Miyakogusa Predicted Gene

Lj3g3v0669210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0669210.1 Non Characterized Hit- tr|I3SZI7|I3SZI7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,88.64,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.41099.1
         (176 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g080260.1 | root cap/late embryogenesis related | HC | chr...   270   4e-73
Medtr2g080230.1 | root cap/late embryogenesis related | HC | chr...   268   2e-72
Medtr8g464300.1 | root cap/late embryogenesis related | HC | chr...   241   3e-64
Medtr4g059670.1 | root cap/late embryogenesis related | HC | chr...   146   9e-36
Medtr4g059630.1 | root cap/late embryogenesis related | HC | chr...   141   4e-34
Medtr2g030845.1 | late embryogenesis abundant (LEA)-like protein...   124   4e-29
Medtr2g030825.1 | late embryogenesis abundant (LEA)-like protein...   124   5e-29
Medtr2g030835.1 | root cap/late embryogenesis related | HC | chr...   123   1e-28
Medtr2g021580.1 | root cap/late embryogenesis related | HC | chr...   122   2e-28

>Medtr2g080260.1 | root cap/late embryogenesis related | HC |
           chr2:33879944-33878075 | 20130731
          Length = 341

 Score =  270 bits (691), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 122/144 (84%), Positives = 132/144 (91%)

Query: 33  DTQTCTNRKSQCFLKKIPCPHECPLKSPSNPKAKVCYVDCDSPMCKASCKSPKPNCNGRG 92
           DTQTCTNRKS+CFLKK+PCP +CP +SP+NP+ KVCY+DCDSPMCK  CKS K NCNGRG
Sbjct: 30  DTQTCTNRKSRCFLKKLPCPAQCPSRSPANPREKVCYLDCDSPMCKTQCKSRKANCNGRG 89

Query: 93  SACLDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGI 152
           SACLDPRFVGADGIVFYFHGRR+EHFSLVSD NLQINARFIGLRP GRPRDYTWIQALG+
Sbjct: 90  SACLDPRFVGADGIVFYFHGRRNEHFSLVSDTNLQINARFIGLRPQGRPRDYTWIQALGV 149

Query: 153 LFDSHKFSVEATPSGIWDDEVDRL 176
           LFDSH FS+EATPS IWDDEVD L
Sbjct: 150 LFDSHNFSIEATPSSIWDDEVDHL 173


>Medtr2g080230.1 | root cap/late embryogenesis related | HC |
           chr2:33875585-33873975 | 20130731
          Length = 341

 Score =  268 bits (684), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 122/144 (84%), Positives = 132/144 (91%)

Query: 33  DTQTCTNRKSQCFLKKIPCPHECPLKSPSNPKAKVCYVDCDSPMCKASCKSPKPNCNGRG 92
           DTQTCTNRKS+CFLKK+PCP +CP +SP+NPK KVCY+DCDSP+CK  CKS KPNCNGRG
Sbjct: 30  DTQTCTNRKSRCFLKKLPCPAQCPSRSPANPKDKVCYLDCDSPVCKTQCKSRKPNCNGRG 89

Query: 93  SACLDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGI 152
           SACLDPRFVGADGIVFYFHGRR+EHFSLVSDVNLQINARFIGLRP  RPRDYTWIQALG+
Sbjct: 90  SACLDPRFVGADGIVFYFHGRRNEHFSLVSDVNLQINARFIGLRPQRRPRDYTWIQALGV 149

Query: 153 LFDSHKFSVEATPSGIWDDEVDRL 176
           LFDSH FS+EATPS  WDDEVD L
Sbjct: 150 LFDSHNFSIEATPSSSWDDEVDHL 173


>Medtr8g464300.1 | root cap/late embryogenesis related | HC |
           chr8:22720266-22717548 | 20130731
          Length = 341

 Score =  241 bits (615), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 110/144 (76%), Positives = 122/144 (84%)

Query: 33  DTQTCTNRKSQCFLKKIPCPHECPLKSPSNPKAKVCYVDCDSPMCKASCKSPKPNCNGRG 92
           D  +C  RKS CF KKI CP ECPLKSPS+P AK+C +DC SP+CKA CK  KPNCNGRG
Sbjct: 30  DNVSCNFRKSPCFTKKIQCPAECPLKSPSDPNAKICSLDCASPVCKAQCKQSKPNCNGRG 89

Query: 93  SACLDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGI 152
           SACLDPRFVGADGIVFYFHGR +EHF+LVSD N+QINARFIGLRP GR RDYTWIQALGI
Sbjct: 90  SACLDPRFVGADGIVFYFHGRSNEHFTLVSDPNVQINARFIGLRPEGRTRDYTWIQALGI 149

Query: 153 LFDSHKFSVEATPSGIWDDEVDRL 176
           LF+SHKF+VEAT + IW DE+D L
Sbjct: 150 LFESHKFTVEATKAAIWKDEIDHL 173


>Medtr4g059670.1 | root cap/late embryogenesis related | HC |
           chr4:22009293-22011297 | 20130731
          Length = 395

 Score =  146 bits (369), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 67/137 (48%), Positives = 92/137 (67%), Gaps = 3/137 (2%)

Query: 41  KSQCFLKKIPCPHECPLKSPSNPKAKV-CYVDCDSPMCKASCKSPKPNCNGRGSACLDPR 99
           ++ C  K + CP EC  + P   K    C++DC+   C+A+CK  +PNC+G GS C DPR
Sbjct: 112 QNTCHFKTLVCPEECKQRKPKKNKKDKGCFIDCNK--CEATCKFRRPNCDGYGSLCYDPR 169

Query: 100 FVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGILFDSHKF 159
           FVG DG++FYFHG +  +F++VSD + QINA FIG RP GR RDYTW+QAL ++FD+H  
Sbjct: 170 FVGGDGVMFYFHGAKGGNFAIVSDDDFQINAHFIGTRPQGRTRDYTWVQALSVMFDTHTL 229

Query: 160 SVEATPSGIWDDEVDRL 176
            + A     W+D+VD L
Sbjct: 230 VIAANRVTQWNDKVDSL 246


>Medtr4g059630.1 | root cap/late embryogenesis related | HC |
           chr4:21991918-21993963 | 20130731
          Length = 386

 Score =  141 bits (355), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 66/134 (49%), Positives = 86/134 (64%), Gaps = 2/134 (1%)

Query: 44  CFLKKIPCPHECPLKSPSNPKAKV-CYVDCDSPMCKASCKSPKPNCNGRGSACLDPRFVG 102
           C    + CP EC  + P   K    C++DC S  C+A+CK  + NC+G GS C DPRFVG
Sbjct: 105 CHFATLVCPAECKTRKPKKNKKDKGCFIDCSSK-CEATCKFRRANCDGYGSLCYDPRFVG 163

Query: 103 ADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGILFDSHKFSVE 162
            DG++FYFHG +  +F++VSD   QINA FIG RP GR RDYTW+QAL ++FD+H   + 
Sbjct: 164 GDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALSLMFDTHTLVIA 223

Query: 163 ATPSGIWDDEVDRL 176
           A     W+D VD L
Sbjct: 224 ANRVTQWNDNVDSL 237


>Medtr2g030845.1 | late embryogenesis abundant (LEA)-like protein |
           LC | chr2:11667751-11669978 | 20130731
          Length = 596

 Score =  124 bits (311), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 85/144 (59%), Gaps = 17/144 (11%)

Query: 34  TQTCTNRK-SQCFLKKIPCPHECPLKSPSNPKAKVCYVDCDSPMCKASCKSPKPNCNGRG 92
           T  C N+   +C+  +  CP+ C            C VDC++  CK  CK  KP     G
Sbjct: 301 TARCGNKNYPKCYNMEHACPNAC---------RGGCEVDCNT--CKPICKCDKP-----G 344

Query: 93  SACLDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGI 152
           + C DPRF+G DGI FYFHG++D +F LVSD NL INA FIG R     RD+TW+Q++ I
Sbjct: 345 AVCQDPRFIGGDGITFYFHGKKDNNFCLVSDKNLHINAHFIGRRNENMKRDFTWVQSIVI 404

Query: 153 LFDSHKFSVEATPSGIWDDEVDRL 176
           LFD+H+  + A  +  WDD VDRL
Sbjct: 405 LFDNHQLFLGAQKTATWDDSVDRL 428


>Medtr2g030825.1 | late embryogenesis abundant (LEA)-like protein |
           LC | chr2:11653982-11656243 | 20130731
          Length = 595

 Score =  124 bits (311), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 85/144 (59%), Gaps = 17/144 (11%)

Query: 34  TQTCTNRK-SQCFLKKIPCPHECPLKSPSNPKAKVCYVDCDSPMCKASCKSPKPNCNGRG 92
           T  C N+   +C+  +  CP+ C            C VDC++  CK  CK  KP     G
Sbjct: 300 TARCGNKNYPKCYNMEHACPNAC---------RGGCEVDCNT--CKPICKCDKP-----G 343

Query: 93  SACLDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGI 152
           + C DPRF+G DGI FYFHG++D +F LVSD NL INA FIG R     RD+TW+Q++ I
Sbjct: 344 AVCQDPRFIGGDGITFYFHGKKDNNFCLVSDKNLHINAHFIGRRNENMKRDFTWVQSIVI 403

Query: 153 LFDSHKFSVEATPSGIWDDEVDRL 176
           LFD+H+  + A  +  WDD VDRL
Sbjct: 404 LFDNHQLFLGAQKTATWDDSVDRL 427


>Medtr2g030835.1 | root cap/late embryogenesis related | HC |
           chr2:11663347-11664765 | 20130731
          Length = 330

 Score =  123 bits (308), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/142 (45%), Positives = 81/142 (57%), Gaps = 17/142 (11%)

Query: 36  TCTNRK-SQCFLKKIPCPHECPLKSPSNPKAKVCYVDCDSPMCKASCKSPKPNCNGRGSA 94
           TC  +K   C+     CP  CP           C V+C S  CK  C   KP     G+ 
Sbjct: 37  TCKIKKYKHCYNSVHVCPKSCPYD---------CTVECAS--CKPICTCDKP-----GAV 80

Query: 95  CLDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGILF 154
           C DPRF+G DGI FYFHG++D +F LVSD NL INA FIG R     RD+TW+Q++ ILF
Sbjct: 81  CQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGRRNENMKRDFTWVQSIVILF 140

Query: 155 DSHKFSVEATPSGIWDDEVDRL 176
           D+H+  + A  +  WDD VDRL
Sbjct: 141 DNHQLFLGAQKTSTWDDSVDRL 162


>Medtr2g021580.1 | root cap/late embryogenesis related | HC |
           chr2:7345117-7343803 | 20130731
          Length = 331

 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 77/134 (57%), Gaps = 16/134 (11%)

Query: 43  QCFLKKIPCPHECPLKSPSNPKAKVCYVDCDSPMCKASCKSPKPNCNGRGSACLDPRFVG 102
            C+     CP  CP           C V+C S  CK  C   KP     G+ C DPRF+G
Sbjct: 46  HCYNMVHACPKSCPYD---------CTVECAS--CKPICSCDKP-----GAVCQDPRFIG 89

Query: 103 ADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGILFDSHKFSVE 162
            DGI FYFHG++D +F LVSD NL INA FIG R     RD+TW+Q++ ILFD+H+  + 
Sbjct: 90  GDGITFYFHGKKDNNFCLVSDNNLHINAHFIGRRNKNMKRDFTWVQSIVILFDNHQLFLG 149

Query: 163 ATPSGIWDDEVDRL 176
           A  +  WDD VDRL
Sbjct: 150 AKKTSTWDDSVDRL 163