Miyakogusa Predicted Gene

Lj3g3v0719980.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0719980.2 tr|B9GQL6|B9GQL6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_756296 PE=4
SV=1,62.34,1e-17,DNA-binding domain in plant proteins such as,AP2/ERF
domain; seg,NULL; DNA-binding domain,DNA-bindin,CUFF.41213.2
         (234 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g012655.2 | ethylene response factor | HC | chr8:3722232-3...   243   8e-65
Medtr8g012655.1 | ethylene response factor | HC | chr8:3721647-3...   243   8e-65
Medtr7g055857.1 | ethylene response factor | HC | chr7:19252386-...   183   1e-46
Medtr7g055857.2 | ethylene response factor | HC | chr7:19252386-...   183   1e-46

>Medtr8g012655.2 | ethylene response factor | HC |
           chr8:3722232-3726436 | 20130731
          Length = 243

 Score =  243 bits (621), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 133/241 (55%), Positives = 146/241 (60%), Gaps = 9/241 (3%)

Query: 1   MVSXXXXXXXXXCSGDNSFVTPLPLYCENLAGDENSSQHGKPKRQSEQAVLSDIASVLDS 60
           MVS         CSG+NSFVTPLPLYCENLA  E SSQ+  PK  SEQ+++ DI SV DS
Sbjct: 1   MVSLRRRRLLGLCSGNNSFVTPLPLYCENLARYEISSQNANPK--SEQSMVLDITSVRDS 58

Query: 61  -------NTIVKDEXXXXXXXXXXXXXXXXXXXXXXXXXXRRKRHSRKPIHNQEPCLMRG 113
                  NT VKDE                          RRKRHSRKP  NQEPC+MRG
Sbjct: 59  VGTQDSQNTAVKDESGSSDVSGSNLSKEQPSQQSIGPPVKRRKRHSRKPRENQEPCVMRG 118

Query: 114 VYFKNMKWQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGXXXXXXXXXXXXXXXXXX 173
           VYFKNMKWQAAIKVDKKQIHLGTVASQEEAA LYDRAAFMCG                  
Sbjct: 119 VYFKNMKWQAAIKVDKKQIHLGTVASQEEAARLYDRAAFMCGREPNFELSEEEKLELSKF 178

Query: 174 XXXXXLAMTRQAITSKKHKGRHSPGPRNRIEEPSLHIGDSKSKQVANDFSGSGYAEQETA 233
                LA+TRQ+IT KKHK  HSPGP N ++EPS+H GD  SKQ   DF  +G  EQET 
Sbjct: 179 KWEEFLAVTRQSITCKKHKKSHSPGPVNMVDEPSIHRGDCDSKQGVTDFPVNGEPEQETT 238

Query: 234 I 234
           +
Sbjct: 239 V 239


>Medtr8g012655.1 | ethylene response factor | HC |
           chr8:3721647-3726436 | 20130731
          Length = 243

 Score =  243 bits (621), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 133/241 (55%), Positives = 146/241 (60%), Gaps = 9/241 (3%)

Query: 1   MVSXXXXXXXXXCSGDNSFVTPLPLYCENLAGDENSSQHGKPKRQSEQAVLSDIASVLDS 60
           MVS         CSG+NSFVTPLPLYCENLA  E SSQ+  PK  SEQ+++ DI SV DS
Sbjct: 1   MVSLRRRRLLGLCSGNNSFVTPLPLYCENLARYEISSQNANPK--SEQSMVLDITSVRDS 58

Query: 61  -------NTIVKDEXXXXXXXXXXXXXXXXXXXXXXXXXXRRKRHSRKPIHNQEPCLMRG 113
                  NT VKDE                          RRKRHSRKP  NQEPC+MRG
Sbjct: 59  VGTQDSQNTAVKDESGSSDVSGSNLSKEQPSQQSIGPPVKRRKRHSRKPRENQEPCVMRG 118

Query: 114 VYFKNMKWQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGXXXXXXXXXXXXXXXXXX 173
           VYFKNMKWQAAIKVDKKQIHLGTVASQEEAA LYDRAAFMCG                  
Sbjct: 119 VYFKNMKWQAAIKVDKKQIHLGTVASQEEAARLYDRAAFMCGREPNFELSEEEKLELSKF 178

Query: 174 XXXXXLAMTRQAITSKKHKGRHSPGPRNRIEEPSLHIGDSKSKQVANDFSGSGYAEQETA 233
                LA+TRQ+IT KKHK  HSPGP N ++EPS+H GD  SKQ   DF  +G  EQET 
Sbjct: 179 KWEEFLAVTRQSITCKKHKKSHSPGPVNMVDEPSIHRGDCDSKQGVTDFPVNGEPEQETT 238

Query: 234 I 234
           +
Sbjct: 239 V 239


>Medtr7g055857.1 | ethylene response factor | HC |
           chr7:19252386-19257484 | 20130731
          Length = 224

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/234 (50%), Positives = 132/234 (56%), Gaps = 11/234 (4%)

Query: 1   MVSXXXXXXXXXCSGDNSFVTPLPLYCENLAGDENSSQHGKPKRQSEQAVLSDIASVLDS 60
           MVS         CSG +SFV PLPLYCENL G EN S H KPK  SEQ +LSD AS+ DS
Sbjct: 1   MVSLRRRRLLGLCSGSSSFVNPLPLYCENLTGSENLSWHAKPK--SEQPMLSDDASIPDS 58

Query: 61  NTIVKDEXXXXXXXXXXXXXXXXXXXXXXXXXXRRKRHSRKPIHNQEPCLMRGVYFKNMK 120
           NT+V++E                          RRKRH RK +H+QE   MRGVYFKNMK
Sbjct: 59  NTVVQEEPGSSNISGSSSSKELLIQSTVGPAVKRRKRHRRKNLHSQE-VSMRGVYFKNMK 117

Query: 121 WQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGXXXXXXXXXXXXXXXXXXXXXXXLA 180
           WQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCG                       LA
Sbjct: 118 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFDLPEEEKQELRKFKWDDFLA 177

Query: 181 MTRQAITSKKHKGRHSPGPRNRIEEPSLHIGDSKSKQVANDFSGSGYAEQETAI 234
           MTRQAIT KK K   SP   N          D +SKQ  + FS    A+QET++
Sbjct: 178 MTRQAITRKKLKRMISPELPNSF--------DWESKQGVSGFSPYEDADQETSM 223


>Medtr7g055857.2 | ethylene response factor | HC |
           chr7:19252386-19257484 | 20130731
          Length = 224

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/234 (50%), Positives = 132/234 (56%), Gaps = 11/234 (4%)

Query: 1   MVSXXXXXXXXXCSGDNSFVTPLPLYCENLAGDENSSQHGKPKRQSEQAVLSDIASVLDS 60
           MVS         CSG +SFV PLPLYCENL G EN S H KPK  SEQ +LSD AS+ DS
Sbjct: 1   MVSLRRRRLLGLCSGSSSFVNPLPLYCENLTGSENLSWHAKPK--SEQPMLSDDASIPDS 58

Query: 61  NTIVKDEXXXXXXXXXXXXXXXXXXXXXXXXXXRRKRHSRKPIHNQEPCLMRGVYFKNMK 120
           NT+V++E                          RRKRH RK +H+QE   MRGVYFKNMK
Sbjct: 59  NTVVQEEPGSSNISGSSSSKELLIQSTVGPAVKRRKRHRRKNLHSQE-VSMRGVYFKNMK 117

Query: 121 WQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGXXXXXXXXXXXXXXXXXXXXXXXLA 180
           WQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCG                       LA
Sbjct: 118 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFDLPEEEKQELRKFKWDDFLA 177

Query: 181 MTRQAITSKKHKGRHSPGPRNRIEEPSLHIGDSKSKQVANDFSGSGYAEQETAI 234
           MTRQAIT KK K   SP   N          D +SKQ  + FS    A+QET++
Sbjct: 178 MTRQAITRKKLKRMISPELPNSF--------DWESKQGVSGFSPYEDADQETSM 223