Miyakogusa Predicted Gene

Lj3g3v0718650.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0718650.1 Non Characterized Hit- tr|I1JMK1|I1JMK1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.32,0,TGF BETA
RECEPTOR ASSOCIATED PROTEIN RELATED,NULL; CNH DOMAIN CONTAINING,NULL;
Vps39_2,Vacuolar sort,CUFF.41189.1
         (992 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g012560.1 | vacuolar sorting protein 39 domain protein | H...  1623   0.0  
Medtr8g012560.2 | vacuolar sorting protein 39 domain protein | H...  1003   0.0  

>Medtr8g012560.1 | vacuolar sorting protein 39 domain protein | HC |
           chr8:3613259-3627710 | 20130731
          Length = 985

 Score = 1623 bits (4202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 814/1000 (81%), Positives = 875/1000 (87%), Gaps = 23/1000 (2%)

Query: 1   MAKPE-PSTTRIVMEPLSQFDISTHSRTTTVRSLAIATLPNSHHHRAVLYVGTHSGTLFS 59
           MAKPE  +TTR V+EP SQFD+STHSRTTTVRS+AI T+ N    R +L++GTHSGT+FS
Sbjct: 1   MAKPESTTTTRTVIEPHSQFDLSTHSRTTTVRSIAITTISN----RTILFIGTHSGTIFS 56

Query: 60  LSADTT-VQNGDSTSFLRKLSFLRXXXXXXXXXXXXXXXXXXXXXXXXSEGSLFLVDSEL 118
           LS +     N  + + L  LSF+R                        S+GSLFLVDS+L
Sbjct: 57  LSPNQNDTNNPQNDTVLPNLSFIRSVSVTHTSIDTVLVLSDLGKVLILSDGSLFLVDSDL 116

Query: 119 SNRAVKLGFSKGVGVVTRRKLRSXXXXXXXXXXXASNSQRFLQKLGGLRLKEGEVLQG-G 177
           SN AVKLGFSKG+ VVTRRK+R+            +N+++FLQKLGGL L     LQ  G
Sbjct: 117 SNGAVKLGFSKGISVVTRRKMRNNESENLGLGLD-TNNKKFLQKLGGLNLNSN--LQSEG 173

Query: 178 EGGCVLALAIGRRLVIVELVLGNRGGKSDKD-GNGSLVVLKEIQCVDGVVSTMLWIDDSI 236
             GCVLA++IGRRL+IVE+VL        KD  N SLVVLKEIQCVDG +STM+WIDDSI
Sbjct: 174 FSGCVLAISIGRRLMIVEIVL--------KDVNNASLVVLKEIQCVDGDISTMVWIDDSI 225

Query: 237 IVGTVNGYSLISCVSGQSSVIFSLPDVSRPPRLKLLHKEWRVLLLVDNVGIIVDAHGQPV 296
           IVGT NGYSLISCVSG SSVIFSLPDVSRPPRLKLL+++WRVLLLVDNVGIIVD  GQPV
Sbjct: 226 IVGTANGYSLISCVSGLSSVIFSLPDVSRPPRLKLLYRDWRVLLLVDNVGIIVDEKGQPV 285

Query: 297 GGSLVFRHGLDSVGELSSYVVIVSDGKIELYHKKNGSCVQVLPFGGEGIGPCIVASEEGR 356
           GGSLVFR GLDSVGELS YVV+VSDGK+ELY+KKNG CVQVL FGGEGIGPC+VASEE +
Sbjct: 286 GGSLVFRRGLDSVGELSFYVVVVSDGKVELYNKKNGGCVQVLAFGGEGIGPCVVASEEDK 345

Query: 357 GGELVAVATATKVVCYQKLPSVEQIKDLLRKKNYKGAISLVEELESEGEMSKDLLSFVHA 416
           GG+LVAVATATKVVCY+KLPSV+QIKDLLRKKNYKGAISLVEELE EGEMS +LLSFVHA
Sbjct: 346 GGKLVAVATATKVVCYRKLPSVDQIKDLLRKKNYKGAISLVEELEYEGEMSNELLSFVHA 405

Query: 417 QVGFLLLFDLHFEEAVDHFLRSETMEPSEVFPFIMRDPNRWSLLVPRNRYWGLHPPPAPL 476
           QVGFLLLFDLHFEEAV+HFL SETM+PSE+FPFIMRDPNRWSLLVPRNRYWGLHPPPAPL
Sbjct: 406 QVGFLLLFDLHFEEAVNHFLLSETMQPSEIFPFIMRDPNRWSLLVPRNRYWGLHPPPAPL 465

Query: 477 EDVVDDGLMTIQRASFLRKAGVETIVDNDLFLNPPNRADLLESAIKNISRYLEDCREKNL 536
           EDVVDDGLMTIQRASFLRKAGVETIVDND FLNPPNRADLLESAIKNISRYLE CREK L
Sbjct: 466 EDVVDDGLMTIQRASFLRKAGVETIVDNDHFLNPPNRADLLESAIKNISRYLEACREKKL 525

Query: 537 SQSVREGVDTLLMYLYRALNNVEDMERLASSTNWCVVEELEHMLEESGHLRTLAFLYASK 596
           +QSV EGVDTLLMYLYRALN VEDMERLASSTNWCVVEELEHMLEESGHLRTLAFLYASK
Sbjct: 526 TQSVSEGVDTLLMYLYRALNRVEDMERLASSTNWCVVEELEHMLEESGHLRTLAFLYASK 585

Query: 597 GMSSKAVSIWRILARNYSSGLWKGPALENNIPDSGENLISGKAIAAAEASKILEGSSDQD 656
           GMSSKAVSIWRILARNYSS L K PALE  I DSGENLISGKAIAAAEASKILE SSDQD
Sbjct: 586 GMSSKAVSIWRILARNYSSSLRKDPALETIIQDSGENLISGKAIAAAEASKILELSSDQD 645

Query: 657 LILQHLGWISDISQVLAVDVLTSNKREIQLSPDEVVTSIDPQKVEILQRYLQWLIEEQDC 716
           LILQHLGWI+DISQVLAV+VLTS+KREIQLSPDEVVTSIDP+KVEILQRYLQWLIE+QDC
Sbjct: 646 LILQHLGWIADISQVLAVEVLTSDKREIQLSPDEVVTSIDPKKVEILQRYLQWLIEDQDC 705

Query: 717 IDTQFHTVYALSLAKSAIEAFESENVD----SGNIETKRLSMLTDSIFQTTVRERLQIFL 772
            DTQ HT+YALSLAKSAIEA E EN+     SGN E   ++ L +SIFQT VRERLQ FL
Sbjct: 706 FDTQLHTLYALSLAKSAIEASEFENISESLASGNTERNNMTTLRNSIFQTPVRERLQFFL 765

Query: 773 QSSDLYDPEEVLDLIEGSELWLEKAILYRRLGQETLVLQILALKLEDSEAAEQYCAEIGR 832
           QSSDLYDPEEVLDLIEGSELWLEKAILYRRLGQETLVLQILALKLEDSEAAEQYCAEIGR
Sbjct: 766 QSSDLYDPEEVLDLIEGSELWLEKAILYRRLGQETLVLQILALKLEDSEAAEQYCAEIGR 825

Query: 833 ADAYMQLLDMYLDPQDGKDPMFTAAVRLLHNHGESLDPLQVLEKLSPDMPLQLASETLLR 892
           +DAYMQLL+MYLDPQDGK+PMFTAAVRLLHNHGESLDPLQVLEKLSPDMPLQLASETLLR
Sbjct: 826 SDAYMQLLEMYLDPQDGKEPMFTAAVRLLHNHGESLDPLQVLEKLSPDMPLQLASETLLR 885

Query: 893 MFRARVHHHRQGQIVHNLSRAVDIDARLSRLDERSRHVQINDESLCDSCNARLGTKLFAM 952
           MFRARVHHHRQGQIVHNLSRAVDIDARLSRLDERSRH+QINDESLCDSCNARLGTKLFAM
Sbjct: 886 MFRARVHHHRQGQIVHNLSRAVDIDARLSRLDERSRHMQINDESLCDSCNARLGTKLFAM 945

Query: 953 YPDDCVVCYKCYRRQGESVSVSGRNFKEDVLIKPGWVVSR 992
           YPDD VVCYKCYRRQGESVSVSGRNFKED++IKPGW+VSR
Sbjct: 946 YPDDTVVCYKCYRRQGESVSVSGRNFKEDIIIKPGWLVSR 985


>Medtr8g012560.2 | vacuolar sorting protein 39 domain protein | HC |
           chr8:3613282-3627710 | 20130731
          Length = 893

 Score = 1003 bits (2592), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/536 (91%), Positives = 506/536 (94%), Gaps = 4/536 (0%)

Query: 461 VPRNRYWGLHPPPAPLEDVVDDGLMTIQRASFLRKAGVETIVDNDLFLNPPNRADLLESA 520
           VPRNRYWGLHPPPAPLEDVVDDGLMTIQRASFLRKAGVETIVDND FLNPPNRADLLESA
Sbjct: 358 VPRNRYWGLHPPPAPLEDVVDDGLMTIQRASFLRKAGVETIVDNDHFLNPPNRADLLESA 417

Query: 521 IKNISRYLEDCREKNLSQSVREGVDTLLMYLYRALNNVEDMERLASSTNWCVVEELEHML 580
           IKNISRYLE CREK L+QSV EGVDTLLMYLYRALN VEDMERLASSTNWCVVEELEHML
Sbjct: 418 IKNISRYLEACREKKLTQSVSEGVDTLLMYLYRALNRVEDMERLASSTNWCVVEELEHML 477

Query: 581 EESGHLRTLAFLYASKGMSSKAVSIWRILARNYSSGLWKGPALENNIPDSGENLISGKAI 640
           EESGHLRTLAFLYASKGMSSKAVSIWRILARNYSS L K PALE  I DSGENLISGKAI
Sbjct: 478 EESGHLRTLAFLYASKGMSSKAVSIWRILARNYSSSLRKDPALETIIQDSGENLISGKAI 537

Query: 641 AAAEASKILEGSSDQDLILQHLGWISDISQVLAVDVLTSNKREIQLSPDEVVTSIDPQKV 700
           AAAEASKILE SSDQDLILQHLGWI+DISQVLAV+VLTS+KREIQLSPDEVVTSIDP+KV
Sbjct: 538 AAAEASKILELSSDQDLILQHLGWIADISQVLAVEVLTSDKREIQLSPDEVVTSIDPKKV 597

Query: 701 EILQRYLQWLIEEQDCIDTQFHTVYALSLAKSAIEAFESENVD----SGNIETKRLSMLT 756
           EILQRYLQWLIE+QDC DTQ HT+YALSLAKSAIEA E EN+     SGN E   ++ L 
Sbjct: 598 EILQRYLQWLIEDQDCFDTQLHTLYALSLAKSAIEASEFENISESLASGNTERNNMTTLR 657

Query: 757 DSIFQTTVRERLQIFLQSSDLYDPEEVLDLIEGSELWLEKAILYRRLGQETLVLQILALK 816
           +SIFQT VRERLQ FLQSSDLYDPEEVLDLIEGSELWLEKAILYRRLGQETLVLQILALK
Sbjct: 658 NSIFQTPVRERLQFFLQSSDLYDPEEVLDLIEGSELWLEKAILYRRLGQETLVLQILALK 717

Query: 817 LEDSEAAEQYCAEIGRADAYMQLLDMYLDPQDGKDPMFTAAVRLLHNHGESLDPLQVLEK 876
           LEDSEAAEQYCAEIGR+DAYMQLL+MYLDPQDGK+PMFTAAVRLLHNHGESLDPLQVLEK
Sbjct: 718 LEDSEAAEQYCAEIGRSDAYMQLLEMYLDPQDGKEPMFTAAVRLLHNHGESLDPLQVLEK 777

Query: 877 LSPDMPLQLASETLLRMFRARVHHHRQGQIVHNLSRAVDIDARLSRLDERSRHVQINDES 936
           LSPDMPLQLASETLLRMFRARVHHHRQGQIVHNLSRAVDIDARLSRLDERSRH+QINDES
Sbjct: 778 LSPDMPLQLASETLLRMFRARVHHHRQGQIVHNLSRAVDIDARLSRLDERSRHMQINDES 837

Query: 937 LCDSCNARLGTKLFAMYPDDCVVCYKCYRRQGESVSVSGRNFKEDVLIKPGWVVSR 992
           LCDSCNARLGTKLFAMYPDD VVCYKCYRRQGESVSVSGRNFKED++IKPGW+VSR
Sbjct: 838 LCDSCNARLGTKLFAMYPDDTVVCYKCYRRQGESVSVSGRNFKEDIIIKPGWLVSR 893



 Score =  451 bits (1160), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/373 (65%), Positives = 281/373 (75%), Gaps = 19/373 (5%)

Query: 1   MAKPE-PSTTRIVMEPLSQFDISTHSRTTTVRSLAIATLPNSHHHRAVLYVGTHSGTLFS 59
           MAKPE  +TTR V+EP SQFD+STHSRTTTVRS+AI T+ N    R +L++GTHSGT+FS
Sbjct: 1   MAKPESTTTTRTVIEPHSQFDLSTHSRTTTVRSIAITTISN----RTILFIGTHSGTIFS 56

Query: 60  LSADTT-VQNGDSTSFLRKLSFLRXXXXXXXXXXXXXXXXXXXXXXXXSEGSLFLVDSEL 118
           LS +     N  + + L  LSF+R                        S+GSLFLVDS+L
Sbjct: 57  LSPNQNDTNNPQNDTVLPNLSFIRSVSVTHTSIDTVLVLSDLGKVLILSDGSLFLVDSDL 116

Query: 119 SNRAVKLGFSKGVGVVTRRKLRSXXXXXXXXXXXASNSQRFLQKLGGLRLKEGEVLQG-G 177
           SN AVKLGFSKG+ VVTRRK+R+            +N+++FLQKLGGL L     LQ  G
Sbjct: 117 SNGAVKLGFSKGISVVTRRKMRNNESENLGLGLD-TNNKKFLQKLGGLNLNSN--LQSEG 173

Query: 178 EGGCVLALAIGRRLVIVELVLGNRGGKSDKD-GNGSLVVLKEIQCVDGVVSTMLWIDDSI 236
             GCVLA++IGRRL+IVE+VL        KD  N SLVVLKEIQCVDG +STM+WIDDSI
Sbjct: 174 FSGCVLAISIGRRLMIVEIVL--------KDVNNASLVVLKEIQCVDGDISTMVWIDDSI 225

Query: 237 IVGTVNGYSLISCVSGQSSVIFSLPDVSRPPRLKLLHKEWRVLLLVDNVGIIVDAHGQPV 296
           IVGT NGYSLISCVSG SSVIFSLPDVSRPPRLKLL+++WRVLLLVDNVGIIVD  GQPV
Sbjct: 226 IVGTANGYSLISCVSGLSSVIFSLPDVSRPPRLKLLYRDWRVLLLVDNVGIIVDEKGQPV 285

Query: 297 GGSLVFRHGLDSVGELSSYVVIVSDGKIELYHKKNGSCVQVLPFGGEGIGPCIVASEEGR 356
           GGSLVFR GLDSVGELS YVV+VSDGK+ELY+KKNG CVQVL FGGEGIGPC+VASEE +
Sbjct: 286 GGSLVFRRGLDSVGELSFYVVVVSDGKVELYNKKNGGCVQVLAFGGEGIGPCVVASEEDK 345

Query: 357 GGELVAVATATKV 369
           GG+LVAVATATKV
Sbjct: 346 GGKLVAVATATKV 358