Miyakogusa Predicted Gene

Lj3g3v0537460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0537460.1 Non Characterized Hit- tr|A5BAD7|A5BAD7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,48.25,2e-18,
,CUFF.40940.1
         (158 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g086340.1 | BEST plant protein match is: (TAIR:plant.1) pr...   147   5e-36
Medtr5g017580.1 | BEST plant protein match is: (TAIR:plant.1) pr...    86   2e-17

>Medtr4g086340.1 | BEST plant protein match is: (TAIR:plant.1)
           protein, putative | HC | chr4:33824413-33824944 |
           20130731
          Length = 135

 Score =  147 bits (370), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 96/136 (70%), Gaps = 21/136 (15%)

Query: 39  MDPRISFSHDFVVGQQPMKHENIYREAPVSSDFEFSVKNYSMIPADEVFSQGMLLPL--- 95
           MDPRISFS+DFVV QQ +KHENIYREAPVSSDFEFSVKNYSMI AD+ F +GMLLPL   
Sbjct: 1   MDPRISFSNDFVVSQQAIKHENIYREAPVSSDFEFSVKNYSMISADQAFFKGMLLPLSSE 60

Query: 96  -NKKVTLRDELLVNDDYGKDLPRLSKSYSSRWKERFGLKR-IGSKKEKHKSD-------- 145
            +KKVT+RDELL NDD   D P+  KS  SRWKER GLKR   SKK+K K          
Sbjct: 61  GSKKVTIRDELL-NDD---DSPKWPKSL-SRWKERLGLKRSSASKKDKEKQKMQKSAANQ 115

Query: 146 ---GFLQRDTTVNKAS 158
               F Q +TTVNK S
Sbjct: 116 TVPSFGQGETTVNKES 131


>Medtr5g017580.1 | BEST plant protein match is: (TAIR:plant.1)
           protein, putative | HC | chr5:6424270-6425510 | 20130731
          Length = 165

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 83/154 (53%), Gaps = 31/154 (20%)

Query: 10  VFSVSLYKGKHRCACSAISSKFCSTRHSTMDPRISFSHDFVVGQQPMKHENIYREA---P 66
           +++ S  KG H CA               M PRISFS+DFV  QQ MK +    +     
Sbjct: 7   MYNSSEQKGHHHCA--------------PMSPRISFSNDFVDLQQAMKQQERRSDTHIPV 52

Query: 67  VSSDFEFSVKNYSMIPADEVFSQGMLLPL--NK-----KVTLRDELLVNDD-YGKDLPRL 118
           VSSDFEFSV NYSM+ ADE+FS+G LLP   NK       TL+ ELL NDD Y     R 
Sbjct: 53  VSSDFEFSVTNYSMMSADELFSKGRLLPYKDNKIQRATTTTLKQELLHNDDEYDSFSLRP 112

Query: 119 SKSYSSRWKERFGLKR--IGSKKEKHKSDGFLQR 150
            K    RWK   GL++  IGSKK + KS+   QR
Sbjct: 113 PK---GRWKGLLGLRKSHIGSKKAE-KSEASDQR 142