Miyakogusa Predicted Gene

Lj3g3v0537380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0537380.1 tr|A9TR90|A9TR90_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_96103
,34.39,6e-17,seg,NULL,CUFF.40938.1
         (190 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g086255.1 | protein disulfide-isomerase SCO2-like protein,...   176   1e-44

>Medtr4g086255.1 | protein disulfide-isomerase SCO2-like protein,
           putative | HC | chr4:33771431-33772680 | 20130731
          Length = 201

 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 87/155 (56%), Positives = 105/155 (67%), Gaps = 11/155 (7%)

Query: 3   MFSTNASSSVFRCRASAGDLSPFPRLFHXXXXXXXXXXXXXXXXXXQTPDXXXXXXXXXX 62
           + +TNA S +FR RASAGD + FPRLFH                   +            
Sbjct: 2   LSTTNAISLIFRSRASAGDPTSFPRLFHSSLSLPTT-----------SGRLPAVETGGAA 50

Query: 63  XXXXXXNDGVRVKAKEKKWSRNRESYLVDDAEPLPLPMTHPDSSPVSREEIDKRLRCDPK 122
                 N+ ++VKAKE+KWSRNRE Y+ D+ EPLPLPMT+PDSSPVS +EID+RL+CDPK
Sbjct: 51  VRRAGGNEWMKVKAKERKWSRNREGYMFDNGEPLPLPMTYPDSSPVSSQEIDQRLQCDPK 110

Query: 123 TEDCKEVVYEWTGECRSCQGSRYMSYYNKRGKELT 157
            EDCKEVVYEWTG+CRSCQGS Y+SYYNKRGKE+T
Sbjct: 111 LEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGKEVT 145