Miyakogusa Predicted Gene

Lj3g3v0597310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0597310.1 Non Characterized Hit- tr|I1KJF7|I1KJF7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.89,0,SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,NULL; no description,Cyclin-like;
Cyclin-like,Cyclin-like;,CUFF.41002.1
         (206 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g081130.1 | cyclin p4 | HC | chr7:30934930-30933268 | 2013...   325   1e-89
Medtr8g007380.1 | cyclin p4 | HC | chr8:1499976-1501648 | 20130731    316   9e-87
Medtr2g088860.1 | cyclin p4 | HC | chr2:37475502-37474092 | 2013...   155   2e-38
Medtr7g094880.2 | cyclin p4 | HC | chr7:37891633-37894536 | 2013...   152   2e-37
Medtr7g094880.1 | cyclin p4 | HC | chr7:37892086-37894536 | 2013...   152   2e-37
Medtr4g028060.1 | cyclin p4 | HC | chr4:9659806-9657678 | 20130731    128   4e-30

>Medtr7g081130.1 | cyclin p4 | HC | chr7:30934930-30933268 |
           20130731
          Length = 203

 Score =  325 bits (834), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 163/206 (79%), Positives = 174/206 (84%), Gaps = 3/206 (1%)

Query: 1   MAELESPSVMPKVITFLSSLLERVAESNDQSQQLLQHNQKISVFHGLSRPNISIQSYLER 60
           MAELE+P+ MPK+I FLSSLL+RVAESND +QQLL+  QKISVF GL+ PNISIQ+YLER
Sbjct: 1   MAELENPNEMPKLIAFLSSLLKRVAESNDINQQLLE--QKISVFQGLTCPNISIQNYLER 58

Query: 61  IFKYANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAY 120
           IFKYANCSPSCFIVAYVYLDRFTQ+QPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAY
Sbjct: 59  IFKYANCSPSCFIVAYVYLDRFTQRQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAY 118

Query: 121 YAKVGGITKIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEMLQTQPLNFADSSLSL 180
           YAKVGGIT IEMN              NVTP TFQAYCVHLQ EM+  QPLNF DSSL L
Sbjct: 119 YAKVGGITTIEMNFLELDFLFGLGFHLNVTPNTFQAYCVHLQSEMMMIQPLNFTDSSLGL 178

Query: 181 GKSLKAHLCFNEGESSHQKQQQQLAV 206
           GKSL  H+CFNE ESSHQK QQQLAV
Sbjct: 179 GKSLNTHVCFNEDESSHQK-QQQLAV 203


>Medtr8g007380.1 | cyclin p4 | HC | chr8:1499976-1501648 | 20130731
          Length = 200

 Score =  316 bits (810), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 162/206 (78%), Positives = 172/206 (83%), Gaps = 6/206 (2%)

Query: 1   MAELESPSVMPKVITFLSSLLERVAESNDQSQQLLQHNQKISVFHGLSRPNISIQSYLER 60
           MAELESP +MPK+I FLSSLLERVAESND++Q    ++ KIS+FHGLSRPNISIQSYLER
Sbjct: 1   MAELESP-MMPKLINFLSSLLERVAESNDETQ----NHHKISIFHGLSRPNISIQSYLER 55

Query: 61  IFKYANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAY 120
           IFKYANCS SCFIVAYVYLDRFTQ QPSLPINSFNVHRLLITSVMVAAKFMDD+ YNNAY
Sbjct: 56  IFKYANCSSSCFIVAYVYLDRFTQTQPSLPINSFNVHRLLITSVMVAAKFMDDVCYNNAY 115

Query: 121 YAKVGGITKIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEMLQTQPLNFADSSLSL 180
           YAKVGGITK EMN              NVTP TFQAYCVHLQ+EMLQ QPL F DS+LSL
Sbjct: 116 YAKVGGITKTEMNFLELDFLFGLGFNLNVTPVTFQAYCVHLQREMLQMQPLVFEDSTLSL 175

Query: 181 GKSLKAHLCFNEGESSHQKQQQQLAV 206
            KSLKAHLC NE ESSHQ  QQQLAV
Sbjct: 176 AKSLKAHLCLNEDESSHQN-QQQLAV 200


>Medtr2g088860.1 | cyclin p4 | HC | chr2:37475502-37474092 |
           20130731
          Length = 233

 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 12/169 (7%)

Query: 10  MPKVITFLSSLLERVAESNDQ-----SQQLLQHN-------QKISVFHGLSRPNISIQSY 57
           +P+V+  LSS LE++   N++     +Q+L + N       + +++FHG+  P ISI  Y
Sbjct: 25  LPRVLWILSSTLEKLVSRNEKLVDELNQELDKLNNGSVRLGKSLNLFHGVRAPGISIPKY 84

Query: 58  LERIFKYANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYN 117
           LERI+KY NCSPSCF+V YVY+D  T K P   + S NVHRLL+TSVMVA+K +DD +YN
Sbjct: 85  LERIYKYTNCSPSCFVVGYVYIDMLTHKHPDSLVLSLNVHRLLVTSVMVASKMLDDEHYN 144

Query: 118 NAYYAKVGGITKIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEML 166
           NA YA+VGG++  E+N               V P  F++YC+HL+KEML
Sbjct: 145 NAVYARVGGVSNAELNKLELELLFLLDFKVMVCPRVFESYCLHLEKEML 193


>Medtr7g094880.2 | cyclin p4 | HC | chr7:37891633-37894536 |
           20130731
          Length = 218

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 110/168 (65%), Gaps = 1/168 (0%)

Query: 1   MAELESPSVMPKVITFLSSLLERVAESNDQSQQLLQHNQKISVFHGLSRPNISIQSYLER 60
           + +L+    +P+V++ LSSLLER  + N+   +       ++VFHGLS P +S++ Y++R
Sbjct: 21  LKDLDKGVGVPRVLSLLSSLLERSVQKNEMLVETEHIEDVVTVFHGLSAPTLSLRKYIDR 80

Query: 61  IFKYANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAY 120
           IFKY+ CSPSCF+VA++Y+DR  Q    + + S NVHRLLITS+M+AAKFMDD ++NNAY
Sbjct: 81  IFKYSGCSPSCFVVAHIYVDRLLQ-NTEIKLTSLNVHRLLITSIMLAAKFMDDAFFNNAY 139

Query: 121 YAKVGGITKIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEMLQT 168
           YA+VGG+   E+N               V+  TF  YC  L++E L+T
Sbjct: 140 YARVGGVKTCELNRLEMSFLFGIDFRLQVSVDTFHKYCWQLEEEGLET 187


>Medtr7g094880.1 | cyclin p4 | HC | chr7:37892086-37894536 |
           20130731
          Length = 233

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 110/168 (65%), Gaps = 1/168 (0%)

Query: 1   MAELESPSVMPKVITFLSSLLERVAESNDQSQQLLQHNQKISVFHGLSRPNISIQSYLER 60
           + +L+    +P+V++ LSSLLER  + N+   +       ++VFHGLS P +S++ Y++R
Sbjct: 36  LKDLDKGVGVPRVLSLLSSLLERSVQKNEMLVETEHIEDVVTVFHGLSAPTLSLRKYIDR 95

Query: 61  IFKYANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAY 120
           IFKY+ CSPSCF+VA++Y+DR  Q    + + S NVHRLLITS+M+AAKFMDD ++NNAY
Sbjct: 96  IFKYSGCSPSCFVVAHIYVDRLLQ-NTEIKLTSLNVHRLLITSIMLAAKFMDDAFFNNAY 154

Query: 121 YAKVGGITKIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEMLQT 168
           YA+VGG+   E+N               V+  TF  YC  L++E L+T
Sbjct: 155 YARVGGVKTCELNRLEMSFLFGIDFRLQVSVDTFHKYCWQLEEEGLET 202


>Medtr4g028060.1 | cyclin p4 | HC | chr4:9659806-9657678 | 20130731
          Length = 218

 Score =  128 bits (322), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 102/161 (63%), Gaps = 8/161 (4%)

Query: 11  PKVITFLSSLLER-VAES-----NDQSQQLLQHNQKISVFHGLSRPNISIQSYLERIFKY 64
           P VI  L+SL+ER +A +     N  S+ L + + KI  F     P+++IQSYLERIF+Y
Sbjct: 29  PLVINVLASLIERNMARAQRIVKNCSSRVLSKASTKI--FDCREIPDLTIQSYLERIFRY 86

Query: 65  ANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKV 124
               PS ++VAYVY+DRF Q      INS NVHRLLIT++MVA+K+++DM + N+Y+AKV
Sbjct: 87  TRAGPSVYVVAYVYIDRFCQNNLGFRINSRNVHRLLITTIMVASKYVEDMNFRNSYFAKV 146

Query: 125 GGITKIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEM 165
           GG+T  E+N              +V    F++YC HL++E+
Sbjct: 147 GGLTTSELNELELEFLFMMNFKLHVNVSVFESYCSHLEREV 187