Miyakogusa Predicted Gene

Lj3g3v0679240.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0679240.2 Non Characterized Hit- tr|D7MEG1|D7MEG1_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,52.27,3e-17,
,CUFF.41096.2
         (84 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g080290.2 | transmembrane protein, putative | HC | chr2:33...   149   7e-37
Medtr2g080290.3 | transmembrane protein, putative | HC | chr2:33...   149   7e-37
Medtr2g080290.1 | transmembrane protein, putative | HC | chr2:33...   149   7e-37

>Medtr2g080290.2 | transmembrane protein, putative | HC |
           chr2:33898613-33894203 | 20130731
          Length = 239

 Score =  149 bits (375), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 70/84 (83%), Positives = 78/84 (92%)

Query: 1   MQGTCPNCGNDFQVFKSTLNDDLQLCPYCGQPFSVVGNEFVKDSVKFSNQSTTFGQAFNN 60
           M+GTCPNCGNDFQVFKSTLN++LQLCP+CGQPFSV GNEFVK+ V FSNQSTTFGQAF+N
Sbjct: 156 MKGTCPNCGNDFQVFKSTLNEELQLCPFCGQPFSVDGNEFVKEPVNFSNQSTTFGQAFDN 215

Query: 61  FSRSSNEKDSGRAIDVEAEIMDAD 84
           FS S N+KDSG+AIDVEAEI DAD
Sbjct: 216 FSSSKNDKDSGKAIDVEAEIKDAD 239


>Medtr2g080290.3 | transmembrane protein, putative | HC |
           chr2:33898613-33894407 | 20130731
          Length = 239

 Score =  149 bits (375), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 70/84 (83%), Positives = 78/84 (92%)

Query: 1   MQGTCPNCGNDFQVFKSTLNDDLQLCPYCGQPFSVVGNEFVKDSVKFSNQSTTFGQAFNN 60
           M+GTCPNCGNDFQVFKSTLN++LQLCP+CGQPFSV GNEFVK+ V FSNQSTTFGQAF+N
Sbjct: 156 MKGTCPNCGNDFQVFKSTLNEELQLCPFCGQPFSVDGNEFVKEPVNFSNQSTTFGQAFDN 215

Query: 61  FSRSSNEKDSGRAIDVEAEIMDAD 84
           FS S N+KDSG+AIDVEAEI DAD
Sbjct: 216 FSSSKNDKDSGKAIDVEAEIKDAD 239


>Medtr2g080290.1 | transmembrane protein, putative | HC |
           chr2:33898613-33894169 | 20130731
          Length = 239

 Score =  149 bits (375), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 70/84 (83%), Positives = 78/84 (92%)

Query: 1   MQGTCPNCGNDFQVFKSTLNDDLQLCPYCGQPFSVVGNEFVKDSVKFSNQSTTFGQAFNN 60
           M+GTCPNCGNDFQVFKSTLN++LQLCP+CGQPFSV GNEFVK+ V FSNQSTTFGQAF+N
Sbjct: 156 MKGTCPNCGNDFQVFKSTLNEELQLCPFCGQPFSVDGNEFVKEPVNFSNQSTTFGQAFDN 215

Query: 61  FSRSSNEKDSGRAIDVEAEIMDAD 84
           FS S N+KDSG+AIDVEAEI DAD
Sbjct: 216 FSSSKNDKDSGKAIDVEAEIKDAD 239