Miyakogusa Predicted Gene

Lj3g3v0509630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0509630.1 CUFF.40973.1
         (166 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g093680.2 | hypothetical protein | HC | chr4:37080543-3707...   260   4e-70
Medtr4g093680.1 | hypothetical protein | HC | chr4:37077617-3707...   254   3e-68

>Medtr4g093680.2 | hypothetical protein | HC |
           chr4:37080543-37070880 | 20130731
          Length = 166

 Score =  260 bits (665), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 127/166 (76%), Positives = 132/166 (79%)

Query: 1   MDETMKQFQXXXXXXXXXXXXXXXXRHQLVENDKLRNGNREALTVLRKKARTTKSSVPSP 60
           MDE MK FQ                RHQLVENDKLRNGNREALT LRKKARTT +SVPSP
Sbjct: 1   MDEKMKHFQKKLTELELEAEHLLLARHQLVENDKLRNGNREALTALRKKARTTTTSVPSP 60

Query: 61  FESIMKGVAGTNSRPLVQEVCTTCGNHDSSEQTWMMFPGTDLFARIPFHAVHTILETDQA 120
           F SIMKGV+GT SRPLVQEVCTTCGNHDS EQTW MFPGTDLF  IPFHA HTILETDQA
Sbjct: 61  FGSIMKGVSGTGSRPLVQEVCTTCGNHDSFEQTWTMFPGTDLFVGIPFHAAHTILETDQA 120

Query: 121 QLDFEAKKLQSTVKEKTYLISETGVLADKISPGVLKSLVALTDKAK 166
           +LDFEAKKLQS VK+K+YLISE G LAD ISPGVLKSLV L DK K
Sbjct: 121 ELDFEAKKLQSIVKDKSYLISEKGALADLISPGVLKSLVTLNDKPK 166


>Medtr4g093680.1 | hypothetical protein | HC |
           chr4:37077617-37071202 | 20130731
          Length = 162

 Score =  254 bits (648), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 124/162 (76%), Positives = 129/162 (79%)

Query: 5   MKQFQXXXXXXXXXXXXXXXXRHQLVENDKLRNGNREALTVLRKKARTTKSSVPSPFESI 64
           MK FQ                RHQLVENDKLRNGNREALT LRKKARTT +SVPSPF SI
Sbjct: 1   MKHFQKKLTELELEAEHLLLARHQLVENDKLRNGNREALTALRKKARTTTTSVPSPFGSI 60

Query: 65  MKGVAGTNSRPLVQEVCTTCGNHDSSEQTWMMFPGTDLFARIPFHAVHTILETDQAQLDF 124
           MKGV+GT SRPLVQEVCTTCGNHDS EQTW MFPGTDLF  IPFHA HTILETDQA+LDF
Sbjct: 61  MKGVSGTGSRPLVQEVCTTCGNHDSFEQTWTMFPGTDLFVGIPFHAAHTILETDQAELDF 120

Query: 125 EAKKLQSTVKEKTYLISETGVLADKISPGVLKSLVALTDKAK 166
           EAKKLQS VK+K+YLISE G LAD ISPGVLKSLV L DK K
Sbjct: 121 EAKKLQSIVKDKSYLISEKGALADLISPGVLKSLVTLNDKPK 162