           KEPVNEQAVAN YAAMRS+LNQ Y+KITELEMEVSEH+LVLNAIQPLDQSRRCYRMIGGV
Sbjct: 9   KEPVNEQAVANMYAAMRSDLNQIYTKITELEMEVSEHSLVLNAIQPLDQSRRCYRMIGGV 68

Query: 107 LVERTIKEVMPAVQRNKEGLEEVVARLNEALEKKKKEISDFEAKYKIRIRKADAEVKDES 166
           LVERTIKEV+PAVQRNKEGLEEVVARLNE LEKKK+EI++FE KYKIR+RKADAEV DES
Sbjct: 69  LVERTIKEVLPAVQRNKEGLEEVVARLNETLEKKKREIAEFETKYKIRMRKADAEVNDES 128

Query: 167 GRKEGSAQGVLVGPAGGSE 185
           G+KEGSAQGVLVGPAGGSE
Sbjct: 129 GKKEGSAQGVLVGPAGGSE 147