Miyakogusa Predicted Gene
- Lj3g3v0662800.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0662800.1 Non Characterized Hit- tr|I1M3B4|I1M3B4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41099 PE,83.33,4e-16,
,79454_g.1
(254 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g079740.1 | transducin/WD-like repeat-protein | HC | chr2:... 311 4e-85
Medtr8g100005.1 | transducin/WD40 repeat protein | HC | chr8:423... 110 1e-24
Medtr8g100005.2 | transducin/WD40 repeat protein | HC | chr8:423... 110 1e-24
Medtr8g100005.3 | transducin/WD40 repeat protein | HC | chr8:423... 110 2e-24
Medtr1g007740.1 | transducin/WD40 repeat protein | HC | chr1:529... 108 5e-24
Medtr7g060420.1 | transducin/WD-like repeat-protein | HC | chr7:... 106 2e-23
Medtr3g491920.1 | transducin/WD40 repeat protein | HC | chr3:418... 102 4e-22
Medtr3g095780.1 | transducin/WD-like repeat-protein | HC | chr3:... 75 9e-14
Medtr8g092890.1 | transducin/WD-like repeat-protein | HC | chr8:... 72 6e-13
>Medtr2g079740.1 | transducin/WD-like repeat-protein | HC |
chr2:33593874-33587864 | 20130731
Length = 858
Score = 311 bits (797), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 157/205 (76%), Positives = 165/205 (80%), Gaps = 2/205 (0%)
Query: 50 WLKSIKSVASSMAGHKXXXXXXXXXXXXXKGGRRSSSATDDSQDGTFHGPERLRVRQYGK 109
WLKSIKSVASSMAGHK KGGRRSSSATDDSQDG+FHGPER+RVRQYGK
Sbjct: 299 WLKSIKSVASSMAGHKERRSSDERDTSSEKGGRRSSSATDDSQDGSFHGPERVRVRQYGK 358
Query: 110 SCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLLME 169
SCKE+TALYKSQEIQAH GSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLLME
Sbjct: 359 SCKELTALYKSQEIQAHNGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLLME 418
Query: 170 KPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQLVVPENVFG 229
K EDV+VNMLF +NGSPEPA LSP D E MSLDQ VVPE+VF
Sbjct: 419 KQEDVNVNMLFLVNGSPEPAT--LSPLADNLLERKRKGRSSVSRKSMSLDQFVVPEHVFA 476
Query: 230 LTEKPICSFQGHLHDVLDLSWSKSQ 254
LTEKP+CSF+GHL DVLDLSWSKSQ
Sbjct: 477 LTEKPVCSFKGHLDDVLDLSWSKSQ 501
>Medtr8g100005.1 | transducin/WD40 repeat protein | HC |
chr8:42372817-42368175 | 20130731
Length = 714
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 89/153 (58%), Gaps = 10/153 (6%)
Query: 101 RLRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESE 160
R+RV + K KE+++LY QE +AH G I ++KFSLDGKYLAS GED ++ VWQVVE+E
Sbjct: 241 RVRVHPHKKRVKELSSLYTEQEFKAHKGVILTMKFSLDGKYLASGGEDGIVRVWQVVENE 300
Query: 161 RKGELLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQ 220
R EL +++ N+ F +N ++P LD++ + +
Sbjct: 301 RSNELNILDNDPS---NIYFKMN----QFTGCVAP-LDVDKDKLVKTEKLRKSSASTC-- 350
Query: 221 LVVPENVFGLTEKPICSFQGHLHDVLDLSWSKS 253
+++P F + KP+ FQGH D+LDL+WSKS
Sbjct: 351 VIIPPKTFRILVKPLHEFQGHSDDILDLAWSKS 383
>Medtr8g100005.2 | transducin/WD40 repeat protein | HC |
chr8:42372817-42368175 | 20130731
Length = 714
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 89/153 (58%), Gaps = 10/153 (6%)
Query: 101 RLRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESE 160
R+RV + K KE+++LY QE +AH G I ++KFSLDGKYLAS GED ++ VWQVVE+E
Sbjct: 241 RVRVHPHKKRVKELSSLYTEQEFKAHKGVILTMKFSLDGKYLASGGEDGIVRVWQVVENE 300
Query: 161 RKGELLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQ 220
R EL +++ N+ F +N ++P LD++ + +
Sbjct: 301 RSNELNILDNDPS---NIYFKMN----QFTGCVAP-LDVDKDKLVKTEKLRKSSASTC-- 350
Query: 221 LVVPENVFGLTEKPICSFQGHLHDVLDLSWSKS 253
+++P F + KP+ FQGH D+LDL+WSKS
Sbjct: 351 VIIPPKTFRILVKPLHEFQGHSDDILDLAWSKS 383
>Medtr8g100005.3 | transducin/WD40 repeat protein | HC |
chr8:42372817-42370425 | 20130731
Length = 500
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 89/153 (58%), Gaps = 10/153 (6%)
Query: 101 RLRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESE 160
R+RV + K KE+++LY QE +AH G I ++KFSLDGKYLAS GED ++ VWQVVE+E
Sbjct: 241 RVRVHPHKKRVKELSSLYTEQEFKAHKGVILTMKFSLDGKYLASGGEDGIVRVWQVVENE 300
Query: 161 RKGELLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQ 220
R EL +++ N+ F +N ++P LD++ + +
Sbjct: 301 RSNELNILDNDPS---NIYFKMN----QFTGCVAP-LDVDKDKLVKTEKLRKSSASTC-- 350
Query: 221 LVVPENVFGLTEKPICSFQGHLHDVLDLSWSKS 253
+++P F + KP+ FQGH D+LDL+WSKS
Sbjct: 351 VIIPPKTFRILVKPLHEFQGHSDDILDLAWSKS 383
>Medtr1g007740.1 | transducin/WD40 repeat protein | HC |
chr1:529208-533085 | 20130731
Length = 784
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 87/155 (56%), Gaps = 11/155 (7%)
Query: 100 ERLRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVES 159
+R++VRQ K KE++ALY Q+IQAH G I+++KFS DG+YLASAGED ++ +WQVVE
Sbjct: 232 QRVKVRQCKKQRKELSALYMGQDIQAHEGPIFTMKFSPDGQYLASAGEDGIVRLWQVVED 291
Query: 160 ERKGELLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLD 219
ER E+ + PE + + F +N E + N +
Sbjct: 292 ERHNEI---DIPEVDTSCIYFTVNDLSELTPLFMDKDKITNVKTLKKTSDSAC------- 341
Query: 220 QLVVPENVFGLTEKPICSFQGHLHDVLDLSWSKSQ 254
++ P VF L EKP+ F GH ++LDLSWSK+
Sbjct: 342 -IIFPPKVFRLMEKPLHEFHGHGGEILDLSWSKNN 375
>Medtr7g060420.1 | transducin/WD-like repeat-protein | HC |
chr7:21831049-21825202 | 20130731
Length = 1049
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 87/160 (54%), Gaps = 34/160 (21%)
Query: 102 LRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESE- 160
++VRQ GKS KE++AL+ QE QAH G IW++KFSLDG++LA+AGED VIH+W+V E E
Sbjct: 392 VKVRQSGKSQKELSALHLCQEFQAHEGCIWTMKFSLDGRFLATAGEDKVIHIWEVQECEV 451
Query: 161 --RKGE-----------LLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXX 207
+GE L ME+ ++V + L G + G PE
Sbjct: 452 MSMRGEEGNLTPIHPSLLSSMEREKNVDTHSLVKKKGK---FGSKRGGGSAAIPEY---- 504
Query: 208 XXXXXXXXMSLDQLVVPENVFGLTEKPICSFQGHLHDVLD 247
+ VPENVF +EKP CSF GHL +VLD
Sbjct: 505 -------------VHVPENVFTFSEKPYCSFHGHLDEVLD 531
>Medtr3g491920.1 | transducin/WD40 repeat protein | HC |
chr3:41863790-41858899 | 20130731
Length = 702
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 11/153 (7%)
Query: 100 ERLRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVES 159
++++VRQ K KE+++LY Q+IQAH G+I ++KFS DG+YLA+ GED V+ VWQVVE
Sbjct: 221 QKVKVRQCRKKMKELSSLYLRQDIQAHEGAILTMKFSPDGQYLATGGEDGVVRVWQVVEE 280
Query: 160 ERKGELLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLD 219
+R E+ + PE ++ F +N + L+P L ++ E +
Sbjct: 281 DRCNEIHI---PEIDPSSIYFTVNN-----LSQLTP-LFMDKEKLGQLKSMRKTADSAC- 330
Query: 220 QLVVPENVFGLTEKPICSFQGHLHDVLDLSWSK 252
+V P +F L EKP+ F+GH +VLDLSWSK
Sbjct: 331 -VVFPPKIFRLLEKPLHEFRGHRSEVLDLSWSK 362
>Medtr3g095780.1 | transducin/WD-like repeat-protein | HC |
chr3:43759973-43764907 | 20130731
Length = 628
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 28/150 (18%)
Query: 101 RLRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESE 160
++ VR KS + +A+Y QEI+AH G IW++KFS +G+YLA+ GED V+ +W V S
Sbjct: 168 QINVRHNKKSWNQFSAVYTGQEIRAHKGLIWTMKFSPNGQYLATGGEDGVVRIW-CVSSL 226
Query: 161 RKGELLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQ 220
+ + ++ D+S + ++ SP+ ++ +P
Sbjct: 227 KASSICFAKEDRDIS-KLKHDMSFSPKKCSS-KTPA------------------------ 260
Query: 221 LVVPENVFGLTEKPICSFQGHLHDVLDLSW 250
V+P + + E P+ GH DV+DL+W
Sbjct: 261 -VLPRKILKIEESPLQELYGHSSDVMDLAW 289
>Medtr8g092890.1 | transducin/WD-like repeat-protein | HC |
chr8:38951241-38954817 | 20130731
Length = 645
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 54/153 (35%)
Query: 101 RLRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESE 160
R++V+Q K E + +Y QEI+AH G IW++KFS +G+YLAS GED V+ +W+V
Sbjct: 204 RVKVKQNKKRWMEFSEVYIGQEIRAHKGLIWTMKFSPNGQYLASGGEDGVVRIWRV---- 259
Query: 161 RKGELLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQ 220
F N S P +L
Sbjct: 260 -------------------FSRNKSHPPFVSL---------------------------- 272
Query: 221 LVVPENVFGLTEKPICSFQGHLHDVLDLSWSKS 253
P ++F + E P+ GH D+LDL+WS S
Sbjct: 273 ---PNDIFQIEESPLQELFGHSSDILDLAWSNS 302