Miyakogusa Predicted Gene

Lj3g3v0579150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0579150.1 tr|A9S1G4|A9S1G4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_162323,34.97,1e-16,seg,NULL,CUFF.40990.1
         (496 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g007155.1 | hypothetical protein | HC | chr8:1320545-13159...   704   0.0  
Medtr8g007155.2 | hypothetical protein | HC | chr8:1320545-13159...   698   0.0  
Medtr8g007155.3 | hypothetical protein | HC | chr8:1320545-13159...   546   e-155

>Medtr8g007155.1 | hypothetical protein | HC | chr8:1320545-1315964
           | 20130731
          Length = 488

 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/477 (74%), Positives = 384/477 (80%), Gaps = 19/477 (3%)

Query: 30  NPFTSLPFSSTFPKPCFTRVIAQAQKPNHNNKRGPKQGVRVKGNKENVWSFDNELAKMAA 89
           NP + L  S T PKP  T  I  AQK NHNN       +RVKGNKENVWS DNELAK   
Sbjct: 21  NPLSFLSLSPTLPKPSSTTRIITAQKSNHNNN----GSIRVKGNKENVWSVDNELAK--- 73

Query: 90  XXXXXXXXXXXXXXMVKTKRGKGGRVTVTGAMLVEVETVLQTQEPVIKPAWNTFASSLSG 149
                         + + K  K GRV VTGAML+EVETVLQTQEPVIKPAWNTFASSLSG
Sbjct: 74  --KEKKGRGRSKKVVKRNKSKKSGRVVVTGAMLMEVETVLQTQEPVIKPAWNTFASSLSG 131

Query: 150 IWKGVGAVFSPITAEMEPMEIGRKNENLYDCYTLTRIEEVPSLSGDRTSQIQRTVNWVTL 209
           IWKGVGAVFSPITAEMEPMEI  KNENLYDCYTL+RIE VPS S +RTSQIQR VNWVTL
Sbjct: 132 IWKGVGAVFSPITAEMEPMEISVKNENLYDCYTLSRIEAVPSHSDERTSQIQRKVNWVTL 191

Query: 210 NPYGET-QHIEGSKTAKDGTNDLNA----LTFANE---NNVLPTFGSFDFERSDVMEEDV 261
           NPYGE  Q +E +  AK+G+ DL A    L  + E   N VLPTF SFDF++SDVMEEDV
Sbjct: 192 NPYGEMPQQVEDNGIAKNGSGDLKAPIVGLRKSGEKITNRVLPTFESFDFKKSDVMEEDV 251

Query: 262 MRCEPGLVYFEDGSYSRGPVNIPVGEYDDSNYYITPTFKFEQCLVKGCHKRIRVVHTIEF 321
           M CEPGLVYFEDGSYSRGPV+I VG  DDS YYITPTFKFEQCLVKGCHKRIR+VHTIEF
Sbjct: 252 MGCEPGLVYFEDGSYSRGPVDISVGADDDSKYYITPTFKFEQCLVKGCHKRIRIVHTIEF 311

Query: 322 INGGSDIQIMRVAAYEETWDSPANVSDQSDMEFDLEPFSQRKRTKPSELTGSWKVFEVSA 381
           INGGS+IQIMRVA YEE W SP  V D SDM+FDL+PFSQRKRTKPSELTGSWKVFE+SA
Sbjct: 312 INGGSEIQIMRVAVYEEEWASPTCVDDMSDMDFDLKPFSQRKRTKPSELTGSWKVFEISA 371

Query: 382 TPVYSEDTKVEE--GNDAPYVYLCTENLKKRSFPESTNYFGEEERLDMQDVTMLWLPGGI 439
           TP+Y E+TK EE   N APYVYLCTE LKKRS P+S NYFGEEERLDMQD+T+LWLPGG+
Sbjct: 372 TPIYGEETKAEEEGSNAAPYVYLCTETLKKRSSPDSANYFGEEERLDMQDMTVLWLPGGV 431

Query: 440 TCYVDVNKDGVLCIGVGWYSDEGINLVMERDYGLDGKLKEVRSKCEVKRRWSNPPNL 496
           TCYVD+NKDG+LCIGVGWYSDEGINLVMERDYGLDGKLK+VR K E+KRRWSNPPN+
Sbjct: 432 TCYVDINKDGILCIGVGWYSDEGINLVMERDYGLDGKLKDVRWKSEMKRRWSNPPNV 488


>Medtr8g007155.2 | hypothetical protein | HC | chr8:1320545-1315964
           | 20130731
          Length = 495

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/484 (72%), Positives = 384/484 (79%), Gaps = 26/484 (5%)

Query: 30  NPFTSLPFSSTFPKPCFTRVIAQAQKPNHNNKRGPKQGVRVKGNKENVWSFDNELAKMAA 89
           NP + L  S T PKP  T  I  AQK NHNN       +RVKGNKENVWS DNELAK   
Sbjct: 21  NPLSFLSLSPTLPKPSSTTRIITAQKSNHNNN----GSIRVKGNKENVWSVDNELAK--- 73

Query: 90  XXXXXXXXXXXXXXMVKTKRGKGGRVTVTGAMLVEVETVLQTQ-------EPVIKPAWNT 142
                         + + K  K GRV VTGAML+EVETVLQTQ       EPVIKPAWNT
Sbjct: 74  --KEKKGRGRSKKVVKRNKSKKSGRVVVTGAMLMEVETVLQTQCMQRNKKEPVIKPAWNT 131

Query: 143 FASSLSGIWKGVGAVFSPITAEMEPMEIGRKNENLYDCYTLTRIEEVPSLSGDRTSQIQR 202
           FASSLSGIWKGVGAVFSPITAEMEPMEI  KNENLYDCYTL+RIE VPS S +RTSQIQR
Sbjct: 132 FASSLSGIWKGVGAVFSPITAEMEPMEISVKNENLYDCYTLSRIEAVPSHSDERTSQIQR 191

Query: 203 TVNWVTLNPYGET-QHIEGSKTAKDGTNDLNA----LTFANE---NNVLPTFGSFDFERS 254
            VNWVTLNPYGE  Q +E +  AK+G+ DL A    L  + E   N VLPTF SFDF++S
Sbjct: 192 KVNWVTLNPYGEMPQQVEDNGIAKNGSGDLKAPIVGLRKSGEKITNRVLPTFESFDFKKS 251

Query: 255 DVMEEDVMRCEPGLVYFEDGSYSRGPVNIPVGEYDDSNYYITPTFKFEQCLVKGCHKRIR 314
           DVMEEDVM CEPGLVYFEDGSYSRGPV+I VG  DDS YYITPTFKFEQCLVKGCHKRIR
Sbjct: 252 DVMEEDVMGCEPGLVYFEDGSYSRGPVDISVGADDDSKYYITPTFKFEQCLVKGCHKRIR 311

Query: 315 VVHTIEFINGGSDIQIMRVAAYEETWDSPANVSDQSDMEFDLEPFSQRKRTKPSELTGSW 374
           +VHTIEFINGGS+IQIMRVA YEE W SP  V D SDM+FDL+PFSQRKRTKPSELTGSW
Sbjct: 312 IVHTIEFINGGSEIQIMRVAVYEEEWASPTCVDDMSDMDFDLKPFSQRKRTKPSELTGSW 371

Query: 375 KVFEVSATPVYSEDTKVEE--GNDAPYVYLCTENLKKRSFPESTNYFGEEERLDMQDVTM 432
           KVFE+SATP+Y E+TK EE   N APYVYLCTE LKKRS P+S NYFGEEERLDMQD+T+
Sbjct: 372 KVFEISATPIYGEETKAEEEGSNAAPYVYLCTETLKKRSSPDSANYFGEEERLDMQDMTV 431

Query: 433 LWLPGGITCYVDVNKDGVLCIGVGWYSDEGINLVMERDYGLDGKLKEVRSKCEVKRRWSN 492
           LWLPGG+TCYVD+NKDG+LCIGVGWYSDEGINLVMERDYGLDGKLK+VR K E+KRRWSN
Sbjct: 432 LWLPGGVTCYVDINKDGILCIGVGWYSDEGINLVMERDYGLDGKLKDVRWKSEMKRRWSN 491

Query: 493 PPNL 496
           PPN+
Sbjct: 492 PPNV 495


>Medtr8g007155.3 | hypothetical protein | HC | chr8:1320545-1315964
           | 20130731
          Length = 342

 Score =  546 bits (1406), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 267/342 (78%), Positives = 293/342 (85%), Gaps = 10/342 (2%)

Query: 165 MEPMEIGRKNENLYDCYTLTRIEEVPSLSGDRTSQIQRTVNWVTLNPYGET-QHIEGSKT 223
           MEPMEI  KNENLYDCYTL+RIE VPS S +RTSQIQR VNWVTLNPYGE  Q +E +  
Sbjct: 1   MEPMEISVKNENLYDCYTLSRIEAVPSHSDERTSQIQRKVNWVTLNPYGEMPQQVEDNGI 60

Query: 224 AKDGTNDLNA----LTFANE---NNVLPTFGSFDFERSDVMEEDVMRCEPGLVYFEDGSY 276
           AK+G+ DL A    L  + E   N VLPTF SFDF++SDVMEEDVM CEPGLVYFEDGSY
Sbjct: 61  AKNGSGDLKAPIVGLRKSGEKITNRVLPTFESFDFKKSDVMEEDVMGCEPGLVYFEDGSY 120

Query: 277 SRGPVNIPVGEYDDSNYYITPTFKFEQCLVKGCHKRIRVVHTIEFINGGSDIQIMRVAAY 336
           SRGPV+I VG  DDS YYITPTFKFEQCLVKGCHKRIR+VHTIEFINGGS+IQIMRVA Y
Sbjct: 121 SRGPVDISVGADDDSKYYITPTFKFEQCLVKGCHKRIRIVHTIEFINGGSEIQIMRVAVY 180

Query: 337 EETWDSPANVSDQSDMEFDLEPFSQRKRTKPSELTGSWKVFEVSATPVYSEDTKVEE--G 394
           EE W SP  V D SDM+FDL+PFSQRKRTKPSELTGSWKVFE+SATP+Y E+TK EE   
Sbjct: 181 EEEWASPTCVDDMSDMDFDLKPFSQRKRTKPSELTGSWKVFEISATPIYGEETKAEEEGS 240

Query: 395 NDAPYVYLCTENLKKRSFPESTNYFGEEERLDMQDVTMLWLPGGITCYVDVNKDGVLCIG 454
           N APYVYLCTE LKKRS P+S NYFGEEERLDMQD+T+LWLPGG+TCYVD+NKDG+LCIG
Sbjct: 241 NAAPYVYLCTETLKKRSSPDSANYFGEEERLDMQDMTVLWLPGGVTCYVDINKDGILCIG 300

Query: 455 VGWYSDEGINLVMERDYGLDGKLKEVRSKCEVKRRWSNPPNL 496
           VGWYSDEGINLVMERDYGLDGKLK+VR K E+KRRWSNPPN+
Sbjct: 301 VGWYSDEGINLVMERDYGLDGKLKDVRWKSEMKRRWSNPPNV 342