Miyakogusa Predicted Gene
- Lj3g3v0681380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0681380.1 Non Characterized Hit- tr|I3T7A0|I3T7A0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.63,0,Chloroa_b-bind,Chlorophyll A-B binding protein; no
description,Chlorophyll a/b binding protein domai,CUFF.41151.1
(270 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g081090.1 | light-harvesting complex I chlorophyll A/B-bin... 489 e-138
Medtr2g081090.2 | light-harvesting complex I chlorophyll A/B-bin... 449 e-127
Medtr5g097280.1 | light-harvesting complex I chlorophyll A/B-bin... 356 1e-98
Medtr4g094605.1 | light-harvesting complex I chlorophyll A/B-bin... 350 9e-97
Medtr6g012080.1 | light-harvesting complex I chlorophyll A/B-bin... 345 2e-95
Medtr6g011880.1 | light-harvesting complex I chlorophyll A/B-bin... 345 2e-95
Medtr6g011870.1 | light-harvesting complex I chlorophyll A/B-bin... 345 2e-95
Medtr6g011890.1 | light-harvesting complex I chlorophyll A/B-bin... 343 1e-94
Medtr6g012110.1 | light-harvesting complex I chlorophyll A/B-bin... 341 3e-94
Medtr6g043600.1 | light-harvesting complex I chlorophyll A/B-bin... 300 9e-82
Medtr1g026550.1 | light-harvesting complex I chlorophyll A/B-bin... 189 3e-48
Medtr6g060175.1 | light-harvesting complex I chlorophyll A/B-bin... 185 4e-47
Medtr6g060175.2 | light-harvesting complex I chlorophyll A/B-bin... 167 7e-42
Medtr5g098785.1 | light-harvesting complex I chlorophyll A/B-bin... 134 1e-31
Medtr5g098780.1 | light-harvesting complex I chlorophyll A/B-bin... 131 8e-31
Medtr8g023790.1 | light-harvesting complex I chlorophyll A/B-bin... 126 2e-29
Medtr3g101670.1 | light-harvesting complex I chlorophyll A/B-bin... 119 4e-27
Medtr2g042720.1 | light-harvesting complex I chlorophyll A/B-bin... 117 2e-26
Medtr6g033320.1 | light-harvesting complex I chlorophyll A/B-bin... 116 2e-26
Medtr4g015570.1 | light-harvesting complex I chlorophyll A/B-bin... 115 3e-26
Medtr3g435460.1 | light-harvesting complex I chlorophyll A/B-bin... 108 8e-24
Medtr1g026550.2 | light-harvesting complex I chlorophyll A/B-bin... 105 4e-23
Medtr3g435460.2 | light-harvesting complex I chlorophyll A/B-bin... 97 2e-20
Medtr3g070340.1 | light-harvesting complex I chlorophyll A/B-bin... 95 6e-20
Medtr2g008610.1 | light-harvesting complex I chlorophyll A/B-bin... 89 3e-18
Medtr5g098770.1 | light-harvesting complex I chlorophyll A/B-bin... 85 6e-17
Medtr2g436960.1 | light-harvesting complex I chlorophyll A/B-bin... 59 4e-09
Medtr0003s0060.1 | light-harvesting complex I chlorophyll A/B-bi... 53 4e-07
>Medtr2g081090.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:33993832-33992362 |
20130731
Length = 264
Score = 489 bits (1258), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/255 (93%), Positives = 249/255 (97%), Gaps = 1/255 (0%)
Query: 16 VIKPSPFLGQTKGSNSNTLRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLTGE 75
V+K +PFLGQ KG+ +N LRDVV+MGT ++TMGN+LWYGPDRVKYLGPFSAQTPSYLTGE
Sbjct: 11 VVKQTPFLGQRKGA-ANPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGE 69
Query: 76 FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWF 135
FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWF
Sbjct: 70 FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWF 129
Query: 136 KAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGVGEGNNLYPG 195
KAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLPGVGEGNNLYPG
Sbjct: 130 KAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPG 189
Query: 196 GQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPV 255
GQYFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH+D+PV
Sbjct: 190 GQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPV 249
Query: 256 ANNAWVYATKFVPGS 270
ANNAWVYATKFVPGS
Sbjct: 250 ANNAWVYATKFVPGS 264
>Medtr2g081090.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:33993824-33992362 |
20130731
Length = 237
Score = 449 bits (1156), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/223 (97%), Positives = 222/223 (99%)
Query: 48 GNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 107
GN+LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
Sbjct: 15 GNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 74
Query: 108 AMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGF 167
AMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGF
Sbjct: 75 AMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGF 134
Query: 168 QVLLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMF 227
QV+LMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMF
Sbjct: 135 QVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 194
Query: 228 SMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFVPGS 270
SMFGFFVQAIVTGKGPLENLLDH+D+PVANNAWVYATKFVPGS
Sbjct: 195 SMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPGS 237
>Medtr5g097280.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:42601906-42603573 |
20130731
Length = 265
Score = 356 bits (914), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 185/265 (69%), Positives = 206/265 (77%), Gaps = 12/265 (4%)
Query: 15 TVIKPSPFLGQTKGSNSNT-LRDVVSMGTGKYTMGN-------DLWYGPDRVKYLGPFSA 66
+ I+ S F G+T N +R S G ++TM +WYGPDR KYLGPFS
Sbjct: 4 SAIQQSAFTGKTGLKQGNEFIRKAGSFGQSRFTMRRTVKSAPESIWYGPDRPKYLGPFSE 63
Query: 67 QTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVR 126
Q PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC PE+LEK
Sbjct: 64 QIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEILEK-NG 122
Query: 127 VDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGV 186
V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ QV+LMG VEG+R+ G P +
Sbjct: 123 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGP-L 181
Query: 187 GEG-NNLYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 245
GEG + LYPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP++
Sbjct: 182 GEGLDPLYPGGA-FDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVQ 240
Query: 246 NLLDHLDDPVANNAWVYATKFVPGS 270
NL DH+ DPVANNAW YAT FVPG
Sbjct: 241 NLYDHVADPVANNAWAYATNFVPGQ 265
>Medtr4g094605.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr4:38356454-38357760 |
20130731
Length = 266
Score = 350 bits (898), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 183/257 (71%), Positives = 199/257 (77%), Gaps = 5/257 (1%)
Query: 13 SGTVIKPSPFLGQTKGSNSNTLRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYL 72
+G +K +P Q G+ T+R + T K WYGPDRVKYLGPFS + PSYL
Sbjct: 14 AGKPVKLTP-SSQELGAARFTMRKAAT--TKKVASSGSPWYGPDRVKYLGPFSGEPPSYL 70
Query: 73 TGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEP 132
TGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L + V F E
Sbjct: 71 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR-NGVKFGEA 129
Query: 133 VWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGVGEGNNL 192
VWFKAGSQIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+RI G P + L
Sbjct: 130 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPL 189
Query: 193 YPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD 252
YPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL DHL
Sbjct: 190 YPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 248
Query: 253 DPVANNAWVYATKFVPG 269
DPV NNAW YAT FVPG
Sbjct: 249 DPVNNNAWAYATNFVPG 265
>Medtr6g012080.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3575571-3576676 |
20130731
Length = 265
Score = 345 bits (886), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/218 (78%), Positives = 184/218 (84%), Gaps = 2/218 (0%)
Query: 52 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 111
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 49 WYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 108
Query: 112 ALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLL 171
ALGC+ PE+L + V F E VWFKAGSQIFSEGGLDYLGNP+LVHAQSILA+ QV+L
Sbjct: 109 ALGCVFPELLSR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVIL 167
Query: 172 MGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFG 231
MG VEG+RI G P + LYPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMFG
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 226
Query: 232 FFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFVPG 269
FFVQAIVTGKGPLENL DH+ DPV NNAW +AT FVPG
Sbjct: 227 FFVQAIVTGKGPLENLADHITDPVNNNAWAFATNFVPG 264
>Medtr6g011880.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3569245-3570411 |
20130731
Length = 265
Score = 345 bits (885), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/256 (71%), Positives = 195/256 (76%), Gaps = 6/256 (2%)
Query: 14 GTVIKPSPFLGQTKGSNSNTLRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLT 73
G IK SP Q G T+R T K WYGPDRVKYLGPFS + PSYLT
Sbjct: 15 GKAIKLSPST-QDIGVGRVTMRKTT---TKKSVPSGSPWYGPDRVKYLGPFSGEAPSYLT 70
Query: 74 GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPV 133
GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L + V F E V
Sbjct: 71 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR-NGVQFGEAV 129
Query: 134 WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGVGEGNNLY 193
WFKAGSQIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+RI G P + LY
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLY 189
Query: 194 PGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDD 253
PGG FDPLGLA+DP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL D
Sbjct: 190 PGGS-FDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 248
Query: 254 PVANNAWVYATKFVPG 269
PV NNAW YAT F PG
Sbjct: 249 PVNNNAWAYATNFAPG 264
>Medtr6g011870.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3563596-3564681 |
20130731
Length = 265
Score = 345 bits (885), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/256 (71%), Positives = 195/256 (76%), Gaps = 6/256 (2%)
Query: 14 GTVIKPSPFLGQTKGSNSNTLRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLT 73
G IK SP Q G T+R T K WYGPDRVKYLGPFS + PSYLT
Sbjct: 15 GKAIKLSPST-QDIGVGRVTMRKAT---TKKSVPSGSPWYGPDRVKYLGPFSGEAPSYLT 70
Query: 74 GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPV 133
GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L + V F E V
Sbjct: 71 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR-NGVKFGEAV 129
Query: 134 WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGVGEGNNLY 193
WFKAGSQIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+RI G P + LY
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLY 189
Query: 194 PGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDD 253
PGG FDPLGLA+DP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL D
Sbjct: 190 PGGS-FDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 248
Query: 254 PVANNAWVYATKFVPG 269
PV NNAW YAT F PG
Sbjct: 249 PVNNNAWAYATNFAPG 264
>Medtr6g011890.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3572293-3573452 |
20130731
Length = 265
Score = 343 bits (879), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 180/261 (68%), Positives = 197/261 (75%), Gaps = 16/261 (6%)
Query: 14 GTVIKPSP-----FLGQTKGSNSNTLRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQT 68
G IK SP +G+ + T ++V S WYGPDRVKYLGPFS +
Sbjct: 15 GKAIKLSPSTPDLVMGRITMRKTTTKKNVPS---------GSPWYGPDRVKYLGPFSGEA 65
Query: 69 PSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVD 128
PSYLTGEFPGDYGWDTAGLSADPE F+KNR LEVIH RWAMLGALGC+ PE+L + V
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLAR-NGVK 124
Query: 129 FKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGVGE 188
F E VWFKAGSQIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+RI G P
Sbjct: 125 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEV 184
Query: 189 GNNLYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLL 248
+ LYPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL
Sbjct: 185 VDPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 243
Query: 249 DHLDDPVANNAWVYATKFVPG 269
DHL DPV NNAW YAT F PG
Sbjct: 244 DHLADPVNNNAWAYATNFAPG 264
>Medtr6g012110.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:3585659-3584433 |
20130731
Length = 265
Score = 341 bits (875), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 170/218 (77%), Positives = 184/218 (84%), Gaps = 2/218 (0%)
Query: 52 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 111
WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 49 WYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 108
Query: 112 ALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLL 171
ALGC+ PE+L + V F E VWFKAGSQIFSEGGLDYLGNP+LVHAQSILA+ QV+L
Sbjct: 109 ALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVIL 167
Query: 172 MGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFG 231
MG VEG+RI G P + LYPGG FDPLGLA+DP FAELKVKE+KNGRLAMFSMFG
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKELKNGRLAMFSMFG 226
Query: 232 FFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFVPG 269
FFVQAIVTGKGPL+NL DH+ DPV NNAW +AT FVPG
Sbjct: 227 FFVQAIVTGKGPLKNLADHIADPVNNNAWAFATNFVPG 264
>Medtr6g043600.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:13275588-13276379 |
20130731
Length = 229
Score = 300 bits (768), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 162/243 (66%), Positives = 172/243 (70%), Gaps = 30/243 (12%)
Query: 27 KGSNSNTLRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAG 86
KG + T VS G+ WYGPDRVKYLGPF + PSYLTGEFPGDYGW+TAG
Sbjct: 16 KGHHEKTTTKKVSSGSP--------WYGPDRVKYLGPFFGEAPSYLTGEFPGDYGWNTAG 67
Query: 87 LSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGG 146
LSADPE FAKNR LEVIH RWAM WFKA SQIFSEGG
Sbjct: 68 LSADPETFAKNRELEVIHSRWAMFDR---------------------WFKARSQIFSEGG 106
Query: 147 LDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLAD 206
LDYLGNP+LVHAQSILA+ QV+LMG VEG+RI G P + LYPGG FDPLGLAD
Sbjct: 107 LDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVIDPLYPGGS-FDPLGLAD 165
Query: 207 DPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKF 266
DP F ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL DPV NNAW +AT F
Sbjct: 166 DPEAFVELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 225
Query: 267 VPG 269
V G
Sbjct: 226 VLG 228
>Medtr1g026550.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr1:8659686-8663216 |
20130731
Length = 333
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 146/262 (55%), Gaps = 16/262 (6%)
Query: 12 SSGTVIKPSPFLGQTKGSNSNTLRDVVSMGTGKY------TMGNDLWYGPDRVKYLGPFS 65
++ VI SP LG++ + + + K+ WYG R ++LGP S
Sbjct: 62 TAVKVIANSP-LGESLQRKMEETKQLAVKNSSKFKAQAAKARKQSFWYGQGRPRWLGPIS 120
Query: 66 AQ-TPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 124
PSYL GE PGDYG+D AGL+ DP K E++H RWAML ++G + PE+L+
Sbjct: 121 YDGYPSYLHGELPGDYGFDIAGLAKDPVELQKYFNFEILHARWAMLASVGALIPELLDLL 180
Query: 125 VRVDFKEPVWFKAGSQIFSEGGLDYLGNP--NLVHAQSILAVLGFQVLLMGLVEGFRING 182
F EPVW++ G LDYLG P +L +Q ++ + Q LLM E R G
Sbjct: 181 GVFHFVEPVWWRVGYSKLQGDTLDYLGIPGLHLAGSQGVVVIAICQALLMVGPEYARYCG 240
Query: 183 LPGVGE------GNNLYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQA 236
+ + G+ YPGG FDPL L+ DP F ELKVKEIKNGRLAM + GFF QA
Sbjct: 241 IEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKNGRLAMMAWLGFFTQA 300
Query: 237 IVTGKGPLENLLDHLDDPVANN 258
+TGKGP++N++DH+ DP NN
Sbjct: 301 ALTGKGPVQNIVDHIYDPFHNN 322
>Medtr6g060175.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:20668553-20672457 |
20130731
Length = 289
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 134/210 (63%), Gaps = 9/210 (4%)
Query: 52 WYGPDRVKYLGP---FSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 108
WYGPDR +L ++ P YLTGE PGDYG+D GLS PE FAK + E+IH RWA
Sbjct: 71 WYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWA 130
Query: 109 MLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 168
MLGA G I PE K+ E VWFK G+ + G L+Y G P ++ ++ + +
Sbjct: 131 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPIN---LIVAVVAE 187
Query: 169 VLLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFS 228
V+L+G E +RI G+ + +PGG FDPLGLA+DP A LKVKEIKNGRLAMF+
Sbjct: 188 VVLLGGAEYYRITN--GLELEDKFHPGGP-FDPLGLANDPDQAAILKVKEIKNGRLAMFA 244
Query: 229 MFGFFVQAIVTGKGPLENLLDHLDDPVANN 258
M GFF+QA VTG+GP+ENL HL DP NN
Sbjct: 245 MLGFFIQAYVTGEGPVENLAKHLSDPFGNN 274
>Medtr6g060175.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:20668922-20672420 |
20130731
Length = 279
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 128/210 (60%), Gaps = 19/210 (9%)
Query: 52 WYGPDRVKYLGP---FSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 108
WYGPDR +L ++ P YLTGE PGDYG+D GLS PE FAK WA
Sbjct: 71 WYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAK----------WA 120
Query: 109 MLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 168
MLGA G I PE K+ E VWFK G+ + G L+Y G P ++ ++ + +
Sbjct: 121 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPIN---LIVAVVAE 177
Query: 169 VLLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFS 228
V+L+G E +RI G+ + +PGG FDPLGLA+DP A LKVKEIKNGRLAMF+
Sbjct: 178 VVLLGGAEYYRITN--GLELEDKFHPGGP-FDPLGLANDPDQAAILKVKEIKNGRLAMFA 234
Query: 229 MFGFFVQAIVTGKGPLENLLDHLDDPVANN 258
M GFF+QA VTG+GP+ENL HL DP NN
Sbjct: 235 MLGFFIQAYVTGEGPVENLAKHLSDPFGNN 264
>Medtr5g098785.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:43261216-43258628 |
20130731
Length = 277
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 120/217 (55%), Gaps = 33/217 (15%)
Query: 65 SAQTPSYLTGEFPGDYGWDTAGLSADPEA---FAKNRAL---EVIHGRWAMLGALGCITP 118
S Q+ SYL G PGD+G+D GLS DPE F + R L E+I+GR+AMLGA G I P
Sbjct: 63 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAP 121
Query: 119 EVLEKWVRVDFKEPV-WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGF---------- 167
E+L K + + + WF+ G I G +Y + N +A +GF
Sbjct: 122 EILGKAGLIPAETALPWFQTGV-IPPAGTYNYWAD-NYTLFVMEMAFMGFAEHRRFQDWY 179
Query: 168 ------QVLLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPATFAELKVKEIKN 221
+ +GL +G G G YPGG F+PLG D + ELK+KE+KN
Sbjct: 180 NPGSMGKQYFLGLEKGLG-------GSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKN 232
Query: 222 GRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANN 258
GRLAM ++ G+F+QA+VTG GP +NLLDHL DPV NN
Sbjct: 233 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 269
>Medtr5g098780.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:43257471-43255552 |
20130731
Length = 275
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 119/217 (54%), Gaps = 33/217 (15%)
Query: 65 SAQTPSYLTGEFPGDYGWDTAGLSADPEA---FAKNRAL---EVIHGRWAMLGALGCITP 118
S Q+ SYL G PGD+G+D GLS DPE F + L E+I+GR+AMLGA G I P
Sbjct: 61 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGVGGFIEPEWLAYGEIINGRFAMLGAAGAIAP 119
Query: 119 EVLEKWVRVDFKEPV-WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGF---------- 167
E+L K + + + WF+ G I G +Y + + +A +GF
Sbjct: 120 EILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADNYTLFVME-MAFMGFAEHRRLQDWY 177
Query: 168 ------QVLLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPATFAELKVKEIKN 221
+ +GL +G G G YPGG F+PLG D + ELK+KE+KN
Sbjct: 178 NPGSMGKQYFLGLEKGLG-------GSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKN 230
Query: 222 GRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANN 258
GRLAM ++ G+F+QA+VTG GP +NLLDHL DPV NN
Sbjct: 231 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 267
>Medtr8g023790.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr8:8653598-8650676 |
20130731
Length = 268
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 118/248 (47%), Gaps = 38/248 (15%)
Query: 22 FLGQTKGSNSNTLRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYG 81
FLG+ NSN V T + PDR + + P +L G PGD+G
Sbjct: 32 FLGRKLKVNSNIAAPVRVRSTTTVCAAAE----PDRPLWFP--GSTPPPWLDGSLPGDFG 85
Query: 82 WDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQI 141
+D GLS+DPE+ N E++H RWAMLGA G PE L K + + P W+ AG Q
Sbjct: 86 FDPLGLSSDPESLKWNVQAELVHCRWAMLGAAGIFIPEFLTK-IGI-LNTPSWYTAGEQE 143
Query: 142 FSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGL--PGVGEGNNL------- 192
+ ++ V +++ +G EG R + PG + +
Sbjct: 144 Y------------FTDTTTLFIV---ELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLT 188
Query: 193 -----YPGGQYFDPLGLAD-DPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 246
YPGG +FDPLG P EL+ KEIKNGRLAM ++ G + Q I TG GP++N
Sbjct: 189 GTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDN 248
Query: 247 LLDHLDDP 254
L HL DP
Sbjct: 249 LFAHLADP 256
>Medtr3g101670.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:46810944-46809109 |
20130731
Length = 267
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 107/202 (52%), Gaps = 32/202 (15%)
Query: 69 PSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVD 128
P+YL G PGD+G+D GL DPE+ E++H R+AMLG LG + ++L V
Sbjct: 68 PTYLDGTLPGDFGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVLGILVTDLLR--VAGV 125
Query: 129 FKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGVG- 187
P+WF+AG+ + + +++ V Q+LLMG E R G
Sbjct: 126 NSIPIWFEAGAVKY-----------EFANTGTLVVV---QLLLMGYAETRRYMDFVSPGS 171
Query: 188 ---EGNNL------------YPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGF 232
EG+ YPGG +PLGLA D + E K+KEIKNGRLAM ++ G
Sbjct: 172 QAKEGSFFGLEASLGGLEPGYPGGPLLNPLGLAKDIKSAREWKLKEIKNGRLAMVAILGI 231
Query: 233 FVQAIVTGKGPLENLLDHLDDP 254
FVQA VT GP++NL++HL +P
Sbjct: 232 FVQASVTHVGPIDNLVEHLSNP 253
>Medtr2g042720.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:18633760-18631754 |
20130731
Length = 267
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 105/220 (47%), Gaps = 44/220 (20%)
Query: 55 PDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALG 114
PDR + + P +L G PGD+G+D GL +DPE E++H RWAMLG G
Sbjct: 60 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWLAQAELMHARWAMLGVSG 117
Query: 115 CITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGL 174
+ PE+LEK V K W+ AGS ++Y +P + Q+ LMG
Sbjct: 118 ILIPEILEKIGYV--KNFSWYNAGS-------VEYFADPTTLFI--------VQLALMGW 160
Query: 175 VEGFRI-------------------NGLPGVGEGNNLYPGGQYFDPLGLAD-DPATFAEL 214
VEG R N P VG YPGG +FDP+ P L
Sbjct: 161 VEGRRWADIVNPGSVDIEPKLPNRPNPKPDVG-----YPGGLWFDPMQWGRGSPEPVMVL 215
Query: 215 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDP 254
+ KEIKNGRLAM + GF QA+ G P++NL+ HL DP
Sbjct: 216 RTKEIKNGRLAMLAFLGFCFQAVYVGGSPIDNLMAHLADP 255
>Medtr6g033320.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr6:10652924-10650230 |
20130731
Length = 242
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 41 GTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRAL 100
+ ++TM +D G R PSYL G PGD+G+D L PE + +
Sbjct: 39 ASSRFTMTSDWMPGQPR-----------PSYLDGSAPGDFGFDPLRLGEVPENLERFKES 87
Query: 101 EVIHGRWAMLGALGCITPEV--LEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHA 158
E+IH RWAML G + PE L WV+ W G YLGNP V
Sbjct: 88 ELIHCRWAMLAVPGILVPEALGLGNWVKAQ----EW-----AALPGGQATYLGNP--VPW 136
Query: 159 QSILAVLGFQVLLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPATFAELKVKE 218
++ +L + L + VE R + E YPGG FDPLG + DP F E K+KE
Sbjct: 137 GTLPTILVIEFLSIAFVEHQR--SMEKDPEKKK-YPGGA-FDPLGYSKDPKKFHEYKIKE 192
Query: 219 IKNGRLAMFSMFGFFVQAIV-TGKGPLENLLDHLDDPVANN 258
+KNGRLA+ + G VQ G GPLENL HL DP NN
Sbjct: 193 VKNGRLALLAFVGIVVQQTAYPGTGPLENLATHLADPWHNN 233
>Medtr4g015570.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr4:4673903-4671256 |
20130731
Length = 289
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 107/233 (45%), Gaps = 58/233 (24%)
Query: 66 AQTPSYLTGEFPGDYGWDTAGLSADPE-----------AFAKN----------------- 97
A++P +L G GDYG+D GL E AKN
Sbjct: 61 AKSPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFADVKS 120
Query: 98 ---------------RALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIF 142
R E+IHGRWAML LG +T E L W AG
Sbjct: 121 TPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVEL 172
Query: 143 SEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPL 202
EG YLG P SI ++ +VL++G +E F+ N + LYPGG++FDPL
Sbjct: 173 VEGS-TYLGQPLPF---SITTLIWIEVLVIGYIE-FQRNA--ELDSEKRLYPGGKFFDPL 225
Query: 203 GLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPV 255
GLA DP A L++ EIK+ RLAM + GF VQA TGKGPL N HL DP+
Sbjct: 226 GLASDPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 278
>Medtr3g435460.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:11610138-11613272 |
20130731
Length = 253
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 98/204 (48%), Gaps = 36/204 (17%)
Query: 68 TPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRV 127
+P YLTG PGD G+D GL+ DPE E+++GRWAMLG G + PEV +
Sbjct: 62 SPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGII 121
Query: 128 DFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGVG 187
+ P W+ AG + +Y + S L V+ F +L VE R + G
Sbjct: 122 NV--PKWYDAGKE-------EYFA------SSSTLFVIEF--ILFHYVEIRRWQDIKNPG 164
Query: 188 EGNNL--------------YPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFF 233
N YPGG F+PL A E K KEI NGRLAM + GF
Sbjct: 165 SVNQDPIFKQYSLPKGEVGYPGG-IFNPLNFAPT----LEAKEKEIANGRLAMLAFLGFI 219
Query: 234 VQAIVTGKGPLENLLDHLDDPVAN 257
+Q VTGKGP +NLL HL DP N
Sbjct: 220 IQHNVTGKGPFDNLLQHLSDPWHN 243
>Medtr1g026550.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr1:8659686-8662520 |
20130731
Length = 241
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 12 SSGTVIKPSPFLGQTKGSNSNTLRDVVSMGTGKY------TMGNDLWYGPDRVKYLGPFS 65
++ VI SP LG++ + + + K+ WYG R ++LGP S
Sbjct: 62 TAVKVIANSP-LGESLQRKMEETKQLAVKNSSKFKAQAAKARKQSFWYGQGRPRWLGPIS 120
Query: 66 AQ-TPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW 124
PSYL GE PGDYG+D AGL+ DP K E++H RWAML ++G + PE+L+
Sbjct: 121 YDGYPSYLHGELPGDYGFDIAGLAKDPVELQKYFNFEILHARWAMLASVGALIPELLDLL 180
Query: 125 VRVDFKEPVWFKAGSQIFSEGGLDYLGNP--NLVHAQSILAVLGFQVLLMGLV 175
F EPVW++ G LDYLG P +L +Q ++ + Q LLM ++
Sbjct: 181 GVFHFVEPVWWRVGYSKLQGDTLDYLGIPGLHLAGSQGVVVIAICQALLMVML 233
>Medtr3g435460.2 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:11611493-11613272 |
20130731
Length = 192
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 92/196 (46%), Gaps = 36/196 (18%)
Query: 76 FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWF 135
PGD G+D GL+ DPE E+++GRWAMLG G + PEV ++ P W+
Sbjct: 9 LPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIINV--PKWY 66
Query: 136 KAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGVGEGNNL--- 192
AG + +Y + S L V+ F +L VE R + G N
Sbjct: 67 DAGKE-------EYFA------SSSTLFVIEF--ILFHYVEIRRWQDIKNPGSVNQDPIF 111
Query: 193 -----------YPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 241
YPGG F+PL A E K KEI NGRLAM + GF +Q VTGK
Sbjct: 112 KQYSLPKGEVGYPGG-IFNPLNFAPT----LEAKEKEIANGRLAMLAFLGFIIQHNVTGK 166
Query: 242 GPLENLLDHLDDPVAN 257
GP +NLL HL DP N
Sbjct: 167 GPFDNLLQHLSDPWHN 182
>Medtr3g070340.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr3:31536436-31533674 |
20130731
Length = 278
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 80/149 (53%), Gaps = 15/149 (10%)
Query: 96 KNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNL 155
+ R EVIHGRWAMLGALG + E F W AG EG Y G
Sbjct: 137 RFRECEVIHGRWAMLGALGALAVEA--------FTGVAWQDAGKVELVEGS-SYFG---F 184
Query: 156 VHAQSILAVLGFQVLLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPATFAELK 215
SI ++ +VL++G +E F+ N + LYPGG++FDPLGLA DP L+
Sbjct: 185 SLPFSISTLIWIEVLVIGYIE-FQRNA--ELDPEKRLYPGGKFFDPLGLASDPEEKERLQ 241
Query: 216 VKEIKNGRLAMFSMFGFFVQAIVTGKGPL 244
+ EIK+ RLAM F +QA VTGKGP+
Sbjct: 242 LAEIKHSRLAMVVFLIFAIQAAVTGKGPI 270
>Medtr2g008610.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:1552950-1554469 |
20130731
Length = 261
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 91/208 (43%), Gaps = 50/208 (24%)
Query: 69 PSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVD 128
P +L G PGD+G+D GL DP R E+IHGRWAM LG V + W V
Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIF---VGQAWSGVP 129
Query: 129 FKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRIN------- 181
WF+AG+ +PN + S +LG Q++LMG VE R
Sbjct: 130 -----WFEAGA------------DPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDS 172
Query: 182 -----GLPGVGEGNNL--------YPGGQYFDPLGLAD---------DPATFAELKVKEI 219
P N YPGG++FDPL LA D LK+ EI
Sbjct: 173 QSIEWATPWSKTAENFANATGEQGYPGGKFFDPLSLAGTIENGVYIPDTEKLERLKLAEI 232
Query: 220 KNGRLAMFSMFGFFVQAIVTGKGPLENL 247
K+ RLAM +M F+ +A GK PL L
Sbjct: 233 KHARLAMLAMLIFYFEA-GQGKTPLGAL 259
>Medtr5g098770.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr5:43247918-43247634 |
20130731
Length = 94
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 187 GEGNNLYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 246
G G YPGG F+PLG D + +LK+KE+KNGRLAM ++ G+FVQA+VT GP +N
Sbjct: 15 GSGEPAYPGGPIFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTRVGPYQN 74
Query: 247 LLDHLDDPVANNAWVYATKF 266
L+HL DP +NN + + KF
Sbjct: 75 FLNHLADP-SNNNILTSLKF 93
>Medtr2g436960.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | chr2:14456001-14454918 |
20130731
Length = 102
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 193 YPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD 252
YP G F+PL A E K KEI NGRLAM + GF Q VTGKG +NLL+HL
Sbjct: 33 YPSG-IFNPLNFAPT----LEAKEKEISNGRLAMLAFLGFISQHNVTGKGRFDNLLEHLS 87
Query: 253 DPVAN 257
DP N
Sbjct: 88 DPWHN 92
>Medtr0003s0060.1 | light-harvesting complex I chlorophyll
A/B-binding protein | HC | scaffold0003:35090-34151 |
20130731
Length = 95
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 207 DPATFA---ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVAN 257
+P FA E K KEI NGRLA+ + GF Q V GKG +NLL HL DP N
Sbjct: 32 NPLNFAPTLEAKEKEISNGRLALLAFLGFISQHKVAGKGRFDNLLQHLSDPWHN 85