Miyakogusa Predicted Gene

Lj3g3v0642440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0642440.1 Non Characterized Hit- tr|D7MHX0|D7MHX0_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,77.94,5e-16,no
description,NULL,gene.g45758.t1.1
         (71 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g009780.1 | hypothetical protein | HC | chr8:2416091-23880...   129   4e-31

>Medtr8g009780.1 | hypothetical protein | HC |
          chr8:2416091-2388008 | 20130731
          Length = 2158

 Score =  129 bits (325), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 62/71 (87%), Positives = 66/71 (92%)

Query: 1  MSRESPSQKALHVLDTDLRSHWSTATNTKEWILLELNEPCLLSHIRIHNKSVLEWEIAVG 60
          MSRESPSQKAL+VLD+DLRSHWSTATNTKEWILLELNEPCLLSHIRI+NKSVLEWEIAVG
Sbjct: 19 MSRESPSQKALNVLDSDLRSHWSTATNTKEWILLELNEPCLLSHIRIYNKSVLEWEIAVG 78

Query: 61 LRYKVRRLKCV 71
          LRYK    + V
Sbjct: 79 LRYKPETFQKV 89