Miyakogusa Predicted Gene

Lj3g3v0682870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0682870.1 tr|A2Q1F1|A2Q1F1_MEDTR SAM (And some other
nucleotide) binding motif OS=Medicago truncatula
GN=MtrDR,86.93,0,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; no description,NULL; Met_10,tRNA
transfer,CUFF.41130.1
         (199 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g081230.1 | tRNA (guanine(37)-N1)-methyltransferase, putat...   371   e-103
Medtr4g112015.1 | tRNA (guanine(37)-N1)-methyltransferase | HC |...    97   9e-21

>Medtr2g081230.1 | tRNA (guanine(37)-N1)-methyltransferase, putative
           | HC | chr2:34081149-34087033 | 20130731
          Length = 475

 Score =  371 bits (953), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 174/199 (87%), Positives = 188/199 (94%)

Query: 1   MEFAFRYWNSRLATERQRLLSGFTRNDVICDVFSGVGPLAISAARIVKRVYANDLNPYAI 60
           ++ A  YWNSRL TERQRLLSGFTRNDV+CDVF+GVGPLAISAA+IVKRV+ANDLNP+A+
Sbjct: 277 VDLAIVYWNSRLGTERQRLLSGFTRNDVVCDVFAGVGPLAISAAKIVKRVFANDLNPHAV 336

Query: 61  EYLERNSVLNKLERKIKVFNMDGRRFIKAIYASDKAQSITQVVMNLPNDAAEFLDAFRGI 120
           EYLERNSVLNKLE+KIKVF MDGRRFI A++ASDKA SITQVVMNLPNDAAEFLDAFRGI
Sbjct: 337 EYLERNSVLNKLEKKIKVFKMDGRRFIMAMFASDKAHSITQVVMNLPNDAAEFLDAFRGI 396

Query: 121 YKDRPTDGDFTLPLIHVYGFSKARDPEFDFHERIRIALLEVAVNVEMRRVRLVAPGKWML 180
           YKDRP DG+FT P+IHVYGFSKA DPEFDFHERIRIALLEVAVNV+MRRVRLVAPGKWML
Sbjct: 397 YKDRPKDGEFTYPMIHVYGFSKAEDPEFDFHERIRIALLEVAVNVDMRRVRLVAPGKWML 456

Query: 181 CASFILPKSVAFAKTAVDT 199
           CASFILPKSVAFA TAVDT
Sbjct: 457 CASFILPKSVAFANTAVDT 475


>Medtr4g112015.1 | tRNA (guanine(37)-N1)-methyltransferase | HC |
           chr4:46345186-46349856 | 20130731
          Length = 474

 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 64/90 (71%)

Query: 1   MEFAFRYWNSRLATERQRLLSGFTRNDVICDVFSGVGPLAISAARIVKRVYANDLNPYAI 60
           ++++  YWNSRL  E +RL+S F   ++ICD+F+G+GP AI AA+    VYANDLNP +I
Sbjct: 172 LDYSLVYWNSRLEHEHKRLVSMFKAGEIICDMFAGIGPFAIPAAQKGCLVYANDLNPDSI 231

Query: 61  EYLERNSVLNKLERKIKVFNMDGRRFIKAI 90
            YL  N+ +NK++ +I  +N+D R+FI  +
Sbjct: 232 HYLRINAKINKVDDQICSYNLDARKFISQL 261



 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 72  LERKIKVFNMDGRRFIKAIYASDKAQSITQVVMNLPNDAAEFLDAFRGIYKDRPTDGDFT 131
           LE   K  + + RR    I A+   + I  VVMNLP  A +FLDAF+G+ + +   G+  
Sbjct: 351 LEGGGKKGSTNKRRRGSEISATKTWEHIDHVVMNLPASAIQFLDAFKGLIQRKYWKGN-- 408

Query: 132 LPLIHVYGFSKARDPEFDFHERIRIALLEVAVNVEMRRVRLVAPGKWMLCASFILPKSV 190
           LPLIH Y F +A +           AL    ++ +  RVR VAP K M C SF LP++ 
Sbjct: 409 LPLIHCYCFIRATETPESIIAVAESALKATILDSKFHRVRDVAPNKAMFCLSFRLPEAC 467