Miyakogusa Predicted Gene

Lj3g3v0537470.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0537470.1 Non Characterized Hit- tr|Q23TE6|Q23TE6_TETTS
Putative uncharacterized protein OS=Tetrahymena
thermo,27.82,5e-18,IMMUNOGLOBULIN-BINDING PROTEIN 1,NULL;
IMMUNOGLOBULIN-BINDING PROTEIN 1,TAP42-like protein;
TAP42,TA,CUFF.40953.1
         (405 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g091640.1 | PP2A regulatory subunit TAP46-like protein | H...   577   e-165
Medtr1g050518.1 | PP2A regulatory subunit TAP46-like protein | H...   441   e-124

>Medtr3g091640.1 | PP2A regulatory subunit TAP46-like protein | HC |
           chr3:41711352-41715663 | 20130731
          Length = 404

 Score =  577 bits (1488), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 291/406 (71%), Positives = 321/406 (79%), Gaps = 3/406 (0%)

Query: 1   MGDTTRVEELPLPALFEQAREIHATATESGADQELVKKGYETLQKCEDMVNKLGLFSANE 60
           MG+  ++E++PLPALFEQAR+IHATATESGADQELVKKG E L KCE+MVN+LGLFSANE
Sbjct: 1   MGEM-KMEDMPLPALFEQARKIHATATESGADQELVKKGCEALNKCENMVNRLGLFSANE 59

Query: 61  TKEDISTGNLKYILVPFYLAELTEQIAQDDRIQIVKASQAKLKEFISFCEAMELVPKEEL 120
           TKEDIST +LKYILVP+YLAELTE+IA DDRI I+KASQAKLKEFISFCEAMELVPKEEL
Sbjct: 60  TKEDISTTDLKYILVPYYLAELTEKIAHDDRIPILKASQAKLKEFISFCEAMELVPKEEL 119

Query: 121 ESYTQGAPKSVADQXXXXXXXXXXXXXXESKLLEIKERKERRGRSTKAAALSTPVXXXXX 180
           ESY QG PK+VADQ              ESKLLEI ERKERRGRSTKAAALSTPV     
Sbjct: 120 ESYMQGVPKAVADQRAKKIARFKRQKAAESKLLEINERKERRGRSTKAAALSTPVEAGEE 179

Query: 181 XXXXXXXXXXXXXWNTTISLAICKALDXXXXXXXXXXXXXAVKDRQSKE-GDKEFSKEVL 239
                        WNT+ISLAICKA D             AVKDRQSKE G++EFSK+++
Sbjct: 180 EQLDDDGEEEREAWNTSISLAICKAFDLLEMIKKEEEMLSAVKDRQSKEDGNQEFSKDIM 239

Query: 240 DERAMKAEAWHRDSAVRAQYTKPSQPITCATFAQDVLEGRAKASQAHDHKHQPLIFGPAS 299
           DERA KAEAWHR++AVRAQYTKPS PITCATFAQDVLEGRA+ASQAH+HKHQPLIFGP S
Sbjct: 240 DERAKKAEAWHRNAAVRAQYTKPSPPITCATFAQDVLEGRAQASQAHEHKHQPLIFGPQS 299

Query: 300 LINGRFVTERERVAAQVFQPSHRMPTMSIEEAGLKEMEIMNKWQENNVRLMEEANSSWYK 359
           L+NG F  ER R+AAQVFQPSHRMPTMSIEEAGLKEMEIMN WQEN  R +EEANSSW+ 
Sbjct: 300 LVNGSFTNERARMAAQVFQPSHRMPTMSIEEAGLKEMEIMNTWQENTARFIEEANSSWHN 359

Query: 360 EKKSKPGXXXXXXXXXXXAQERARALDDWKDENPRGAGNSKLTPCG 405
           ++K KPG              RARALDDWKD+NPRGAGNSKLTPCG
Sbjct: 360 DRKFKPGEEEEDEDDDAAQD-RARALDDWKDDNPRGAGNSKLTPCG 404


>Medtr1g050518.1 | PP2A regulatory subunit TAP46-like protein | HC |
           chr1:19528724-19531081 | 20130731
          Length = 344

 Score =  441 bits (1135), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/337 (67%), Positives = 252/337 (74%), Gaps = 7/337 (2%)

Query: 69  NLKYILVPFYLAELTEQIAQDDRIQIVKASQAKLKEFISFCEAMELVPKEELESYTQGAP 128
           +L  + VP+YLAELTE+IA DDRI I+KASQAKLKEFISFCEAMELVPKE LESY     
Sbjct: 15  HLCDVQVPYYLAELTEKIAHDDRIPILKASQAKLKEFISFCEAMELVPKEGLESYI---- 70

Query: 129 KSVADQXXXXXXXXXXXXXXESKLLEIKERKERRGRSTKAAALSTPVXXXXXXXXXXXXX 188
             V DQ              ESKLLEI ERKERRGRSTKAAALSTPV             
Sbjct: 71  --VTDQRARKIARFKGQKAAESKLLEINERKERRGRSTKAAALSTPVEAGEEELLDDDGE 128

Query: 189 XXXXXWNTTISLAICKALDXXXXXXXXXXXXXAVKDRQSKEGDKEFSKEVLDERAMKAEA 248
                WNT+ISLAICKA D             AVKD QSK+GD+EFSK+V+D+RA KAEA
Sbjct: 129 EEREAWNTSISLAICKAFDLLEMIKKEEEMLSAVKDTQSKDGDQEFSKDVMDDRAKKAEA 188

Query: 249 WHRDSAVRAQYTKPSQPITCATFAQDVLEGRAKASQAHDHKHQPLIFGPASLINGRFVTE 308
           WHR++AVRAQYTKPS PITCATFAQDVLEGRA+ASQAHDHKHQPLIFGP SL+NG F  E
Sbjct: 189 WHRNAAVRAQYTKPSPPITCATFAQDVLEGRAQASQAHDHKHQPLIFGPQSLVNGSFTNE 248

Query: 309 RERVAAQVFQPSHRMPTMSIEEAGLKEMEIMNKWQENNVRLMEEANSSWYKEKKSKPGXX 368
           RER+AAQVFQPSHRMPTMSIEEAGLKEMEIMN WQEN  R +EEANSSW+ ++K KPG  
Sbjct: 249 RERMAAQVFQPSHRMPTMSIEEAGLKEMEIMNTWQENTARFIEEANSSWHNDRKFKPG-E 307

Query: 369 XXXXXXXXXAQERARALDDWKDENPRGAGNSKLTPCG 405
                    AQ+RARALDDWKD+NP+GAGNSKLTPCG
Sbjct: 308 EEEDEDDDAAQDRARALDDWKDDNPQGAGNSKLTPCG 344