Miyakogusa Predicted Gene

Lj3g3v0642540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0642540.1 Non Characterized Hit- tr|A9NPM0|A9NPM0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,32.89,1e-17,seg,NULL; EF_HAND_2,EF-HAND 2; no
description,EF-hand-like domain,CUFF.41062.1
         (167 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g009870.1 | calcium-binding EF hand protein | HC | chr8:24...   240   5e-64
Medtr8g009870.2 | calcium-binding EF hand protein | HC | chr8:24...   223   9e-59

>Medtr8g009870.1 | calcium-binding EF hand protein | HC |
           chr8:2446438-2450029 | 20130731
          Length = 166

 Score =  240 bits (612), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 112/163 (68%), Positives = 133/163 (81%)

Query: 1   MGQVFDKLQGKDWREKQIRKITDRVFERVKSQMQTNNLCFEELYIAVLLVYNDINKYIPG 60
           MGQ+FDKLQG++WR+KQIRKITDRVF+ V++Q+QT  L FE+LYIAVLLVYNDINK IPG
Sbjct: 1   MGQIFDKLQGEEWRKKQIRKITDRVFQNVRNQVQTEYLSFEDLYIAVLLVYNDINKIIPG 60

Query: 61  PHFDPPSKEKVREVMKNCDINFDGEIDPEEFYSFIQIMTADTVTFVGQKLIITLXXXXXX 120
           PHFDPPSKE V+++M+ CD+N DG ID +EF  FIQ MTADT T V QKLIITL      
Sbjct: 61  PHFDPPSKETVKQIMQECDMNLDGAIDHDEFCDFIQKMTADTFTVVSQKLIITLVVAPSV 120

Query: 121 XXXTKKATEGVPGVGKLVQRLPNSVYASLVTLAAVWFQNAAQD 163
              TK+ATEGVPGVGK+VQ+LPN++YASLVTLA VWFQ    +
Sbjct: 121 AMATKRATEGVPGVGKVVQKLPNAIYASLVTLAVVWFQKMGDE 163


>Medtr8g009870.2 | calcium-binding EF hand protein | HC |
           chr8:2446438-2450029 | 20130731
          Length = 162

 Score =  223 bits (567), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 104/149 (69%), Positives = 123/149 (82%)

Query: 10  GKDWREKQIRKITDRVFERVKSQMQTNNLCFEELYIAVLLVYNDINKYIPGPHFDPPSKE 69
           G++WR+KQIRKITDRVF+ V++Q+QT  L FE+LYIAVLLVYNDINK IPGPHFDPPSKE
Sbjct: 6   GEEWRKKQIRKITDRVFQNVRNQVQTEYLSFEDLYIAVLLVYNDINKIIPGPHFDPPSKE 65

Query: 70  KVREVMKNCDINFDGEIDPEEFYSFIQIMTADTVTFVGQKLIITLXXXXXXXXXTKKATE 129
            V+++M+ CD+N DG ID +EF  FIQ MTADT T V QKLIITL         TK+ATE
Sbjct: 66  TVKQIMQECDMNLDGAIDHDEFCDFIQKMTADTFTVVSQKLIITLVVAPSVAMATKRATE 125

Query: 130 GVPGVGKLVQRLPNSVYASLVTLAAVWFQ 158
           GVPGVGK+VQ+LPN++YASLVTLA VWFQ
Sbjct: 126 GVPGVGKVVQKLPNAIYASLVTLAVVWFQ 154