Miyakogusa Predicted Gene

Lj3g3v0730090.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0730090.2 Non Characterized Hit- tr|I1JDX6|I1JDX6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30275
PE,79.69,0,UDP-Glycosyltransferase/glycogen phosphorylase,NULL;
LIPID-A-DISACCHARIDE SYNTHASE,NULL; LpxB,Glycos,CUFF.41222.2
         (317 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g012965.1 | lipid-A-disaccharide synthase | HC | chr8:3955...   502   e-142

>Medtr8g012965.1 | lipid-A-disaccharide synthase | HC |
           chr8:3955086-3951009 | 20130731
          Length = 477

 Score =  502 bits (1292), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 241/317 (76%), Positives = 268/317 (84%), Gaps = 7/317 (2%)

Query: 7   LLRRKWKLSS-------VTVQLQRFSSSRTAPIDMAANDGELRVFLVAGEVSGDSIASRL 59
           LLR KWKL+S        +       +   AP+DMAA DGE RVF+VAGEVSGDSIASRL
Sbjct: 9   LLRTKWKLNSPNTLLTFSSSFSSSHHAKFKAPMDMAARDGEFRVFVVAGEVSGDSIASRL 68

Query: 60  MASLKLLSPLPLRFAGLGGARMASEGLQSLFPMEDISVMGIWELLPHLYRIRVRLNETLE 119
           MASLKLLSP P+RF+G+GG +M SEGL+SLFP+EDISVMGIWELLPHLY I+VRLNE ++
Sbjct: 69  MASLKLLSPFPVRFSGIGGTKMTSEGLKSLFPIEDISVMGIWELLPHLYTIKVRLNEAVK 128

Query: 120 AAALFNPHVVVTVDSKGFSFRFLKQLRARYNQEKLHPPAHVHYVAPSFWAWKGGEARLRG 179
           AA+LF PHVV+TVDSKGFSFRFLKQLRARY+Q+KLH PAH HYVAPSFWAWKGGE RL G
Sbjct: 129 AASLFEPHVVLTVDSKGFSFRFLKQLRARYSQQKLHSPAHFHYVAPSFWAWKGGEERLGG 188

Query: 180 LAEFVDHLLCILPNEDRICRLNGLSATFVGHPVLEDVLDLNLRNNLSVNEWRAEGNGKDF 239
           LAEFVDHL CILPNED+ICRLNGLSATFVGHPV EDV++LN R N S NEWRAEGNG+DF
Sbjct: 189 LAEFVDHLFCILPNEDKICRLNGLSATFVGHPVFEDVMELNSRTNCSNNEWRAEGNGEDF 248

Query: 240 CIKHGVPSGATVISLLPGSRAQEVSRMLPIFANTMELLKDDVPQLMAIIHVAPNEHVEGL 299
             KH VP G TVISLLPGSR QEVSRMLPIFANTMELLKD+VPQLM +IHVAPN+ VE  
Sbjct: 249 LGKHEVPPGTTVISLLPGSRVQEVSRMLPIFANTMELLKDNVPQLMTVIHVAPNQDVENF 308

Query: 300 IASSVRRWPVPVVLIPG 316
           IA +V+RWPVP VLIPG
Sbjct: 309 IAGAVQRWPVPAVLIPG 325