Miyakogusa Predicted Gene

Lj3g3v0614830.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0614830.1 Non Characterized Hit- tr|K4AVR6|K4AVR6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,30.22,7e-17,seg,NULL,
NODE_41396_length_1696_cov_51.495872.path2.1
         (462 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g009290.1 | pigment defective 320 protein, putative | HC |...   611   e-175
Medtr2g035830.1 | pigment defective 320 protein | HC | chr2:1520...   254   1e-67

>Medtr8g009290.1 | pigment defective 320 protein, putative | HC |
           chr8:2111759-2106435 | 20130731
          Length = 465

 Score =  611 bits (1576), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 311/471 (66%), Positives = 353/471 (74%), Gaps = 15/471 (3%)

Query: 1   MAKLRTAIDSAFWDLNIASPQSLDGWAKAVPGDPIPLDGSVASKALRPQQFSFFKNNSFP 60
           MAKLRTAIDS+FWDLNI+SPQ+LDGWAK VPGDPIPLD SV+S+  R QQ      + FP
Sbjct: 1   MAKLRTAIDSSFWDLNISSPQNLDGWAKFVPGDPIPLDASVSSRLYRHQQLPHITPH-FP 59

Query: 61  LPVIPSFSPTSPKDLGSFALQSLLLRLTSHRWWLGVTGQFRPRKLITDIKNEITNADEFD 120
             +IPS  P+  K+ GSF+LQSLLL  T  RWWL  TGQFRPRK+I DIKNEI NA EF+
Sbjct: 60  FGIIPSSVPSPKKEHGSFSLQSLLLDFTGPRWWLAATGQFRPRKMIVDIKNEICNAAEFN 119

Query: 121 LSTVKDVAKHFIDKSLFSIGLTSQFAFSSSTSMLFNIEGHGEXXXXXXXXXXXXXXPNHD 180
           LST K VAKHFIDKSLFS GL SQFA S STS+LF +EGHGE               +HD
Sbjct: 120 LSTAKSVAKHFIDKSLFSYGLNSQFALSPSTSVLFGLEGHGEKEKHRKKVVFFQELSDHD 179

Query: 181 LTLEAAWPQLFVDHKGKYWDVPETXXXXXXXXXXXXGLRYHLGIHKNGGNPQAINATDSK 240
           LT+EAAWPQLFVDHKG+YWDVPE+            GLRY  G+HKN G+PQA NATDS 
Sbjct: 180 LTVEAAWPQLFVDHKGRYWDVPESISVDLASLVARRGLRYRFGMHKNNGSPQATNATDSD 239

Query: 241 PPLSLLPGLCAKAAFTYQKTKYLWRDGEVVEDLEEETRRVAPYDVRLQEPHAAVSGIIGS 300
            PLSLLPGLCAKA+ TY K KYLWR+ E     EEE + + P+D  L  PH AVSGIIGS
Sbjct: 240 TPLSLLPGLCAKASVTYDKIKYLWRNTET----EEEYKDLFPHDQGLMVPHEAVSGIIGS 295

Query: 301 SFASWIRNG-----SAEDSEVSTKSGRSRHNADLFGSVCYTFQHGKFTKDFGDLTRLDAR 355
           S ASWI NG     + ED  VS +  RSR NA++FGSVCYTFQ G+F+K FGDLTR+DAR
Sbjct: 296 SCASWIWNGKNLIDTGEDPAVSKRRKRSRFNAEIFGSVCYTFQQGRFSKKFGDLTRVDAR 355

Query: 356 LDISSVSALGKKIMNGFKSSTAADVNEQPSASPRLNLIFQQQVAGPVVFRADSRISLESF 415
           LDISS S L KKI+NGFKSS+ AD+ EQPSASPRLNLIFQQQVAGPVVFRADSRIS++S 
Sbjct: 356 LDISSASGLAKKILNGFKSSS-ADIIEQPSASPRLNLIFQQQVAGPVVFRADSRISIDSL 414

Query: 416 TRKHGINFEDFICSLNYSF----KFLESGKLVAWYSPKRKEGMVELRFYEF 462
           +RKHGI+ EDFICSLN+        +ESGK+VAWYSPKR EGMVELR YEF
Sbjct: 415 SRKHGISIEDFICSLNFYMDPNTSDMESGKIVAWYSPKRNEGMVELRLYEF 465


>Medtr2g035830.1 | pigment defective 320 protein | HC |
           chr2:15204496-15199089 | 20130731
          Length = 468

 Score =  254 bits (649), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 168/487 (34%), Positives = 249/487 (51%), Gaps = 46/487 (9%)

Query: 1   MAKLRTAIDSA-FWDLNIASPQSLDGWAKAVPGDPIPLDGSVASKALRPQQFSF---FKN 56
           M KLR  +D   FWDL+I++P++LDG A  VP DP+ L  S  ++  RP+Q  F   F N
Sbjct: 1   MRKLRWVMDGGGFWDLDISTPKTLDGSACPVPEDPLTLGLSRGTRLSRPRQLQFMQLFMN 60

Query: 57  NSFPLPVIPSFSPTSPKDLGSFALQSLLLRLTSHRWWLGVTGQFRPRKLITDIKNEITNA 116
                P+ P+FS   P+    F+LQ +L    S  W++ + GQF  +K ++ +K+     
Sbjct: 61  A----PLHPTFS--QPQ---GFSLQRVLSLPFSDNWFVFLLGQFNLQKFVSSVKSSDEKP 111

Query: 117 DEFDLSTVKDVAKHFIDKSLFSIGLTSQFAFSSSTSMLFNIEGHGEXXXXXXXXXXXXXX 176
             F  S +K+  +H   KSL+++GL S+F  +   ++LF ++ +                
Sbjct: 112 ARFS-SWLKNFGRHLQQKSLYALGLCSEFQLTPDDTLLFGLDSYDYTDKPRGKAVFHHKF 170

Query: 177 PNHDLTLEAAWPQLFVDHKGKYWDVPETXXXXXXXXXXX-XGLRYHLGIHKNGGNP---Q 232
           P+HDLT+EA +P LFVD  G YWDVP +                YHL  H N G+P   +
Sbjct: 171 PHHDLTVEAVYPGLFVDKIGNYWDVPLSMAVDLASLTTSDSSAGYHLSAHYNSGSPKQFE 230

Query: 233 AINATDSKPPLSLLPGLCAKAAFTYQKTKYLWRDGEVVEDLEEETRRVAPYDVRLQEPHA 292
           +I   + + P +LLPGL  K+ F+Y+K   +WR          + + + PYD+ L  P  
Sbjct: 231 SIQYENDRVPQTLLPGLAFKSVFSYRKNLDIWRSET------PKLKLIQPYDIFLSNPLL 284

Query: 293 AVSGIIGSSFASWIRNGSAE---DSEVSTKSG--------RSRHNADLFGSVCYTFQHGK 341
           + SG+IG++  ++    S     D +    SG        +S   AD+FGSV +T QHG 
Sbjct: 285 SASGMIGAAATAYFGENSTRAQIDDDGQQSSGLFLQAPGIKSSFLADIFGSVSFTAQHGN 344

Query: 342 FTKDFGDLTRLDARLDISSVSALGKKIMNGFKSSTAADVNEQP-------SASPRLNLIF 394
           F + F DL+R  ARLD  S    G K + G  S     +N Q        +  P   L  
Sbjct: 345 FQRLFLDLSRFQARLDFPS----GSKFLLGATSLAQDLLNSQKPNMEAVQAICPNATLSL 400

Query: 395 QQQVAGPVVFRADSRISLESFTRKHGINFEDFICSLNYSFKFLESGKLVAWYSPKRKEGM 454
           QQQ+ GP+ FR DS I+++    K  I  +D I ++ ++ + L S K VAW  PKR+E M
Sbjct: 401 QQQIVGPISFRVDSGIAIDLKNHKWPIQAQDPIYAVEWALQVLGSAKAVAWCCPKRQEFM 460

Query: 455 VELRFYE 461
           VELRFYE
Sbjct: 461 VELRFYE 467