Miyakogusa Predicted Gene

Lj3g3v0718500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0718500.1 Non Characterized Hit- tr|B8LKC1|B8LKC1_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,43.24,1e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_34548_length_728_cov_358.888733.path1.1
         (120 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g012420.1 | DUF760 family protein | HC | chr8:3542307-3545...   189   3e-49
Medtr6g071465.2 | plant/T1N15-5 protein | HC | chr6:26484510-264...    85   2e-17
Medtr6g071465.1 | plant/T1N15-5 protein | HC | chr6:26484510-264...    85   2e-17
Medtr5g028020.1 | plant/F3C3-6 protein | HC | chr5:11708806-1171...    77   4e-15
Medtr7g053530.1 | DUF760 family protein | LC | chr7:18865635-188...    69   8e-13

>Medtr8g012420.1 | DUF760 family protein | HC | chr8:3542307-3545267
           | 20130731
          Length = 372

 Score =  189 bits (481), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 95/121 (78%), Positives = 104/121 (85%), Gaps = 2/121 (1%)

Query: 1   MCN-GLKDTIFGRLSNMPSSVGKGLIRQEEELEDLKCYVMSFHPGSLQRCARLRSKEAVN 59
           MC  G +D IFG LSNM   +G+GLIRQEEE+EDLKCYVM FHPGSLQRCA+LRSKEAVN
Sbjct: 253 MCPYGFEDDIFGHLSNM-KPIGQGLIRQEEEIEDLKCYVMRFHPGSLQRCAKLRSKEAVN 311

Query: 60  LIESYSFALFNHEGSGSVEKDDEILTSFSSLKRLVLEAVAFGSFLWETEDYIDMLYKLKD 119
           L+ SYS ALFN EG  SV+ DD ILTSFSSLKRLVLEAVAFGSFLWETEDYID +YKLKD
Sbjct: 312 LVRSYSSALFNSEGFDSVDSDDVILTSFSSLKRLVLEAVAFGSFLWETEDYIDNVYKLKD 371

Query: 120 N 120
           +
Sbjct: 372 H 372


>Medtr6g071465.2 | plant/T1N15-5 protein | HC |
           chr6:26484510-26489227 | 20130731
          Length = 418

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 7/105 (6%)

Query: 18  SSVGKGLIRQEEELEDLKCYVMSFHPGSLQRCARLRSKEAVNLIESYSFALFNH------ 71
           S +  G   QE  +  L+ Y+MSF   +LQR A +RSKEAV++IE+++ ALF        
Sbjct: 309 SGISSGANDQEITVSRLRSYMMSFDIETLQRYATIRSKEAVSIIENHTEALFGRPEIVIT 368

Query: 72  -EGSGSVEKDDEILTSFSSLKRLVLEAVAFGSFLWETEDYIDMLY 115
            EG  +  KD+ I      LKRLVLEAV FGSFLW+ E Y+D  Y
Sbjct: 369 PEGKINSSKDEIIKIRIGGLKRLVLEAVTFGSFLWDVESYVDSRY 413


>Medtr6g071465.1 | plant/T1N15-5 protein | HC |
           chr6:26484510-26489227 | 20130731
          Length = 418

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 7/105 (6%)

Query: 18  SSVGKGLIRQEEELEDLKCYVMSFHPGSLQRCARLRSKEAVNLIESYSFALFNH------ 71
           S +  G   QE  +  L+ Y+MSF   +LQR A +RSKEAV++IE+++ ALF        
Sbjct: 309 SGISSGANDQEITVSRLRSYMMSFDIETLQRYATIRSKEAVSIIENHTEALFGRPEIVIT 368

Query: 72  -EGSGSVEKDDEILTSFSSLKRLVLEAVAFGSFLWETEDYIDMLY 115
            EG  +  KD+ I      LKRLVLEAV FGSFLW+ E Y+D  Y
Sbjct: 369 PEGKINSSKDEIIKIRIGGLKRLVLEAVTFGSFLWDVESYVDSRY 413


>Medtr5g028020.1 | plant/F3C3-6 protein | HC |
           chr5:11708806-11712504 | 20130731
          Length = 410

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 7/91 (7%)

Query: 34  LKCYVMSFHPGSLQRCARLRSKEAVNLIESYSFALFNHE-----GSGSVEK-DDEILT-S 86
           L+ YV      +LQR A +RSKEA++LIE  + ALF        G GS+E  +DE+L+ +
Sbjct: 317 LRAYVTQLDTEALQRLATVRSKEAISLIEKQTQALFGRPDIRLSGDGSIETTNDEVLSLT 376

Query: 87  FSSLKRLVLEAVAFGSFLWETEDYIDMLYKL 117
           FS L  LVLE+VAFGSFLW+ E+Y++  Y  
Sbjct: 377 FSGLTMLVLESVAFGSFLWDEENYVESKYPF 407


>Medtr7g053530.1 | DUF760 family protein | LC |
           chr7:18865635-18867605 | 20130731
          Length = 345

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 69/121 (57%), Gaps = 14/121 (11%)

Query: 13  LSNMPSSVGKG-----LIRQEEELEDLKCYVMSF-HPGSLQRCARLRSKEAVNLIESYSF 66
           LS+   + G G     L +QE E   LK YV  F  P  +    +LR KEA+ LIES++ 
Sbjct: 221 LSDHDLNTGHGSKNVFLGKQEIENGTLKDYVKGFKRPRLVLDGCKLRYKEALQLIESHTQ 280

Query: 67  ALFNHEGSGSVEKDDE--------ILTSFSSLKRLVLEAVAFGSFLWETEDYIDMLYKLK 118
           ALF H     + + D+        I  SFSS+KRL+ E +AFGSFLW  ED+ID +YKL+
Sbjct: 281 ALFEHNKECGLNEFDDDDEEDDRFIEASFSSIKRLLWEGLAFGSFLWMAEDFIDGIYKLE 340

Query: 119 D 119
           +
Sbjct: 341 E 341