Miyakogusa Predicted Gene
- Lj3g3v0514040.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0514040.1 Non Characterized Hit- tr|A5AP35|A5AP35_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.86,0.000000000000007,PsbQ,Photosystem II PsbQ, oxygen evolving
complex; seg,NULL; no description,NULL; Oxygen-evolving
en,CUFF.40966.1
(234 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g005175.1 | oxygen-evolving enhancer protein | HC | chr8:8... 297 7e-81
Medtr8g005175.2 | oxygen-evolving enhancer protein | HC | chr8:8... 253 8e-68
Medtr3g064070.1 | oxygen-evolving enhancer protein | HC | chr3:2... 66 2e-11
Medtr3g064070.2 | oxygen-evolving enhancer protein | HC | chr3:2... 66 2e-11
Medtr2g082580.1 | oxygen-evolving enhancer protein | HC | chr2:3... 61 8e-10
Medtr5g041910.1 | oxygen-evolving enhancer protein | HC | chr5:1... 61 1e-09
>Medtr8g005175.1 | oxygen-evolving enhancer protein | HC |
chr8:83317-85681 | 20130731
Length = 232
Score = 297 bits (760), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 164/236 (69%), Positives = 178/236 (75%), Gaps = 6/236 (2%)
Query: 1 MAQAMASMAG-LRGSS-QAVLEGSLQLSGXXXXXXXXXXXXXXXXXXXXXXXVRANQVPS 58
MAQAMASMAG LRGSS QAV+EGSLQLSG VRA Q
Sbjct: 1 MAQAMASMAGCLRGSSSQAVMEGSLQLSGSNRLNMLHGSNSNKVTRSSVTV-VRAQQ--- 56
Query: 59 EPQISRRAVMGLVAAGLATGSFVQAVLAEAKSIKVXXXXXXXXXXXXTLNSDEARDLELP 118
+ + SRRAV+GLVA GL + SFVQAVLAEA IKV TLNSDEARDL+LP
Sbjct: 57 QQESSRRAVIGLVATGLVSSSFVQAVLAEAIPIKVGGPPAPSGGLPGTLNSDEARDLKLP 116
Query: 119 LKERFFLQPLSPTEAAQRAKESAKEIVAVKKFIDQKAWPYVQNDLRLRASYLRYDLNTVI 178
LKERF+LQPL+PTEAA RAKESAKEIVA KKFIDQKAWPY+QNDLRLRA YLRYDLNT+I
Sbjct: 117 LKERFYLQPLTPTEAAARAKESAKEIVAAKKFIDQKAWPYLQNDLRLRAGYLRYDLNTII 176
Query: 179 SSKPKDQKQSLKELSAKLFQDISNLDYAAKVKSSPQAEKYYAEAVSTLNDVLGKLG 234
S+KPKDQK+SLKEL+ KLFQDI NLDYAAKVKS AEKYYA AVSTLNDVL K+G
Sbjct: 177 SAKPKDQKKSLKELTGKLFQDIDNLDYAAKVKSPSDAEKYYAIAVSTLNDVLSKIG 232
>Medtr8g005175.2 | oxygen-evolving enhancer protein | HC |
chr8:83599-85681 | 20130731
Length = 266
Score = 253 bits (647), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 146/236 (61%), Positives = 163/236 (69%), Gaps = 9/236 (3%)
Query: 1 MAQAMASMAG-LRGSS-QAVLEGSLQLSGXXXXXXXXXXXXXXXXXXXXXXXVRANQVPS 58
MAQAMASMAG LRGSS QAV+EGSLQLSG VRA Q
Sbjct: 1 MAQAMASMAGCLRGSSSQAVMEGSLQLSGSNRLNMLHGSNSNKVTRSSVTV-VRAQQ--- 56
Query: 59 EPQISRRAVMGLVAAGLATGSFVQAVLAEAKSIKVXXXXXXXXXXXXTLNSDEARDLELP 118
+ + SRRAV+GLVA GL + SFVQAVLAEA IKV TLNSDEARDL+LP
Sbjct: 57 QQESSRRAVIGLVATGLVSSSFVQAVLAEAIPIKVGGPPAPSGGLPGTLNSDEARDLKLP 116
Query: 119 LKERFFLQPLSPTEAAQRAKESAKEIVAVKKFIDQKAWPYVQNDLRLRASYLRYDLNTVI 178
LKERF+LQPL+PTEAA RAKESAKEIVA KKFIDQKAWPY+QNDLRLRA YLRYDLNT+I
Sbjct: 117 LKERFYLQPLTPTEAAARAKESAKEIVAAKKFIDQKAWPYLQNDLRLRAGYLRYDLNTII 176
Query: 179 SSKPKDQKQSLKELSAKLFQDISNLD---YAAKVKSSPQAEKYYAEAVSTLNDVLG 231
S+KPKDQK+SLKEL+ KLFQDI N+ Y KVK+ + A + N V G
Sbjct: 177 SAKPKDQKKSLKELTGKLFQDIDNVSIQYYIFKVKNCSCSTGCTAVLETADNHVFG 232
>Medtr3g064070.1 | oxygen-evolving enhancer protein | HC |
chr3:28811778-28813888 | 20130731
Length = 177
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 61/102 (59%)
Query: 132 EAAQRAKESAKEIVAVKKFIDQKAWPYVQNDLRLRASYLRYDLNTVISSKPKDQKQSLKE 191
EA + A++++ V+ ++ K+W Q +LR ++ L+ D+ T+I +KP ++ L+
Sbjct: 76 EAQNVVRVHAQDLLQVRDLLESKSWKIAQKELRRSSALLKKDIYTIIQNKPGSERSQLRV 135
Query: 192 LSAKLFQDISNLDYAAKVKSSPQAEKYYAEAVSTLNDVLGKL 233
L + LF +++ LDYAA+ + P+ + Y V +N++L ++
Sbjct: 136 LYSTLFNNVTRLDYAARDQDGPEVWQRYENIVVAVNEILSRI 177
>Medtr3g064070.2 | oxygen-evolving enhancer protein | HC |
chr3:28811890-28813945 | 20130731
Length = 177
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 61/102 (59%)
Query: 132 EAAQRAKESAKEIVAVKKFIDQKAWPYVQNDLRLRASYLRYDLNTVISSKPKDQKQSLKE 191
EA + A++++ V+ ++ K+W Q +LR ++ L+ D+ T+I +KP ++ L+
Sbjct: 76 EAQNVVRVHAQDLLQVRDLLESKSWKIAQKELRRSSALLKKDIYTIIQNKPGSERSQLRV 135
Query: 192 LSAKLFQDISNLDYAAKVKSSPQAEKYYAEAVSTLNDVLGKL 233
L + LF +++ LDYAA+ + P+ + Y V +N++L ++
Sbjct: 136 LYSTLFNNVTRLDYAARDQDGPEVWQRYENIVVAVNEILSRI 177
>Medtr2g082580.1 | oxygen-evolving enhancer protein | HC |
chr2:34656157-34654413 | 20130731
Length = 230
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 66/115 (57%)
Query: 119 LKERFFLQPLSPTEAAQRAKESAKEIVAVKKFIDQKAWPYVQNDLRLRASYLRYDLNTVI 178
+K++ ++ + + R K+ A +++A+ I Q YV+ LRL+++++ +D + VI
Sbjct: 109 IKKKLYMANIGAKGSVLRIKKYAFDLLAMADLIAQDTLNYVRRYLRLKSTFMYFDFDKVI 168
Query: 179 SSKPKDQKQSLKELSAKLFQDISNLDYAAKVKSSPQAEKYYAEAVSTLNDVLGKL 233
S+ P + KQ L +++ KLF + L+ A++ K+ + + Y E L DV+ ++
Sbjct: 169 SAVPVEDKQQLTDVANKLFDNFEKLEEASRNKNLLETQACYKETEVMLKDVMDRM 223
>Medtr5g041910.1 | oxygen-evolving enhancer protein | HC |
chr5:18404095-18401663 | 20130731
Length = 261
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 69/116 (59%)
Query: 119 LKERFFLQPLSPTEAAQRAKESAKEIVAVKKFIDQKAWPYVQNDLRLRASYLRYDLNTVI 178
+KE FF+ LSP +A R K++A+ + +++ ++ +W YV +RL+ +YL DL I
Sbjct: 146 MKEHFFMPGLSPEDAVLRIKQTAEGLHNLREMLETLSWRYVMFYIRLKQNYLEQDLRNAI 205
Query: 179 SSKPKDQKQSLKELSAKLFQDISNLDYAAKVKSSPQAEKYYAEAVSTLNDVLGKLG 234
++ P+++++ + + +L +++ +D + ++ YY + + ++++++ +L
Sbjct: 206 TTLPENRRKEYVKTANELVDNLTEMDRYVRTPKVYESYLYYEKTLKSIDELVAQLA 261