Miyakogusa Predicted Gene

Lj3g3v0563910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0563910.1 tr|F4HRS2|F4HRS2_ARATH HEAT repeat-containing
protein OS=Arabidopsis thaliana GN=SWEETIE PE=4 SV=1,68.84,0,no
description,Armadillo-like helical; HYPOTHETICAL HEAT
DOMAIN-CONTAINING,NULL; seg,NULL; ARM repea,CUFF.40994.1
         (551 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g406950.1 | HEAT repeat 5B-like protein | HC | chr7:990593...   929   0.0  

>Medtr7g406950.1 | HEAT repeat 5B-like protein | HC |
            chr7:990593-1022109 | 20130731
          Length = 2481

 Score =  929 bits (2401), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/554 (83%), Positives = 488/554 (88%), Gaps = 3/554 (0%)

Query: 1    MLLLFGIIFASQDSGGMLSLVGIIEQCLKAGKKQHWRSASITNICVGLLAGFKALLSFRA 60
            MLL FGIIF+SQDSGGMLSL+G+IEQCLKAGKKQHWR++SITNICVGLLAGFK+LLSFR 
Sbjct: 759  MLLFFGIIFSSQDSGGMLSLLGVIEQCLKAGKKQHWRTSSITNICVGLLAGFKSLLSFRP 818

Query: 61   QTLGQEILGLIQSIFQSILAEGDICASQRRASSEGLGYLARFGNDIFTARMTRSLLGDLN 120
            QTLGQ+ILGL+QSIFQSIL EGDICASQRRAS E LGYLARFGNDIFTARMTRSLLGDLN
Sbjct: 819  QTLGQDILGLVQSIFQSILVEGDICASQRRASCEVLGYLARFGNDIFTARMTRSLLGDLN 878

Query: 121  GATDSYFAGSIALALGCIHRSAGGIALSTLVPATXXXXXXXXXXXXXNLQSWSMHGLLLT 180
            G TDSY+AGSIALALGCIHRSAGGIALSTLVPAT             +LQ WSMHGLLLT
Sbjct: 879  GVTDSYYAGSIALALGCIHRSAGGIALSTLVPATVSSISSLAKSLVPSLQIWSMHGLLLT 938

Query: 181  IEAAGLSFVSHVQATLSLAMDILLSDENGLVDVHQGVGRLINAIVTVLGPELVPGSIFFS 240
            IEAAGLSFVSHVQATLSLAM+ILLSDENGL DV QGVGRLINAIV VLGPELVPGSIFFS
Sbjct: 939  IEAAGLSFVSHVQATLSLAMEILLSDENGLADVQQGVGRLINAIVAVLGPELVPGSIFFS 998

Query: 241  RSKSAIAEISCWQETSTLLESARFTQQLVLFAPLAVSVHSHVQTLLSTLSSRQPNLRHLA 300
            RSKSAIAEISCWQETST+LESARFTQQLVLFAP AVSVHSHVQTLLSTLSSRQP LR LA
Sbjct: 999  RSKSAIAEISCWQETSTMLESARFTQQLVLFAPKAVSVHSHVQTLLSTLSSRQPTLRLLA 1058

Query: 301  VSTLRHLIEKDPASVIVEQIEDNLFFMLDEETDSEIGNLVQSTIMRLLYASCPSCPSHWI 360
            VSTLRHLIEKDPA+VIVEQIE+NLFFMLDEETDSEIGNLV++TIMRLLYASC SC SHWI
Sbjct: 1059 VSTLRHLIEKDPATVIVEQIEENLFFMLDEETDSEIGNLVRTTIMRLLYASCHSCTSHWI 1118

Query: 361  SVCRKVVLATSMRXXXXXXXXXXXXX---SRLNLGDEDNMVSGSNSSQIYQFQASIAAAN 417
            SVCRKVVLATS R                S LNL DE+NMVSGSNS+Q Y+FQAS  AAN
Sbjct: 1119 SVCRKVVLATSTRSSEINNNAENEFADGDSSLNLNDEENMVSGSNSTQNYKFQASTGAAN 1178

Query: 418  REKFLRYRTRLFAAECLSHLPDAVGRNPAHFDLLMARKENASGRASSDWLVLHLQELISL 477
            REK+LRYRTRLFAAECLSHLPDAVGR+ AHFDL +ARKE+ASG++S DWLVLHLQELISL
Sbjct: 1179 REKYLRYRTRLFAAECLSHLPDAVGRSRAHFDLFLARKEHASGKSSGDWLVLHLQELISL 1238

Query: 478  AYQISTIQFESMQPVGVSLLGTIVDKFEKVADPELPGHLLLEQYQAQVVSAVRXXXXXXX 537
            AYQISTIQFE+MQPVGVSLLGTIVDKFEK ADPELPGHLLLEQYQAQ+VSAVR       
Sbjct: 1239 AYQISTIQFENMQPVGVSLLGTIVDKFEKAADPELPGHLLLEQYQAQLVSAVRTTLDTSS 1298

Query: 538  XXXXXEAGLHLATK 551
                 EAGLHLATK
Sbjct: 1299 SPSLLEAGLHLATK 1312