Miyakogusa Predicted Gene

Lj3g3v0718210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0718210.1 tr|C1EEL0|C1EEL0_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_103168,31.46,0.00000000000002,seg,NULL; MYB_LIKE,Myb-like
domain; HTH_MYB,Myb domain; SUBFAMILY NOT NAMED,NULL; MYB-LIKE
DNA-BINDI,CUFF.41152.1
         (379 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g077990.1 | Myb transcription factor-like protein | HC | c...   293   2e-79
Medtr1g076600.1 | cyclin-D-binding Myb-like transcription factor...    68   1e-11
Medtr3g110028.2 | transcription repressor MYB5 | HC | chr3:50889...    51   2e-06
Medtr3g110028.1 | transcription repressor MYB5 | HC | chr3:50889...    51   2e-06
Medtr7g029435.1 | cyclin-D-binding Myb-like transcription factor...    49   1e-05

>Medtr8g077990.1 | Myb transcription factor-like protein | HC |
           chr8:33236002-33231926 | 20130731
          Length = 693

 Score =  293 bits (750), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 157/285 (55%), Positives = 193/285 (67%), Gaps = 20/285 (7%)

Query: 97  GDAKACGDVTGVDDQSXXXXXXXXXXXGTDESSIPAALGETSKPKRVTFSDQVE--VCGD 154
           GDA AC  VT V+DQ             T ES   A  G TSK K+VT++D+VE  +C D
Sbjct: 362 GDADACFSVTDVNDQGKKMKKKKKAKTVTSESPNSAHNG-TSKRKQVTWADEVEEKLCCD 420

Query: 155 DGLVRGKRFTPEEDEKIKEAVCDYIKSHGLGDEGLNMILYCISHPEVRGCWKEIGAALPH 214
            GL+RGKR+TPEEDEKIK AV DYI SHGLGDEGL+M+L    HPE              
Sbjct: 421 -GLLRGKRYTPEEDEKIKAAVFDYIDSHGLGDEGLDMVLNVKLHPE-------------- 465

Query: 215 RPHQSVYYRAHIIFERDEGR-KWTPEELDFLLKAQDQHGSDWKLIAEGLNKHRLHVKDTW 273
           RP++SVY RAH + E+ EGR KWTPEEL+F+ K  +QHG+  + +A+ L K R  VKD W
Sbjct: 466 RPYESVYRRAHTLLEK-EGRCKWTPEELEFIEKTYEQHGASLRAVADALGKSRAQVKDAW 524

Query: 274 RRIRRTNANKGRWSQDEHQRLFDLVNKDLCARAAEDCRKTKHGMLRDNVSWEAISDEFGT 333
           RR++ T A KG WSQ+E+Q+LF+LVN DL  RA E  +K++ GMLRDN+ WEAI  +  T
Sbjct: 525 RRLKYTKAKKGHWSQEEYQKLFNLVNLDLLERAKEPYKKSQPGMLRDNICWEAIGHKLET 584

Query: 334 RAIALCCMKWYQQLTSPMVADGIWSDSDDYRLLNALYALDACSME 378
           R  A CC KWY+QLTS MVA G W D+DD+RL+NALYALDAC ME
Sbjct: 585 RNSAFCCKKWYEQLTSTMVASGDWCDTDDFRLINALYALDACCME 629


>Medtr1g076600.1 | cyclin-D-binding Myb-like transcription
           factor-like protein | LC | chr1:34156041-34156783 |
           20130731
          Length = 155

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 33/37 (89%)

Query: 342 KWYQQLTSPMVADGIWSDSDDYRLLNALYALDACSME 378
           KWY+QLTSPMVA G W D+DD+RL+NALYALDAC ME
Sbjct: 55  KWYEQLTSPMVASGDWCDTDDFRLINALYALDACCME 91


>Medtr3g110028.2 | transcription repressor MYB5 | HC |
           chr3:50889343-50895792 | 20130731
          Length = 903

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 15/110 (13%)

Query: 235 KWTPEELDFLLKAQDQ-HGSDWKLIAEGLNKHRLHVK--DTWRRIRRTNANKGRWSQDEH 291
           +WTPEE + L KA ++  G +WK IAE   K R  V+    W+++      KG WS++E 
Sbjct: 35  QWTPEEDNILRKAVERFQGKNWKKIAECF-KDRTDVQCLHRWQKVLNPELIKGPWSKEED 93

Query: 292 QRLFDLVNK-----------DLCARAAEDCRKTKHGMLRDNVSWEAISDE 330
           + + DLVNK            L  R  + CR+  H  L  +++ EA + E
Sbjct: 94  ETIVDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQE 143


>Medtr3g110028.1 | transcription repressor MYB5 | HC |
           chr3:50889355-50895583 | 20130731
          Length = 903

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 15/110 (13%)

Query: 235 KWTPEELDFLLKAQDQ-HGSDWKLIAEGLNKHRLHVK--DTWRRIRRTNANKGRWSQDEH 291
           +WTPEE + L KA ++  G +WK IAE   K R  V+    W+++      KG WS++E 
Sbjct: 35  QWTPEEDNILRKAVERFQGKNWKKIAECF-KDRTDVQCLHRWQKVLNPELIKGPWSKEED 93

Query: 292 QRLFDLVNK-----------DLCARAAEDCRKTKHGMLRDNVSWEAISDE 330
           + + DLVNK            L  R  + CR+  H  L  +++ EA + E
Sbjct: 94  ETIVDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQE 143


>Medtr7g029435.1 | cyclin-D-binding Myb-like transcription
           factor-like protein | HC | chr7:10515703-10515981 |
           20130731
          Length = 92

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/28 (75%), Positives = 24/28 (85%)

Query: 351 MVADGIWSDSDDYRLLNALYALDACSME 378
           MVA G W D+DD+RL+NALYALDAC ME
Sbjct: 1   MVASGDWCDTDDFRLINALYALDACCME 28