Miyakogusa Predicted Gene

Lj3g3v0718660.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0718660.1 Non Characterized Hit- tr|I3SQW6|I3SQW6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.25,0,Dxr:
1-deoxy-D-xylulose 5-phosphate reductoisomera,1-deoxy-D-xylulose
5-phosphate reductoisomerase;
,NODE_783_length_1406_cov_700.189880.path1.1
         (266 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g012565.1 | 1-deoxy-D-xylulose 5-phosphate reductoisomeras...   501   e-142
Medtr4g106870.1 | 1-deoxy-D-xylulose 5-phosphate reductoisomeras...   462   e-130
Medtr8g012565.2 | 1-deoxy-D-xylulose 5-phosphate reductoisomeras...   328   3e-90

>Medtr8g012565.1 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
           HC | chr8:3629640-3635402 | 20130731
          Length = 470

 Score =  501 bits (1290), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 235/265 (88%), Positives = 251/265 (94%)

Query: 1   MIAGAPFILPLAHKHNIKFLPADSEHSAIFQCIQGLPIGALRKIQLTASGGAFREWPVEK 60
           MIAG  F+LPLAHK+NIK LPADSEHSAIFQCIQGLP GALRKIQLT SGGAFREWP EK
Sbjct: 205 MIAGGAFVLPLAHKNNIKILPADSEHSAIFQCIQGLPKGALRKIQLTGSGGAFREWPAEK 264

Query: 61  MKDIKVSDALKHPIWTLGRKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH 120
           MKDIK+ DALKHPIW+LGRKIT+DSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH
Sbjct: 265 MKDIKLKDALKHPIWSLGRKITIDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH 324

Query: 121 SMIETQDSSVIAQLGIPDMRLPLLYTLSWPERIYCSEITYPRLDLTKYGKLTFEAPNTAK 180
           S++ETQDSSVIAQLG+PDMRLPLLYTLSWPER+YCSEIT+PRLDLTKYG LTF+AP+T K
Sbjct: 325 SLVETQDSSVIAQLGLPDMRLPLLYTLSWPERVYCSEITWPRLDLTKYGTLTFQAPDTKK 384

Query: 181 FPSVNLCYAAGRAGGTMTGVLSAANEKAVELFVEEKISYLDIFKVVELTCDEHQKELVAF 240
           FPSVNLCYAAGRAGGTMTGVLSAANE AVELFV EKISYLDIFK+ ELTC+EHQKELV  
Sbjct: 385 FPSVNLCYAAGRAGGTMTGVLSAANEIAVELFVAEKISYLDIFKIAELTCNEHQKELVTS 444

Query: 241 PSLEEIVHYDQWARQYAAGLQKALS 265
           P+LEEI+HYDQWARQYAAGLQKALS
Sbjct: 445 PTLEEILHYDQWARQYAAGLQKALS 469


>Medtr4g106870.1 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
           HC | chr4:43911321-43906312 | 20130731
          Length = 475

 Score =  462 bits (1189), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 212/266 (79%), Positives = 244/266 (91%)

Query: 1   MIAGAPFILPLAHKHNIKFLPADSEHSAIFQCIQGLPIGALRKIQLTASGGAFREWPVEK 60
           +IAG PF+LPLA KHN+K LPADSEHSAIFQCIQGL  GALR++ LTASGGAFR+WPVEK
Sbjct: 205 LIAGGPFVLPLARKHNVKILPADSEHSAIFQCIQGLTEGALRRVILTASGGAFRDWPVEK 264

Query: 61  MKDIKVSDALKHPIWTLGRKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH 120
           +KD+KV+DALKHP W++G+KITVDSATLFNKGLEVIEAHYLFGA+YDDI+IVIHPQSIIH
Sbjct: 265 LKDVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGADYDDIDIVIHPQSIIH 324

Query: 121 SMIETQDSSVIAQLGIPDMRLPLLYTLSWPERIYCSEITYPRLDLTKYGKLTFEAPNTAK 180
           SMIETQDSSV+AQLG PDMRLP+LYTLSWP+R+YCSE+T+PRLDL K G LTF+AP+  K
Sbjct: 325 SMIETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEVTWPRLDLCKLGSLTFKAPDNIK 384

Query: 181 FPSVNLCYAAGRAGGTMTGVLSAANEKAVELFVEEKISYLDIFKVVELTCDEHQKELVAF 240
           +PS+NL YAAGRAGGTMTGVLSAANEKAVE+F++EKISYLDIFKVVELTC +HQ EL+  
Sbjct: 385 YPSMNLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCQKHQDELLTS 444

Query: 241 PSLEEIVHYDQWARQYAAGLQKALSF 266
           PSLEEI+HYD WAR+YAA LQ + SF
Sbjct: 445 PSLEEIIHYDLWAREYAASLQSSSSF 470


>Medtr8g012565.2 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
           HC | chr8:3629640-3635387 | 20130731
          Length = 384

 Score =  328 bits (841), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 151/173 (87%), Positives = 163/173 (94%)

Query: 1   MIAGAPFILPLAHKHNIKFLPADSEHSAIFQCIQGLPIGALRKIQLTASGGAFREWPVEK 60
           MIAG  F+LPLAHK+NIK LPADSEHSAIFQCIQGLP GALRKIQLT SGGAFREWP EK
Sbjct: 205 MIAGGAFVLPLAHKNNIKILPADSEHSAIFQCIQGLPKGALRKIQLTGSGGAFREWPAEK 264

Query: 61  MKDIKVSDALKHPIWTLGRKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH 120
           MKDIK+ DALKHPIW+LGRKIT+DSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH
Sbjct: 265 MKDIKLKDALKHPIWSLGRKITIDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH 324

Query: 121 SMIETQDSSVIAQLGIPDMRLPLLYTLSWPERIYCSEITYPRLDLTKYGKLTF 173
           S++ETQDSSVIAQLG+PDMRLPLLYTLSWPER+YCSEIT+PRLDLTKY + + 
Sbjct: 325 SLVETQDSSVIAQLGLPDMRLPLLYTLSWPERVYCSEITWPRLDLTKYNRFSL 377