Miyakogusa Predicted Gene

Lj3g3v0718540.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0718540.2 Non Characterized Hit- tr|I1K261|I1K261_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,71.47,0,ZF_BED,Zinc finger, BED-type predicted; zf-BED,Zinc
finger, BED-type predicted; SUBFAMILY NOT NAMED,,CUFF.41180.2
         (449 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g021700.1 | hypothetical protein | LC | chr6:7461643-74612...    60   4e-09
Medtr4g036325.1 | hypothetical protein | LC | chr4:13081348-1308...    60   5e-09
Medtr5g034530.1 | hypothetical protein | LC | chr5:14993712-1499...    55   1e-07

>Medtr6g021700.1 | hypothetical protein | LC | chr6:7461643-7461266
           | 20130731
          Length = 106

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 33/136 (24%)

Query: 3   SALENNEPVSTNPVVMAVDELVQPDSSQLQENE-QGNDLVGEEAXXXXXXXXTSSVWEDF 61
           S+  N EP        A     Q +++  QE E Q   +VG +         TS +W+DF
Sbjct: 2   SSQANEEPT------QAGANTTQGEANATQEEETQVEPIVGRK------RKKTSVIWKDF 49

Query: 62  YEVNLVGGKMKAVCKYCKQKFATSGVGASTSHLRRHGEVCTQKSLQKASEKKQSVIPFQP 121
            E  +  G                   +STS ++RH   CT K LQ A+EK+Q+ IPF+ 
Sbjct: 50  DEKEITNG-------------------SSTSQMKRHLVSCTAKKLQDATEKRQAAIPFKR 90

Query: 122 -SNGNPFIISGARYNN 136
            S+GNPF+ SG  Y+N
Sbjct: 91  VSSGNPFLTSGVGYSN 106


>Medtr4g036325.1 | hypothetical protein | LC |
           chr4:13081348-13082899 | 20130731
          Length = 204

 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 12/115 (10%)

Query: 147 IMVHEMPFNVVEDEVWMWAFQYANSDFTKV-TRKTIRKDCLALYEAEKKILKTM--LNSV 203
           I++HE P   + D +   A+        KV +R T++ D + +YE EK  LKTM  L+ +
Sbjct: 2   IIIHEYPPLSIVDHLGFRAYSEGLQHLFKVPSRNTVKSDIIKIYENEK--LKTMGLLDKI 59

Query: 204 -NKISLTTDMWKSSHKVTEYMVLTGHFIDVGWKLQKRVLSFVK------VPAPRR 251
            +KI+LT+ M  +S++   YMV+T H+I   W +Q R+L   K      +P  RR
Sbjct: 60  ESKIALTSYMLTASNQKKGYMVITAHYISDDWSMQSRILRENKTTGNKMLPRSRR 114


>Medtr5g034530.1 | hypothetical protein | LC |
           chr5:14993712-14993306 | 20130731
          Length = 111

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 43/65 (66%)

Query: 287 LKNLKDTLSLSSKLFLNGALFHVRCCAHILNLLVQDGLGKIKSIIFNVRESVKYINYNDA 346
           L+ LK  +   + L +NG  FH+RCCAH+LNL+V DGL  + S +  VR +V++++ +  
Sbjct: 12  LEYLKKKIININGLMMNGFGFHMRCCAHVLNLVVIDGLKYVHSSVSRVRNAVQFVDLHPI 71

Query: 347 RLKNF 351
            L++F
Sbjct: 72  GLQSF 76